RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 PPP3CAQ08209 521 aa12.79□□□□□ -0.36
RTFDC1-207ENST00000477573 EPC2Q52LR7 807 aa12.79□□□□□ -0.36
RTFDC1-207ENST00000477573 KRT39Q6A163 491 aa12.79□□□□□ -0.36
RTFDC1-207ENST00000477573 GJB7Q6PEY0 223 aa12.79□□□□□ -0.36
RTFDC1-207ENST00000477573 SLC22A16Q86VW1 577 aa12.79□□□□□ -0.36
RTFDC1-207ENST00000477573 CBWD2Q8IUF1 395 aa12.79□□□□□ -0.36
RTFDC1-207ENST00000477573 ABRAQ8N0Z2 381 aa12.79□□□□□ -0.36
RTFDC1-207ENST00000477573 SLC35G2Q8TBE7 412 aa12.79□□□□□ -0.36
RTFDC1-207ENST00000477573 GRIN3AQ8TCU5 1115 aa12.79□□□□□ -0.36
RTFDC1-207ENST00000477573 GRK7Q8WTQ7 553 aa12.79□□□□□ -0.36
RTFDC1-207ENST00000477573 CCDC124Q96CT7 223 aaKnown RBP12.79□□□□□ -0.36
RTFDC1-207ENST00000477573 TNIP3Q96KP6 325 aa12.79□□□□□ -0.36
RTFDC1-207ENST00000477573 SPATA33Q96N06 139 aa12.79□□□□□ -0.36
RTFDC1-207ENST00000477573 CITED4Q96RK1 184 aa12.79□□□□□ -0.36
RTFDC1-207ENST00000477573 TMEM8AQ9HCN3 771 aa12.79□□□□□ -0.36
RTFDC1-207ENST00000477573 PTPN22Q9Y2R2 807 aa12.79□□□□□ -0.36
RTFDC1-207ENST00000477573 FAM237BA0A1B0GVD1 139 aa12.79□□□□□ -0.36
RTFDC1-207ENST00000477573 H0Y858 1186 aa12.79□□□□□ -0.36
RTFDC1-207ENST00000477573 PLK4O00444 970 aa12.79□□□□□ -0.36
RTFDC1-207ENST00000477573 ADRB2P07550 413 aa12.79□□□□□ -0.36
RTFDC1-207ENST00000477573 TXNP10599 105 aaKnown RBP12.79□□□□□ -0.36
RTFDC1-207ENST00000477573 MTHFD1P11586 935 aaKnown RBP12.79□□□□□ -0.36
RTFDC1-207ENST00000477573 GLRA2P23416 452 aa12.79□□□□□ -0.36
RTFDC1-207ENST00000477573 GPLD1P80108 840 aa12.79□□□□□ -0.36
RTFDC1-207ENST00000477573 CYP24A1Q07973 514 aa12.79□□□□□ -0.36
RTFDC1-207ENST00000477573 BST2Q10589 180 aaKnown RBP12.79□□□□□ -0.36
RTFDC1-207ENST00000477573 PMS2P3Q13401 168 aa12.79□□□□□ -0.36
RTFDC1-207ENST00000477573 FAM26DQ5JW98 314 aa12.79□□□□□ -0.36
RTFDC1-207ENST00000477573 C11orf63Q6NUN7 778 aa12.79□□□□□ -0.36
RTFDC1-207ENST00000477573 MRPL10Q7Z7H8 261 aaKnown RBP12.79□□□□□ -0.36
RTFDC1-207ENST00000477573 PCGF5Q86SE9 256 aa12.79□□□□□ -0.36
RTFDC1-207ENST00000477573 FBXO16Q8IX29 292 aaPredicted RBP12.79□□□□□ -0.36
RTFDC1-207ENST00000477573 GALNT12Q8IXK2 581 aa12.79□□□□□ -0.36
RTFDC1-207ENST00000477573 PARP8Q8N3A8 854 aa12.79□□□□□ -0.36
RTFDC1-207ENST00000477573 LMO3Q8TAP4 145 aa12.79□□□□□ -0.36
RTFDC1-207ENST00000477573 PNPT1Q8TCS8 783 aaKnown RBP12.79□□□□□ -0.36
RTFDC1-207ENST00000477573 MS4A4AQ96JQ5 239 aa12.79□□□□□ -0.36
RTFDC1-207ENST00000477573 TMEM117Q9H0C3 514 aa12.79□□□□□ -0.36
RTFDC1-207ENST00000477573 R3HDMLQ9H3Y0 253 aa12.79□□□□□ -0.36
RTFDC1-207ENST00000477573 TMEM134Q9H6X4 195 aa12.79□□□□□ -0.36
RTFDC1-207ENST00000477573 TRIM39Q9HCM9 518 aa12.79□□□□□ -0.36
RTFDC1-207ENST00000477573 UBE2TQ9NPD8 197 aaPredicted RBP12.79□□□□□ -0.36
RTFDC1-207ENST00000477573 DTLQ9NZJ0 730 aa12.79□□□□□ -0.36
RTFDC1-207ENST00000477573 DIMT1Q9UNQ2 313 aaKnown RBP12.79□□□□□ -0.36
RTFDC1-207ENST00000477573 PRSS51A0A1B0GVH4 220 aa12.78□□□□□ -0.36
RTFDC1-207ENST00000477573 SERPINI2O75830 405 aa12.78□□□□□ -0.36
RTFDC1-207ENST00000477573 ALDH1A2O94788 518 aa12.78□□□□□ -0.36
RTFDC1-207ENST00000477573 CDK14O94921 469 aa12.78□□□□□ -0.36
RTFDC1-207ENST00000477573 MFN2O95140 757 aa12.78□□□□□ -0.36
RTFDC1-207ENST00000477573 ARIH2O95376 493 aa12.78□□□□□ -0.36
RTFDC1-207ENST00000477573 PIGRP01833 764 aa12.78□□□□□ -0.36
RTFDC1-207ENST00000477573 HNF1BP35680 557 aa12.78□□□□□ -0.36
RTFDC1-207ENST00000477573 ABCG1P45844 678 aa12.78□□□□□ -0.36
RTFDC1-207ENST00000477573 CLCNKBP51801 687 aa12.78□□□□□ -0.36
RTFDC1-207ENST00000477573 EFNA5P52803 228 aa12.78□□□□□ -0.36
RTFDC1-207ENST00000477573 GALCP54803 685 aa12.78□□□□□ -0.36
RTFDC1-207ENST00000477573 CDH15P55291 814 aa12.78□□□□□ -0.36
RTFDC1-207ENST00000477573 IFITM3Q01628 133 aa12.78□□□□□ -0.36
RTFDC1-207ENST00000477573 MXD4Q14582 209 aaPredicted RBP12.78□□□□□ -0.36
RTFDC1-207ENST00000477573 TAF12Q16514 161 aa12.78□□□□□ -0.36
RTFDC1-207ENST00000477573 ALFQ53S48 1182 aa12.78□□□□□ -0.36
RTFDC1-207ENST00000477573 C1orf220Q5T0J3 134 aa12.78□□□□□ -0.36
RTFDC1-207ENST00000477573 IER5Q5VY09 327 aa12.78□□□□□ -0.36
RTFDC1-207ENST00000477573 SLC39A4Q6P5W5 647 aa12.78□□□□□ -0.36
RTFDC1-207ENST00000477573 HDDC2Q7Z4H3 204 aa12.78□□□□□ -0.36
RTFDC1-207ENST00000477573 LRRTM3Q86VH5 581 aa12.78□□□□□ -0.36
RTFDC1-207ENST00000477573 CADM2Q8N3J6 435 aa12.78□□□□□ -0.36
RTFDC1-207ENST00000477573 CCNYL1Q8N7R7 359 aa12.78□□□□□ -0.36
RTFDC1-207ENST00000477573 HIPK4Q8NE63 616 aa12.78□□□□□ -0.36
RTFDC1-207ENST00000477573 LRRC20Q8TCA0 184 aa12.78□□□□□ -0.36
RTFDC1-207ENST00000477573 SLC44A1Q8WWI5 657 aa12.78□□□□□ -0.36
RTFDC1-207ENST00000477573 SGK3Q96BR1 496 aa12.78□□□□□ -0.36
RTFDC1-207ENST00000477573 SERPINI1Q99574 410 aa12.78□□□□□ -0.36
RTFDC1-207ENST00000477573 OR51B5Q9H339 312 aa12.78□□□□□ -0.36
RTFDC1-207ENST00000477573 STN1Q9H668 368 aaKnown RBP12.78□□□□□ -0.36
RTFDC1-207ENST00000477573 ERVMER34-1Q9H9K5 563 aa12.78□□□□□ -0.36
RTFDC1-207ENST00000477573 RPRD1BQ9NQG5 326 aaKnown RBP12.78□□□□□ -0.36
RTFDC1-207ENST00000477573 ZC4H2Q9NQZ6 224 aa12.78□□□□□ -0.36
RTFDC1-207ENST00000477573 TOR4AQ9NXH8 423 aa12.78□□□□□ -0.36
RTFDC1-207ENST00000477573 MORF4L1Q9UBU8 362 aa12.78□□□□□ -0.36
RTFDC1-207ENST00000477573 NXF1Q9UBU9 619 aaKnown RBP12.78□□□□□ -0.36
RTFDC1-207ENST00000477573 AJAP1Q9UKB5 411 aaPredicted RBP12.78□□□□□ -0.36
RTFDC1-207ENST00000477573 VWA7Q9Y334 891 aa12.78□□□□□ -0.36
RTFDC1-207ENST00000477573 CACNG2Q9Y698 323 aa12.78□□□□□ -0.36
RTFDC1-207ENST00000477573 STON1Q9Y6Q2 735 aa12.78□□□□□ -0.36
RTFDC1-207ENST00000477573 ATF2P15336 505 aa12.77□□□□□ -0.36
RTFDC1-207ENST00000477573 RACK1P63244 317 aaKnown RBP12.77□□□□□ -0.36
RTFDC1-207ENST00000477573 CYP4F2P78329 520 aa12.77□□□□□ -0.36
RTFDC1-207ENST00000477573 CENPCQ03188 943 aa12.77□□□□□ -0.36
RTFDC1-207ENST00000477573 CYP4F3Q08477 520 aa12.77□□□□□ -0.36
RTFDC1-207ENST00000477573 HSDL1Q3SXM5 330 aa12.77□□□□□ -0.36
RTFDC1-207ENST00000477573 YIF1BQ5BJH7 314 aa12.77□□□□□ -0.36
RTFDC1-207ENST00000477573 RALGPS1Q5JS13 557 aa12.77□□□□□ -0.36
RTFDC1-207ENST00000477573 C6orf132Q5T0Z8 1188 aa12.77□□□□□ -0.36
RTFDC1-207ENST00000477573 ARMCX2Q7L311 632 aa12.77□□□□□ -0.36
RTFDC1-207ENST00000477573 TAS1R3Q7RTX0 852 aa12.77□□□□□ -0.36
RTFDC1-207ENST00000477573 SLC13A5Q86YT5 568 aaPredicted RBP12.77□□□□□ -0.36
RTFDC1-207ENST00000477573 SHKBP1Q8TBC3 707 aa12.77□□□□□ -0.36
RTFDC1-207ENST00000477573 TCP10LQ8TDR4 215 aa12.77□□□□□ -0.36
RTFDC1-207ENST00000477573 ZNF578Q96N58 590 aaPredicted RBP12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms