RNA–Protein interactions for RNA: ENST00000478188.5

POLR2B-208, Transcript of RNA polymerase II subunit B, humanhuman

TSL 2

Gene POLR2B, Length 3,093 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2B-208ENST00000478188 PCDHGB2Q9Y5G2 931 aa4.3□□□□□ -1.72
POLR2B-208ENST00000478188 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.3□□□□□ -1.721e-7■■□□□ 11.9
POLR2B-208ENST00000478188 FADS3Q9Y5Q0 445 aa4.3□□□□□ -1.72
POLR2B-208ENST00000478188 DCDC2BA2VCK2 349 aa4.3□□□□□ -1.72
POLR2B-208ENST00000478188 VILLO15195 856 aa4.3□□□□□ -1.72
POLR2B-208ENST00000478188 LZTS3O60299 673 aaPredicted RBP4.3□□□□□ -1.72
POLR2B-208ENST00000478188 MAFKO60675 156 aa4.3□□□□□ -1.72
POLR2B-208ENST00000478188 RAMP2O60895 175 aa4.3□□□□□ -1.72
POLR2B-208ENST00000478188 DNTTP04053 509 aa4.3□□□□□ -1.72
POLR2B-208ENST00000478188 ERCC2P18074 760 aa4.3□□□□□ -1.72
POLR2B-208ENST00000478188 GKP32189 559 aa4.3□□□□□ -1.72
POLR2B-208ENST00000478188 ZNF135P52742 658 aaPredicted RBP4.3□□□□□ -1.72
POLR2B-208ENST00000478188 NXPH1P58417 271 aa4.3□□□□□ -1.72
POLR2B-208ENST00000478188 RALGDSQ12967 914 aa4.3□□□□□ -1.72
POLR2B-208ENST00000478188 PAFAH1B3Q15102 231 aaKnown RBP4.3□□□□□ -1.72
POLR2B-208ENST00000478188 AASDHQ4L235 1098 aaPredicted RBP4.3□□□□□ -1.72
POLR2B-208ENST00000478188 ATP13A4Q4VNC1 1196 aa4.3□□□□□ -1.72
POLR2B-208ENST00000478188 RABEPKQ7Z6M1 372 aa4.3□□□□□ -1.72
POLR2B-208ENST00000478188 ABI3BPQ7Z7G0 1075 aa4.3□□□□□ -1.72
POLR2B-208ENST00000478188 FAM124AQ86V42 546 aa4.3□□□□□ -1.72
POLR2B-208ENST00000478188 CCDC117Q8IWD4 279 aaPredicted RBP4.3□□□□□ -1.72
POLR2B-208ENST00000478188 PGBD3Q8N328 593 aa4.3□□□□□ -1.72
POLR2B-208ENST00000478188 HDDC3Q8N4P3 179 aa4.3□□□□□ -1.72
POLR2B-208ENST00000478188 MINDY1Q8N5J2 469 aa4.3□□□□□ -1.72
POLR2B-208ENST00000478188 NETO2Q8NC67 525 aa4.3□□□□□ -1.72
POLR2B-208ENST00000478188 RNF214Q8ND24 703 aa4.3□□□□□ -1.72
POLR2B-208ENST00000478188 OR8K1Q8NGG5 319 aa4.3□□□□□ -1.72
POLR2B-208ENST00000478188 PCDH19Q8TAB3 1148 aa4.3□□□□□ -1.72
POLR2B-208ENST00000478188 CASKIN2Q8WXE0 1202 aa4.3□□□□□ -1.72
POLR2B-208ENST00000478188 ASB12Q8WXK4 309 aa4.3□□□□□ -1.72
POLR2B-208ENST00000478188 TADA1Q96BN2 335 aa4.3□□□□□ -1.72
POLR2B-208ENST00000478188 CPEB1Q9BZB8 566 aaKnown RBP4.3□□□□□ -1.72
POLR2B-208ENST00000478188 BTBD1Q9H0C5 482 aa4.3□□□□□ -1.72
POLR2B-208ENST00000478188 TMEM9BQ9NQ34 198 aa4.3□□□□□ -1.72
POLR2B-208ENST00000478188 SEPT11Q9NVA2 429 aaKnown RBP4.3□□□□□ -1.72
POLR2B-208ENST00000478188 RCOR3Q9P2K3 495 aaPredicted RBP4.3□□□□□ -1.72
POLR2B-208ENST00000478188 DKK3Q9UBP4 350 aa4.3□□□□□ -1.72
POLR2B-208ENST00000478188 SNX11Q9Y5W9 270 aa4.3□□□□□ -1.72
POLR2B-208ENST00000478188 ZFC3H1O60293 1989 aaKnown RBP4.3□□□□□ -1.72
POLR2B-208ENST00000478188 ARID1BQ8NFD5 2236 aaPredicted RBP4.3□□□□□ -1.72
POLR2B-208ENST00000478188 LY6G6EA0A0G2JKS1 128 aa4.3□□□□□ -1.72
POLR2B-208ENST00000478188 GOLGA6L19H0YKK7 550 aa4.3□□□□□ -1.72
POLR2B-208ENST00000478188 RAD51BO15315 384 aa4.3□□□□□ -1.72
POLR2B-208ENST00000478188 BCAT2O15382 392 aaPredicted RBP4.3□□□□□ -1.72
POLR2B-208ENST00000478188 CBFA2T2O43439 604 aa4.3□□□□□ -1.72
POLR2B-208ENST00000478188 MFSD11O43934 449 aa4.3□□□□□ -1.72
POLR2B-208ENST00000478188 ADRB3P13945 408 aa4.3□□□□□ -1.72
POLR2B-208ENST00000478188 EPHB2P29323 1055 aa4.3□□□□□ -1.72
POLR2B-208ENST00000478188 PAPOLAP51003 745 aaKnown RBP4.3□□□□□ -1.72
POLR2B-208ENST00000478188 ADKP55263 362 aaKnown RBP4.3□□□□□ -1.72
POLR2B-208ENST00000478188 ST8SIA6P61647 398 aa4.3□□□□□ -1.72
POLR2B-208ENST00000478188 GALNT2Q10471 571 aa4.3□□□□□ -1.72
POLR2B-208ENST00000478188 SLC10A2Q12908 348 aaPredicted RBP4.3□□□□□ -1.72
POLR2B-208ENST00000478188 PIGHQ14442 188 aaPredicted RBP4.3□□□□□ -1.72
POLR2B-208ENST00000478188 KIF19Q2TAC6 998 aa4.3□□□□□ -1.72
POLR2B-208ENST00000478188 TTC31Q49AM3 519 aaPredicted RBP4.3□□□□□ -1.72
POLR2B-208ENST00000478188 WDR45BQ5MNZ6 344 aa4.3□□□□□ -1.72
POLR2B-208ENST00000478188 ATXN7L2Q5T6C5 722 aaPredicted RBP4.3□□□□□ -1.72
POLR2B-208ENST00000478188 N4BP2L1Q5TBK1 243 aaPredicted RBP4.3□□□□□ -1.72
POLR2B-208ENST00000478188 VSIG1Q86XK7 387 aa4.3□□□□□ -1.72
POLR2B-208ENST00000478188 OR2AP1Q8NGE2 309 aa4.3□□□□□ -1.72
POLR2B-208ENST00000478188 ZNF564Q8TBZ8 553 aaPredicted RBP4.3□□□□□ -1.72
POLR2B-208ENST00000478188 HCAR2Q8TDS4 363 aa4.3□□□□□ -1.72
POLR2B-208ENST00000478188 CPLX3Q8WVH0 158 aa4.3□□□□□ -1.72
POLR2B-208ENST00000478188 OLFM3Q96PB7 478 aa4.3□□□□□ -1.72
POLR2B-208ENST00000478188 LENG8Q96PV6 779 aaPredicted RBP4.3□□□□□ -1.72
POLR2B-208ENST00000478188 NHEJ1Q9H9Q4 299 aaPredicted RBP4.3□□□□□ -1.72
POLR2B-208ENST00000478188 SPTLC3Q9NUV7 552 aa4.3□□□□□ -1.72
POLR2B-208ENST00000478188 UVRAGQ9P2Y5 699 aa4.3□□□□□ -1.72
POLR2B-208ENST00000478188 MYO1AQ9UBC5 1043 aa4.3□□□□□ -1.72
POLR2B-208ENST00000478188 PCSK1NQ9UHG2 260 aa4.3□□□□□ -1.72
POLR2B-208ENST00000478188 PCOLCE2Q9UKZ9 415 aa4.3□□□□□ -1.72
POLR2B-208ENST00000478188 INTUQ9ULD6 942 aa4.3□□□□□ -1.72
POLR2B-208ENST00000478188 BTBD3Q9Y2F9 522 aa4.3□□□□□ -1.72
POLR2B-208ENST00000478188 U3KQA8 63 aa4.3□□□□□ -1.72
POLR2B-208ENST00000478188 A0A1B0GVT2 93 aa4.29□□□□□ -1.72
POLR2B-208ENST00000478188 ZSCAN5CA6NGD5 496 aaPredicted RBP4.29□□□□□ -1.72
POLR2B-208ENST00000478188 CBX4O00257 560 aa4.29□□□□□ -1.72
POLR2B-208ENST00000478188 EEF2KO00418 725 aaKnown RBP4.29□□□□□ -1.72
POLR2B-208ENST00000478188 HTRA2O43464 458 aaPredicted RBP4.29□□□□□ -1.72
POLR2B-208ENST00000478188 FZD6O60353 706 aa4.29□□□□□ -1.72
POLR2B-208ENST00000478188 RNASEH2AO75792 299 aaKnown RBP4.29□□□□□ -1.72
POLR2B-208ENST00000478188 CDC25BP30305 580 aa4.29□□□□□ -1.72
POLR2B-208ENST00000478188 ETFBP38117 255 aa4.29□□□□□ -1.72
POLR2B-208ENST00000478188 PTGIRP43119 386 aa4.29□□□□□ -1.72
POLR2B-208ENST00000478188 TPI1P60174 286 aa4.29□□□□□ -1.72
POLR2B-208ENST00000478188 RACK1P63244 317 aaKnown RBP4.29□□□□□ -1.72
POLR2B-208ENST00000478188 TPM4P67936 248 aa4.29□□□□□ -1.72
POLR2B-208ENST00000478188 IL10RBQ08334 325 aa4.29□□□□□ -1.72
POLR2B-208ENST00000478188 SLC14A1Q13336 389 aa4.29□□□□□ -1.72
POLR2B-208ENST00000478188 POLD3Q15054 466 aaPredicted RBP4.29□□□□□ -1.72
POLR2B-208ENST00000478188 SMTNL2Q2TAL5 461 aa4.29□□□□□ -1.72
POLR2B-208ENST00000478188 MYLK3Q32MK0 819 aa4.29□□□□□ -1.72
POLR2B-208ENST00000478188 TMEM52BQ4KMG9 183 aa4.29□□□□□ -1.72
POLR2B-208ENST00000478188 TDRD12Q587J7 1177 aaKnown RBP4.29□□□□□ -1.72
POLR2B-208ENST00000478188 PPM1JQ5JR12 505 aa4.29□□□□□ -1.72
POLR2B-208ENST00000478188 CCDC122Q5T0U0 273 aa4.29□□□□□ -1.72
POLR2B-208ENST00000478188 SEL1L3Q68CR1 1132 aa4.29□□□□□ -1.72
POLR2B-208ENST00000478188 SLC9A4Q6AI14 798 aa4.29□□□□□ -1.72
POLR2B-208ENST00000478188 NAPEPLDQ6IQ20 393 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms