RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, human

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTCD3-212	ENST00000477520	RNF169	Q8NCN4	708 aa		4.79	□□□□□ -1.64
PTCD3-212	ENST00000477520	AGBL3	Q8NEM8	1001 aa		4.79	□□□□□ -1.64
PTCD3-212	ENST00000477520	BEST2	Q8NFU1	509 aa		4.79	□□□□□ -1.64
PTCD3-212	ENST00000477520	SLC35G2	Q8TBE7	412 aa		4.79	□□□□□ -1.64
PTCD3-212	ENST00000477520	TBC1D15	Q8TC07	691 aa		4.79	□□□□□ -1.64
PTCD3-212	ENST00000477520	PPP4R1	Q8TF05	950 aa		4.79	□□□□□ -1.64
PTCD3-212	ENST00000477520	U2AF1L4	Q8WU68	220 aa	Known RBP	4.79	□□□□□ -1.64
PTCD3-212	ENST00000477520	OSCP1	Q8WVF1	389 aa		4.79	□□□□□ -1.64
PTCD3-212	ENST00000477520	TRIB2	Q92519	343 aa		4.79	□□□□□ -1.64
PTCD3-212	ENST00000477520	GLG1	Q92896	1179 aa		4.79	□□□□□ -1.64
PTCD3-212	ENST00000477520	PEX13	Q92968	403 aa		4.79	□□□□□ -1.64
PTCD3-212	ENST00000477520	TAMM41	Q96BW9	452 aa		4.79	□□□□□ -1.64
PTCD3-212	ENST00000477520	ISOC1	Q96CN7	298 aa		4.79	□□□□□ -1.64
PTCD3-212	ENST00000477520	RMND5B	Q96G75	393 aa	Predicted RBP	4.79	□□□□□ -1.64
PTCD3-212	ENST00000477520	ZNF486	Q96H40	463 aa	Predicted RBP	4.79	□□□□□ -1.64
PTCD3-212	ENST00000477520	APOPT1	Q96IL0	206 aa		4.79	□□□□□ -1.64
PTCD3-212	ENST00000477520	ZSWIM1	Q9BR11	485 aa		4.79	□□□□□ -1.64
PTCD3-212	ENST00000477520	C11orf84	Q9BUA3	381 aa	Predicted RBP	4.79	□□□□□ -1.64
PTCD3-212	ENST00000477520	FRMD8	Q9BZ67	464 aa	Predicted RBP	4.79	□□□□□ -1.64
PTCD3-212	ENST00000477520	KLHL25	Q9H0H3	589 aa		4.79	□□□□□ -1.64
PTCD3-212	ENST00000477520	NAPB	Q9H115	298 aa		4.79	□□□□□ -1.64
PTCD3-212	ENST00000477520	SLA2	Q9H6Q3	261 aa		4.79	□□□□□ -1.64
PTCD3-212	ENST00000477520	PSTPIP2	Q9H939	334 aa		4.79	□□□□□ -1.64
PTCD3-212	ENST00000477520	GPN2	Q9H9Y4	310 aa	Predicted RBP	4.79	□□□□□ -1.64
PTCD3-212	ENST00000477520	TCF7L2	Q9NQB0	619 aa		4.79	□□□□□ -1.64
PTCD3-212	ENST00000477520	CCDC177	Q9NQR7	707 aa	Predicted RBP	4.79	□□□□□ -1.64
PTCD3-212	ENST00000477520	MAN1C1	Q9NR34	630 aa		4.79	□□□□□ -1.64
PTCD3-212	ENST00000477520	SYBU	Q9NX95	663 aa		4.79	□□□□□ -1.64
PTCD3-212	ENST00000477520	MKS1	Q9NXB0	559 aa		4.79	□□□□□ -1.64
PTCD3-212	ENST00000477520	UBA2	Q9UBT2	640 aa	Predicted RBP	4.79	□□□□□ -1.64
PTCD3-212	ENST00000477520	ASIC3	Q9UHC3	531 aa		4.79	□□□□□ -1.64
PTCD3-212	ENST00000477520	NUP50	Q9UKX7	468 aa		4.79	□□□□□ -1.64
PTCD3-212	ENST00000477520	AKAP8L	Q9ULX6	646 aa	Known RBP eCLIP	4.79	□□□□□ -1.64
PTCD3-212	ENST00000477520	PCDHA12	Q9UN75	941 aa		4.79	□□□□□ -1.64
PTCD3-212	ENST00000477520	RWDD3	Q9Y3V2	267 aa		4.79	□□□□□ -1.64
PTCD3-212	ENST00000477520	UGT2A1	Q9Y4X1	527 aa		4.79	□□□□□ -1.64
PTCD3-212	ENST00000477520	AKAP11	Q9UKA4	1901 aa		4.79	□□□□□ -1.64
PTCD3-212	ENST00000477520	ECM29	Q5VYK3	1845 aa		4.79	□□□□□ -1.64
PTCD3-212	ENST00000477520		A0A0G2JND7	137 aa		4.78	□□□□□ -1.64
PTCD3-212	ENST00000477520	CCDC194	A0A1B0GVG4	234 aa		4.78	□□□□□ -1.64
PTCD3-212	ENST00000477520	ARHGAP42	A6NI28	874 aa		4.78	□□□□□ -1.64
PTCD3-212	ENST00000477520	SAGE2P	A6NJ88	616 aa		4.78	□□□□□ -1.64
PTCD3-212	ENST00000477520	SAC3D1	A6NKF1	404 aa		4.78	□□□□□ -1.64
PTCD3-212	ENST00000477520	YDJC	A8MPS7	323 aa		4.78	□□□□□ -1.64
PTCD3-212	ENST00000477520	AP3B1	O00203	1094 aa		4.78	□□□□□ -1.64
PTCD3-212	ENST00000477520	PSMD12	O00232	456 aa	Predicted RBP	4.78	□□□□□ -1.64
PTCD3-212	ENST00000477520	TRAF5	O00463	557 aa		4.78	□□□□□ -1.64
PTCD3-212	ENST00000477520	POLR1C	O15160	346 aa	Predicted RBP	4.78	□□□□□ -1.64
PTCD3-212	ENST00000477520	CLOCK	O15516	846 aa		4.78	□□□□□ -1.64
PTCD3-212	ENST00000477520	MTSS1	O43312	755 aa		4.78	□□□□□ -1.64
PTCD3-212	ENST00000477520	SULT1B1	O43704	296 aa		4.78	□□□□□ -1.64
PTCD3-212	ENST00000477520	UGT1A9	O60656	530 aa		4.78	□□□□□ -1.64
PTCD3-212	ENST00000477520	CLPX	O76031	633 aa		4.78	□□□□□ -1.64
PTCD3-212	ENST00000477520	STAMBP	O95630	424 aa		4.78	□□□□□ -1.64
PTCD3-212	ENST00000477520	BCL10	O95999	233 aa		4.78	□□□□□ -1.64
PTCD3-212	ENST00000477520	KRT8	P05787	483 aa		4.78	□□□□□ -1.64
PTCD3-212	ENST00000477520	GZMA	P12544	262 aa		4.78	□□□□□ -1.64
PTCD3-212	ENST00000477520	EEF2	P13639	858 aa	Known RBP	4.78	□□□□□ -1.64
PTCD3-212	ENST00000477520	ATP6V1B1	P15313	513 aa		4.78	□□□□□ -1.64
PTCD3-212	ENST00000477520	UGT1A6	P19224	532 aa		4.78	□□□□□ -1.64
PTCD3-212	ENST00000477520	ITIH1	P19827	911 aa		4.78	□□□□□ -1.64
PTCD3-212	ENST00000477520	CCNA2	P20248	432 aa		4.78	□□□□□ -1.64
PTCD3-212	ENST00000477520	IMPDH1	P20839	514 aa		4.78	□□□□□ -1.64
PTCD3-212	ENST00000477520	TNFAIP3	P21580	790 aa		4.78	□□□□□ -1.64
PTCD3-212	ENST00000477520	UGT1A1	P22309	533 aa		4.78	□□□□□ -1.64
PTCD3-212	ENST00000477520	UGT1A4	P22310	534 aa		4.78	□□□□□ -1.64
PTCD3-212	ENST00000477520	PROZ	P22891	400 aa		4.78	□□□□□ -1.64
PTCD3-212	ENST00000477520	TBXAS1	P24557	533 aa	Predicted RBP	4.78	□□□□□ -1.64
PTCD3-212	ENST00000477520	SERPINB1	P30740	379 aa		4.78	□□□□□ -1.64
PTCD3-212	ENST00000477520	MCM7	P33993	719 aa		4.78	□□□□□ -1.64
PTCD3-212	ENST00000477520	UGT1A3	P35503	534 aa		4.78	□□□□□ -1.64
PTCD3-212	ENST00000477520	UGT1A5	P35504	534 aa		4.78	□□□□□ -1.64
PTCD3-212	ENST00000477520	MAGEA4	P43358	317 aa		4.78	□□□□□ -1.64
PTCD3-212	ENST00000477520	SERPINB10	P48595	397 aa		4.78	□□□□□ -1.64
PTCD3-212	ENST00000477520	BMX	P51813	675 aa		4.78	□□□□□ -1.64
PTCD3-212	ENST00000477520	AP2S1	P53680	142 aa	Predicted RBP	4.78	□□□□□ -1.64
PTCD3-212	ENST00000477520	SLC5A3	P53794	718 aa		4.78	□□□□□ -1.64
PTCD3-212	ENST00000477520	JAM2	P57087	298 aa		4.78	□□□□□ -1.64
PTCD3-212	ENST00000477520	NLRP11	P59045	1033 aa	Known RBP	4.78	□□□□□ -1.64
PTCD3-212	ENST00000477520	B2M	P61769	119 aa		4.78	□□□□□ -1.64
PTCD3-212	ENST00000477520	GPC5	P78333	572 aa		4.78	□□□□□ -1.64
PTCD3-212	ENST00000477520	S100A12	P80511	92 aa		4.78	□□□□□ -1.64
PTCD3-212	ENST00000477520	PDE1C	Q14123	709 aa	Predicted RBP	4.78	□□□□□ -1.64
PTCD3-212	ENST00000477520	PSMD6	Q15008	389 aa		4.78	□□□□□ -1.64
PTCD3-212	ENST00000477520	MORF4L2	Q15014	288 aa		4.78	□□□□□ -1.64
PTCD3-212	ENST00000477520	HERC3	Q15034	1050 aa		4.78	□□□□□ -1.64
PTCD3-212	ENST00000477520	TMED2	Q15363	201 aa		4.78	□□□□□ -1.64
PTCD3-212	ENST00000477520	CCNG2	Q16589	344 aa		4.78	□□□□□ -1.64
PTCD3-212	ENST00000477520	NFIL3	Q16649	462 aa		4.78	□□□□□ -1.64
PTCD3-212	ENST00000477520	PFKFB3	Q16875	520 aa	Predicted RBP	4.78	□□□□□ -1.64
PTCD3-212	ENST00000477520	EXOC3L4	Q17RC7	722 aa		4.78	□□□□□ -1.64
PTCD3-212	ENST00000477520	EARS2	Q5JPH6	523 aa	Known RBP	4.78	□□□□□ -1.64
PTCD3-212	ENST00000477520	CEP78	Q5JTW2	689 aa		4.78	□□□□□ -1.64
PTCD3-212	ENST00000477520	DACT2	Q5SW24	774 aa		4.78	□□□□□ -1.64
PTCD3-212	ENST00000477520	STXBP5	Q5T5C0	1151 aa		4.78	□□□□□ -1.64
PTCD3-212	ENST00000477520	ZNF618	Q5T7W0	954 aa		4.78	□□□□□ -1.64
PTCD3-212	ENST00000477520	DRICH1	Q6PGQ1	229 aa	Predicted RBP	4.78	□□□□□ -1.64
PTCD3-212	ENST00000477520	XKRX	Q6PP77	449 aa		4.78	□□□□□ -1.64
PTCD3-212	ENST00000477520	C16orf89	Q6UX73	402 aa		4.78	□□□□□ -1.64
PTCD3-212	ENST00000477520	AKAP14	Q86UN6	197 aa		4.78	□□□□□ -1.64

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