RNA–Protein interactions for RNA: ENST00000477132.1

PRKD3-209, Transcript of protein kinase D3, humanhuman

TSL 4

Gene PRKD3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-209ENST00000477132 CLDN2P57739 230 aa12.41□□□□□ -0.42
PRKD3-209ENST00000477132 NXPH1P58417 271 aa12.41□□□□□ -0.42
PRKD3-209ENST00000477132 LBRQ14739 615 aaKnown RBP12.41□□□□□ -0.42
PRKD3-209ENST00000477132 PAFAH1B3Q15102 231 aaKnown RBP12.41□□□□□ -0.42
PRKD3-209ENST00000477132 TCEAL1Q15170 157 aa12.41□□□□□ -0.42
PRKD3-209ENST00000477132 ANKRD20A8PQ5CZ79 823 aa12.41□□□□□ -0.42
PRKD3-209ENST00000477132 TMCO4Q5TGY1 634 aa12.41□□□□□ -0.42
PRKD3-209ENST00000477132 IL27RAQ6UWB1 636 aa12.41□□□□□ -0.42
PRKD3-209ENST00000477132 RAD9BQ6WBX8 426 aa12.41□□□□□ -0.42
PRKD3-209ENST00000477132 GCNT7Q6ZNI0 430 aa12.41□□□□□ -0.42
PRKD3-209ENST00000477132 CAMK1DQ8IU85 385 aa12.41□□□□□ -0.42
PRKD3-209ENST00000477132 NAXDQ8IW45 347 aa12.41□□□□□ -0.42
PRKD3-209ENST00000477132 KCTD6Q8NC69 237 aa12.41□□□□□ -0.42
PRKD3-209ENST00000477132 LRRN4Q8WUT4 740 aa12.41□□□□□ -0.42
PRKD3-209ENST00000477132 PANX2Q96RD6 677 aa12.41□□□□□ -0.42
PRKD3-209ENST00000477132 TMEM121BQ9BXQ6 578 aaPredicted RBP12.41□□□□□ -0.42
PRKD3-209ENST00000477132 CPEB1Q9BZB8 566 aaKnown RBP12.41□□□□□ -0.42
PRKD3-209ENST00000477132 BTBD3Q9Y2F9 522 aa12.41□□□□□ -0.42
PRKD3-209ENST00000477132 REXO2Q9Y3B8 237 aaKnown RBP12.41□□□□□ -0.42
PRKD3-209ENST00000477132 TDRD6O60522 2096 aaKnown RBP12.41□□□□□ -0.42
PRKD3-209ENST00000477132 CABIN1Q9Y6J0 2220 aa12.4□□□□□ -0.42
PRKD3-209ENST00000477132 A0A1B0GTQ1 180 aa12.4□□□□□ -0.42
PRKD3-209ENST00000477132 SPAARA0A1B0GVQ0 90 aa12.4□□□□□ -0.42
PRKD3-209ENST00000477132 RCCD1A6NED2 376 aa12.4□□□□□ -0.42
PRKD3-209ENST00000477132 C3orf70A6NLC5 250 aaPredicted RBP12.4□□□□□ -0.42
PRKD3-209ENST00000477132 PRAMEF26H0Y7S4 382 aa12.4□□□□□ -0.42
PRKD3-209ENST00000477132 TLR4O00206 839 aa12.4□□□□□ -0.42
PRKD3-209ENST00000477132 CBFA2T3O75081 653 aa12.4□□□□□ -0.42
PRKD3-209ENST00000477132 PRKCGP05129 697 aa12.4□□□□□ -0.42
PRKD3-209ENST00000477132 KRT7P08729 469 aa12.4□□□□□ -0.42
PRKD3-209ENST00000477132 CEACAM1P13688 526 aa12.4□□□□□ -0.42
PRKD3-209ENST00000477132 CR2P20023 1033 aa12.4□□□□□ -0.42
PRKD3-209ENST00000477132 HNRNPA2B1P22626 353 aaKnown RBP12.4□□□□□ -0.42
PRKD3-209ENST00000477132 KDELR1P24390 212 aa12.4□□□□□ -0.42
PRKD3-209ENST00000477132 SERPINB6P35237 376 aa12.4□□□□□ -0.42
PRKD3-209ENST00000477132 NUDT1P36639 197 aa12.4□□□□□ -0.42
PRKD3-209ENST00000477132 ARHGAP25P42331 645 aa12.4□□□□□ -0.42
PRKD3-209ENST00000477132 CSNK1DP48730 415 aa12.4□□□□□ -0.42
PRKD3-209ENST00000477132 C21orf59P57076 290 aa12.4□□□□□ -0.42
PRKD3-209ENST00000477132 FOXK2Q01167 660 aa12.4□□□□□ -0.42
PRKD3-209ENST00000477132 GBE1Q04446 702 aa12.4□□□□□ -0.42
PRKD3-209ENST00000477132 RAD51Q06609 339 aa12.4□□□□□ -0.42
PRKD3-209ENST00000477132 CCDC15Q0P6D6 951 aa12.4□□□□□ -0.42
PRKD3-209ENST00000477132 GALNT2Q10471 571 aa12.4□□□□□ -0.42
PRKD3-209ENST00000477132 SLC10A2Q12908 348 aaPredicted RBP12.4□□□□□ -0.42
PRKD3-209ENST00000477132 SLC14A1Q13336 389 aa12.4□□□□□ -0.42
PRKD3-209ENST00000477132 RFTN1Q14699 578 aaPredicted RBP12.4□□□□□ -0.42
PRKD3-209ENST00000477132 PDK2Q15119 407 aa12.4□□□□□ -0.42
PRKD3-209ENST00000477132 KIAA1161Q6NSJ0 714 aa12.4□□□□□ -0.42
PRKD3-209ENST00000477132 DBX2Q6ZNG2 339 aa12.4□□□□□ -0.42
PRKD3-209ENST00000477132 SRLQ86TD4 932 aa12.4□□□□□ -0.42
PRKD3-209ENST00000477132 TMEM139Q8IV31 216 aa12.4□□□□□ -0.42
PRKD3-209ENST00000477132 ATPAF2Q8N5M1 289 aa12.4□□□□□ -0.42
PRKD3-209ENST00000477132 MFSD2AQ8NA29 543 aa12.4□□□□□ -0.42
PRKD3-209ENST00000477132 RAB7BQ96AH8 199 aa12.4□□□□□ -0.42
PRKD3-209ENST00000477132 PSKH2Q96QS6 385 aa12.4□□□□□ -0.42
PRKD3-209ENST00000477132 SUV39H2Q9H5I1 410 aa12.4□□□□□ -0.42
PRKD3-209ENST00000477132 DKK3Q9UBP4 350 aa12.4□□□□□ -0.42
PRKD3-209ENST00000477132 LCMT1Q9UIC8 334 aa12.4□□□□□ -0.42
PRKD3-209ENST00000477132 SALL4Q9UJQ4 1053 aa12.4□□□□□ -0.42
PRKD3-209ENST00000477132 PCDHA13Q9Y5I0 950 aa12.4□□□□□ -0.42
PRKD3-209ENST00000477132 LRRD1A4D1F6 860 aa12.39□□□□□ -0.43
PRKD3-209ENST00000477132 IGLON5A6NGN9 336 aa12.39□□□□□ -0.43
PRKD3-209ENST00000477132 SNPHO15079 494 aa12.39□□□□□ -0.43
PRKD3-209ENST00000477132 TSPAN6O43657 245 aa12.39□□□□□ -0.43
PRKD3-209ENST00000477132 PAK4O96013 591 aaPredicted RBP12.39□□□□□ -0.43
PRKD3-209ENST00000477132 COMTP21964 271 aa12.39□□□□□ -0.43
PRKD3-209ENST00000477132 GARSP41250 739 aaKnown RBP12.39□□□□□ -0.43
PRKD3-209ENST00000477132 CCT8P50990 548 aa12.39□□□□□ -0.43
PRKD3-209ENST00000477132 HADHBP55084 474 aaKnown RBP12.39□□□□□ -0.43
PRKD3-209ENST00000477132 MAXP61244 160 aa12.39□□□□□ -0.43
PRKD3-209ENST00000477132 RPS21P63220 83 aaKnown RBP12.39□□□□□ -0.43
PRKD3-209ENST00000477132 SEMG2Q02383 582 aa12.39□□□□□ -0.43
PRKD3-209ENST00000477132 STAT4Q14765 748 aa12.39□□□□□ -0.43
PRKD3-209ENST00000477132 TTC7BQ86TV6 843 aa12.39□□□□□ -0.43
PRKD3-209ENST00000477132 GATAD2AQ86YP4 633 aa12.39□□□□□ -0.43
PRKD3-209ENST00000477132 CCDC170Q8IYT3 715 aa12.39□□□□□ -0.43
PRKD3-209ENST00000477132 SLC22A18ASQ8N1D0 253 aa12.39□□□□□ -0.43
PRKD3-209ENST00000477132 OR13H1Q8NG92 308 aa12.39□□□□□ -0.43
PRKD3-209ENST00000477132 BAHD1Q8TBE0 780 aaPredicted RBP12.39□□□□□ -0.43
PRKD3-209ENST00000477132 MARVELD3Q96A59 401 aa12.39□□□□□ -0.43
PRKD3-209ENST00000477132 ECHDC3Q96DC8 303 aa12.39□□□□□ -0.43
PRKD3-209ENST00000477132 BMFQ96LC9 184 aa12.39□□□□□ -0.43
PRKD3-209ENST00000477132 ZNF599Q96NL3 588 aa12.39□□□□□ -0.43
PRKD3-209ENST00000477132 TUBGCP5Q96RT8 1024 aa12.39□□□□□ -0.43
PRKD3-209ENST00000477132 ELF4Q99607 663 aaPredicted RBP12.39□□□□□ -0.43
PRKD3-209ENST00000477132 KLF6Q99612 283 aaPredicted RBP12.39□□□□□ -0.43
PRKD3-209ENST00000477132 MGME1Q9BQP7 344 aa12.39□□□□□ -0.43
PRKD3-209ENST00000477132 WRAP53Q9BUR4 548 aaKnown RBP12.39□□□□□ -0.43
PRKD3-209ENST00000477132 C1QTNF2Q9BXJ5 285 aa12.39□□□□□ -0.43
PRKD3-209ENST00000477132 SLC17A9Q9BYT1 436 aa12.39□□□□□ -0.43
PRKD3-209ENST00000477132 SEPT3Q9UH03 358 aa12.39□□□□□ -0.43
PRKD3-209ENST00000477132 PCOLCE2Q9UKZ9 415 aa12.39□□□□□ -0.43
PRKD3-209ENST00000477132 PCDHGB2Q9Y5G2 931 aa12.39□□□□□ -0.43
PRKD3-209ENST00000477132 SPEGQ15772 3267 aa12.39□□□□□ -0.43
PRKD3-209ENST00000477132 COL5A1P20908 1838 aaPredicted RBP12.39□□□□□ -0.43
PRKD3-209ENST00000477132 LRP4O75096 1905 aa12.39□□□□□ -0.43
PRKD3-209ENST00000477132 POM121BA6NF01 834 aa12.38□□□□□ -0.43
PRKD3-209ENST00000477132 TRAFD1O14545 582 aaPredicted RBP12.38□□□□□ -0.43
PRKD3-209ENST00000477132 MMP20O60882 483 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms