RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 RNF135Q8IUD6 432 aa13.87□□□□□ -0.19
TRAF4-210ENST00000475329 CNPY4Q8N129 248 aa13.87□□□□□ -0.19
TRAF4-210ENST00000475329 ATP2A3Q93084 1043 aa13.87□□□□□ -0.19
TRAF4-210ENST00000475329 E2F7Q96AV8 911 aa13.87□□□□□ -0.19
TRAF4-210ENST00000475329 RIPOR3Q96MK2 946 aa13.87□□□□□ -0.19
TRAF4-210ENST00000475329 TRIB3Q96RU7 358 aa13.87□□□□□ -0.19
TRAF4-210ENST00000475329 SELENOSQ9BQE4 189 aa13.87□□□□□ -0.19
TRAF4-210ENST00000475329 CNOT10Q9H9A5 744 aaKnown RBP13.87□□□□□ -0.19
TRAF4-210ENST00000475329 CHRAC1Q9NRG0 131 aa13.87□□□□□ -0.19
TRAF4-210ENST00000475329 THG1LQ9NWX6 298 aaKnown RBP13.87□□□□□ -0.19
TRAF4-210ENST00000475329 CLEC1BQ9P126 229 aa13.87□□□□□ -0.19
TRAF4-210ENST00000475329 ADAM21Q9UKJ8 722 aa13.87□□□□□ -0.19
TRAF4-210ENST00000475329 ARIH1Q9Y4X5 557 aaPredicted RBP13.87□□□□□ -0.19
TRAF4-210ENST00000475329 ACTL7BQ9Y614 415 aa13.87□□□□□ -0.19
TRAF4-210ENST00000475329 TMEM265A0A087WTH1 108 aa13.86□□□□□ -0.19
TRAF4-210ENST00000475329 ZCWPW2A0A1B0GU75 182 aa13.86□□□□□ -0.19
TRAF4-210ENST00000475329 K7ERQ8 282 aa13.86□□□□□ -0.19
TRAF4-210ENST00000475329 TBX10O75333 385 aa13.86□□□□□ -0.19
TRAF4-210ENST00000475329 IGSF6O95976 241 aa13.86□□□□□ -0.19
TRAF4-210ENST00000475329 MT-CO1P00395 513 aa13.86□□□□□ -0.19
TRAF4-210ENST00000475329 ALADP13716 330 aa13.86□□□□□ -0.19
TRAF4-210ENST00000475329 PAMP19021 973 aa13.86□□□□□ -0.19
TRAF4-210ENST00000475329 FCARP24071 287 aa13.86□□□□□ -0.19
TRAF4-210ENST00000475329 MTHFRP42898 656 aa13.86□□□□□ -0.19
TRAF4-210ENST00000475329 MAPK8P45983 427 aa13.86□□□□□ -0.19
TRAF4-210ENST00000475329 CSNK1DP48730 415 aa13.86□□□□□ -0.19
TRAF4-210ENST00000475329 SERPINB9P50453 376 aa13.86□□□□□ -0.19
TRAF4-210ENST00000475329 ATP1A2P50993 1020 aa13.86□□□□□ -0.19
TRAF4-210ENST00000475329 LAMB3Q13751 1172 aa13.86□□□□□ -0.19
TRAF4-210ENST00000475329 GALNT3Q14435 633 aa13.86□□□□□ -0.19
TRAF4-210ENST00000475329 PDGFRLQ15198 375 aa13.86□□□□□ -0.19
TRAF4-210ENST00000475329 ATXN7L2Q5T6C5 722 aaPredicted RBP13.86□□□□□ -0.19
TRAF4-210ENST00000475329 LGSNQ5TDP6 509 aa13.86□□□□□ -0.19
TRAF4-210ENST00000475329 KIAA0907Q7Z7F0 614 aaPredicted RBP13.86□□□□□ -0.19
TRAF4-210ENST00000475329 EXOC3L1Q86VI1 746 aa13.86□□□□□ -0.19
TRAF4-210ENST00000475329 SRRM1Q8IYB3 904 aaKnown RBP13.86□□□□□ -0.19
TRAF4-210ENST00000475329 UNC5BQ8IZJ1 945 aa13.86□□□□□ -0.19
TRAF4-210ENST00000475329 AHI1Q8N157 1196 aa13.86□□□□□ -0.19
TRAF4-210ENST00000475329 WFIKKN2Q8TEU8 576 aa13.86□□□□□ -0.19
TRAF4-210ENST00000475329 MFSD3Q96ES6 412 aa13.86□□□□□ -0.19
TRAF4-210ENST00000475329 ASIC4Q96FT7 647 aa13.86□□□□□ -0.19
TRAF4-210ENST00000475329 TDRD1Q9BXT4 1180 aaKnown RBP13.86□□□□□ -0.19
TRAF4-210ENST00000475329 ZFP14Q9HCL3 533 aa13.86□□□□□ -0.19
TRAF4-210ENST00000475329 ZFATQ9P243 1243 aa13.86□□□□□ -0.19
TRAF4-210ENST00000475329 HS3ST2Q9Y278 367 aa13.86□□□□□ -0.19
TRAF4-210ENST00000475329 RAI2Q9Y5P3 530 aa13.86□□□□□ -0.19
TRAF4-210ENST00000475329 PRRC2BQ5JSZ5 2229 aaKnown RBP13.86□□□□□ -0.19
TRAF4-210ENST00000475329 SCN8AQ9UQD0 1980 aa13.85□□□□□ -0.19
TRAF4-210ENST00000475329 ZNF106Q9H2Y7 1883 aaKnown RBP13.85□□□□□ -0.19
TRAF4-210ENST00000475329 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.85□□□□□ -0.19
TRAF4-210ENST00000475329 SMAD6O43541 496 aaKnown RBP13.85□□□□□ -0.19
TRAF4-210ENST00000475329 KRT37O76014 449 aa13.85□□□□□ -0.19
TRAF4-210ENST00000475329 KRT38O76015 456 aa13.85□□□□□ -0.19
TRAF4-210ENST00000475329 ERVK-10P10266 1014 aa13.85□□□□□ -0.19
TRAF4-210ENST00000475329 SRCP12931 536 aa13.85□□□□□ -0.19
TRAF4-210ENST00000475329 ARSAP15289 507 aa13.85□□□□□ -0.19
TRAF4-210ENST00000475329 POLR2EP19388 210 aaKnown RBP13.85□□□□□ -0.19
TRAF4-210ENST00000475329 CNTFP26441 200 aa13.85□□□□□ -0.19
TRAF4-210ENST00000475329 CTSOP43234 321 aaPredicted RBP13.85□□□□□ -0.19
TRAF4-210ENST00000475329 TSTD2Q5T7W7 516 aa13.85□□□□□ -0.19
TRAF4-210ENST00000475329 PDPK2PQ6A1A2 396 aa13.85□□□□□ -0.19
TRAF4-210ENST00000475329 TRIM68Q6AZZ1 485 aa13.85□□□□□ -0.19
TRAF4-210ENST00000475329 KIAA0930Q6ICG6 404 aaPredicted RBP13.85□□□□□ -0.19
TRAF4-210ENST00000475329 C22orf39Q6P5X5 142 aa13.85□□□□□ -0.19
TRAF4-210ENST00000475329 NLRP9Q7RTR0 991 aa13.85□□□□□ -0.19
TRAF4-210ENST00000475329 KCNMB4Q86W47 210 aa13.85□□□□□ -0.19
TRAF4-210ENST00000475329 NAT16Q8N8M0 369 aa13.85□□□□□ -0.19
TRAF4-210ENST00000475329 ISG20Q96AZ6 181 aaKnown RBP13.85□□□□□ -0.19
TRAF4-210ENST00000475329 MTBPQ96DY7 904 aa13.85□□□□□ -0.19
TRAF4-210ENST00000475329 ADGRE3Q9BY15 652 aa13.85□□□□□ -0.19
TRAF4-210ENST00000475329 TM6SF2Q9BZW4 377 aa13.85□□□□□ -0.19
TRAF4-210ENST00000475329 CEP44Q9C0F1 390 aa13.85□□□□□ -0.19
TRAF4-210ENST00000475329 S1PR5Q9H228 398 aa13.85□□□□□ -0.19
TRAF4-210ENST00000475329 TRABDQ9H4I3 376 aa13.85□□□□□ -0.19
TRAF4-210ENST00000475329 C20orf96Q9NUD7 363 aaPredicted RBP13.85□□□□□ -0.19
TRAF4-210ENST00000475329 NSMCE4AQ9NXX6 385 aa13.85□□□□□ -0.19
TRAF4-210ENST00000475329 CLDND1Q9NY35 253 aa13.85□□□□□ -0.19
TRAF4-210ENST00000475329 CHKBQ9Y259 395 aa13.85□□□□□ -0.19
TRAF4-210ENST00000475329 MUC22E2RYF6 1773 aaPredicted RBP13.85□□□□□ -0.19
TRAF4-210ENST00000475329 CCDC78A2IDD5 438 aa13.84□□□□□ -0.19
TRAF4-210ENST00000475329 FOXO6A8MYZ6 492 aa13.84□□□□□ -0.19
TRAF4-210ENST00000475329 UGT1A9O60656 530 aa13.84□□□□□ -0.19
TRAF4-210ENST00000475329 PAPSS2O95340 614 aaPredicted RBP13.84□□□□□ -0.19
TRAF4-210ENST00000475329 GSRP00390 522 aa13.84□□□□□ -0.19
TRAF4-210ENST00000475329 SNRPAP09012 282 aaKnown RBP13.84□□□□□ -0.19
TRAF4-210ENST00000475329 BRAFP15056 766 aa13.84□□□□□ -0.19
TRAF4-210ENST00000475329 GBP2P32456 591 aaPredicted RBP13.84□□□□□ -0.19
TRAF4-210ENST00000475329 DGKGP49619 791 aa13.84□□□□□ -0.19
TRAF4-210ENST00000475329 STK19P49842 368 aaPredicted RBP13.84□□□□□ -0.19
TRAF4-210ENST00000475329 SNRPD1P62314 119 aaKnown RBP13.84□□□□□ -0.19
TRAF4-210ENST00000475329 ECT2LQ008S8 904 aa13.84□□□□□ -0.19
TRAF4-210ENST00000475329 GABPB1Q06547 395 aaPredicted RBP13.84□□□□□ -0.19
TRAF4-210ENST00000475329 TRAF2Q12933 501 aa13.84□□□□□ -0.19
TRAF4-210ENST00000475329 MSLNQ13421 630 aaPredicted RBP13.84□□□□□ -0.19
TRAF4-210ENST00000475329 CTC1Q2NKJ3 1217 aa13.84□□□□□ -0.19
TRAF4-210ENST00000475329 LRIT3Q3SXY7 679 aa13.84□□□□□ -0.19
TRAF4-210ENST00000475329 MBLAC2Q68D91 279 aa13.84□□□□□ -0.19
TRAF4-210ENST00000475329 TANGO2Q6ICL3 276 aa13.84□□□□□ -0.19
TRAF4-210ENST00000475329 VITQ6UXI7 678 aa13.84□□□□□ -0.19
TRAF4-210ENST00000475329 PACS1Q6VY07 963 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms