RNA–Protein interactions for RNA: ENST00000475213.1

SSR1-205, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3

Gene SSR1, Length 446 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-205ENST00000475213 RFX8Q6ZV50 586 aa12.41□□□□□ -0.42
SSR1-205ENST00000475213 TMPRSS7Q7RTY8 843 aa12.41□□□□□ -0.42
SSR1-205ENST00000475213 PSTKQ8IV42 348 aaKnown RBP12.41□□□□□ -0.42
SSR1-205ENST00000475213 SLC22A18ASQ8N1D0 253 aa12.41□□□□□ -0.42
SSR1-205ENST00000475213 FAM174AQ8TBP5 190 aa12.41□□□□□ -0.42
SSR1-205ENST00000475213 EXOC2Q96KP1 924 aa12.41□□□□□ -0.42
SSR1-205ENST00000475213 BMFQ96LC9 184 aa12.41□□□□□ -0.42
SSR1-205ENST00000475213 KCNK17Q96T54 332 aa12.41□□□□□ -0.42
SSR1-205ENST00000475213 CALN1Q9BXU9 219 aa12.41□□□□□ -0.42
SSR1-205ENST00000475213 SLC39A8Q9C0K1 460 aa12.41□□□□□ -0.42
SSR1-205ENST00000475213 KLHL11Q9NVR0 708 aa12.41□□□□□ -0.42
SSR1-205ENST00000475213 IFNKQ9P0W0 207 aa12.41□□□□□ -0.42
SSR1-205ENST00000475213 LHX3Q9UBR4 397 aa12.41□□□□□ -0.42
SSR1-205ENST00000475213 SHROOM3Q8TF72 1996 aa12.41□□□□□ -0.42
SSR1-205ENST00000475213 MYLKQ15746 1914 aa12.41□□□□□ -0.42
SSR1-205ENST00000475213 ANKRD11Q6UB99 2663 aaPredicted RBP12.4□□□□□ -0.42
SSR1-205ENST00000475213 POM121BA6NF01 834 aa12.4□□□□□ -0.42
SSR1-205ENST00000475213 ARHGAP42A6NI28 874 aa12.4□□□□□ -0.42
SSR1-205ENST00000475213 A6NNZ2 444 aa12.4□□□□□ -0.42
SSR1-205ENST00000475213 NEMP1O14524 444 aa12.4□□□□□ -0.42
SSR1-205ENST00000475213 AREL1O15033 823 aa12.4□□□□□ -0.42
SSR1-205ENST00000475213 SDC3O75056 442 aa12.4□□□□□ -0.42
SSR1-205ENST00000475213 GYPCP04921 128 aa12.4□□□□□ -0.42
SSR1-205ENST00000475213 ERCC2P18074 760 aa12.4□□□□□ -0.42
SSR1-205ENST00000475213 IL1R2P27930 398 aa12.4□□□□□ -0.42
SSR1-205ENST00000475213 PCK1P35558 622 aa12.4□□□□□ -0.42
SSR1-205ENST00000475213 HCAR3P49019 387 aa12.4□□□□□ -0.42
SSR1-205ENST00000475213 DNAJC3Q13217 504 aa12.4□□□□□ -0.42
SSR1-205ENST00000475213 SGCGQ13326 291 aa12.4□□□□□ -0.42
SSR1-205ENST00000475213 ACAP1Q15027 740 aa12.4□□□□□ -0.42
SSR1-205ENST00000475213 LRRC73Q5JTD7 316 aa12.4□□□□□ -0.42
SSR1-205ENST00000475213 AFMIDQ63HM1 303 aa12.4□□□□□ -0.42
SSR1-205ENST00000475213 Q6ZSR6 202 aa12.4□□□□□ -0.42
SSR1-205ENST00000475213 PTAR1Q7Z6K3 402 aaPredicted RBP12.4□□□□□ -0.42
SSR1-205ENST00000475213 TTC7BQ86TV6 843 aa12.4□□□□□ -0.42
SSR1-205ENST00000475213 VPS36Q86VN1 386 aa12.4□□□□□ -0.42
SSR1-205ENST00000475213 ZSCAN30Q86W11 494 aa12.4□□□□□ -0.42
SSR1-205ENST00000475213 ARHGAP12Q8IWW6 846 aa12.4□□□□□ -0.42
SSR1-205ENST00000475213 ZCCHC14Q8WYQ9 949 aaKnown RBP12.4□□□□□ -0.42
SSR1-205ENST00000475213 ARHGEF26Q96DR7 871 aa12.4□□□□□ -0.42
SSR1-205ENST00000475213 IQCDQ96DY2 449 aa12.4□□□□□ -0.42
SSR1-205ENST00000475213 LENG8Q96PV6 779 aaPredicted RBP12.4□□□□□ -0.42
SSR1-205ENST00000475213 KLF6Q99612 283 aaPredicted RBP12.4□□□□□ -0.42
SSR1-205ENST00000475213 NCAPGQ9BPX3 1015 aa12.4□□□□□ -0.42
SSR1-205ENST00000475213 C1QTNF2Q9BXJ5 285 aa12.4□□□□□ -0.42
SSR1-205ENST00000475213 CPEB1Q9BZB8 566 aaKnown RBP12.4□□□□□ -0.42
SSR1-205ENST00000475213 THAP2Q9H0W7 228 aa12.4□□□□□ -0.42
SSR1-205ENST00000475213 CAAP1Q9H8G2 361 aa12.4□□□□□ -0.42
SSR1-205ENST00000475213 GPR27Q9NS67 375 aa12.4□□□□□ -0.42
SSR1-205ENST00000475213 CWC15Q9P013 229 aaKnown RBP12.4□□□□□ -0.42
SSR1-205ENST00000475213 DKK3Q9UBP4 350 aa12.4□□□□□ -0.42
SSR1-205ENST00000475213 LUC7L2Q9Y383 392 aaKnown RBP12.4□□□□□ -0.42
SSR1-205ENST00000475213 ACACAQ13085 2346 aa12.39□□□□□ -0.43
SSR1-205ENST00000475213 A0A087X0T9 212 aa12.39□□□□□ -0.43
SSR1-205ENST00000475213 TK2O00142 265 aa12.39□□□□□ -0.43
SSR1-205ENST00000475213 PIGNO95427 931 aa12.39□□□□□ -0.43
SSR1-205ENST00000475213 CAPNS1P04632 268 aa12.39□□□□□ -0.43
SSR1-205ENST00000475213 FAM228BP0C875 321 aa12.39□□□□□ -0.43
SSR1-205ENST00000475213 TCF4P15884 667 aa12.39□□□□□ -0.43
SSR1-205ENST00000475213 TIMP2P16035 220 aa12.39□□□□□ -0.43
SSR1-205ENST00000475213 ITIH2P19823 946 aa12.39□□□□□ -0.43
SSR1-205ENST00000475213 DGKAP23743 735 aa12.39□□□□□ -0.43
SSR1-205ENST00000475213 ZNF135P52742 658 aaPredicted RBP12.39□□□□□ -0.43
SSR1-205ENST00000475213 DPYSQ14117 519 aa12.39□□□□□ -0.43
SSR1-205ENST00000475213 SMAD1Q15797 465 aaKnown RBP12.39□□□□□ -0.43
SSR1-205ENST00000475213 DPYSL2Q16555 572 aa12.39□□□□□ -0.43
SSR1-205ENST00000475213 SMTNL2Q2TAL5 461 aa12.39□□□□□ -0.43
SSR1-205ENST00000475213 DHRS13Q6UX07 377 aa12.39□□□□□ -0.43
SSR1-205ENST00000475213 KYAT3Q6YP21 454 aaKnown RBP12.39□□□□□ -0.43
SSR1-205ENST00000475213 ARHGAP36Q6ZRI8 547 aa12.39□□□□□ -0.43
SSR1-205ENST00000475213 MARCH9Q86YJ5 346 aa12.39□□□□□ -0.43
SSR1-205ENST00000475213 DCP2Q8IU60 420 aaKnown RBP12.39□□□□□ -0.43
SSR1-205ENST00000475213 GALNT15Q8N3T1 639 aa12.39□□□□□ -0.43
SSR1-205ENST00000475213 SLC25A45Q8N413 288 aa12.39□□□□□ -0.43
SSR1-205ENST00000475213 NPWQ8N729 165 aa12.39□□□□□ -0.43
SSR1-205ENST00000475213 ASB12Q8WXK4 309 aa12.39□□□□□ -0.43
SSR1-205ENST00000475213 TSC1Q92574 1164 aa12.39□□□□□ -0.43
SSR1-205ENST00000475213 BTBD6Q96KE9 485 aa12.39□□□□□ -0.43
SSR1-205ENST00000475213 XPO4Q9C0E2 1151 aaKnown RBP12.39□□□□□ -0.43
SSR1-205ENST00000475213 ZWILCHQ9H900 591 aa12.39□□□□□ -0.43
SSR1-205ENST00000475213 UCKL1Q9NWZ5 548 aa12.39□□□□□ -0.43
SSR1-205ENST00000475213 PCDHGA1Q9Y5H4 931 aa12.39□□□□□ -0.43
SSR1-205ENST00000475213 CHD6Q8TD26 2715 aa12.39□□□□□ -0.43
SSR1-205ENST00000475213 ZFHX4Q86UP3 3567 aa12.38□□□□□ -0.43
SSR1-205ENST00000475213 DSPP15924 2871 aaKnown RBP12.38□□□□□ -0.43
SSR1-205ENST00000475213 DFFAO00273 331 aa12.38□□□□□ -0.43
SSR1-205ENST00000475213 FPGTO14772 594 aa12.38□□□□□ -0.43
SSR1-205ENST00000475213 BUB1BO60566 1050 aaPredicted RBP12.38□□□□□ -0.43
SSR1-205ENST00000475213 MMP20O60882 483 aa12.38□□□□□ -0.43
SSR1-205ENST00000475213 RFPL3O75679 317 aa12.38□□□□□ -0.43
SSR1-205ENST00000475213 PALMO75781 387 aa12.38□□□□□ -0.43
SSR1-205ENST00000475213 PIAS2O75928 621 aa12.38□□□□□ -0.43
SSR1-205ENST00000475213 CYP1A2P05177 515 aa12.38□□□□□ -0.43
SSR1-205ENST00000475213 CASP14P31944 242 aa12.38□□□□□ -0.43
SSR1-205ENST00000475213 RABIFP47224 123 aa12.38□□□□□ -0.43
SSR1-205ENST00000475213 RGRP47804 291 aa12.38□□□□□ -0.43
SSR1-205ENST00000475213 ACADVLP49748 655 aa12.38□□□□□ -0.43
SSR1-205ENST00000475213 FZD2Q14332 565 aa12.38□□□□□ -0.43
SSR1-205ENST00000475213 PIGHQ14442 188 aaPredicted RBP12.38□□□□□ -0.43
SSR1-205ENST00000475213 GRM3Q14832 879 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms