RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 TIGD7Q6NT04 549 aaPredicted RBP14.38□□□□□ -0.11
VAMP4-203ENST00000474047 PSAPL1Q6NUJ1 521 aa14.38□□□□□ -0.11
VAMP4-203ENST00000474047 ZSCAN30Q86W11 494 aa14.38□□□□□ -0.11
VAMP4-203ENST00000474047 CAMK1DQ8IU85 385 aa14.38□□□□□ -0.11
VAMP4-203ENST00000474047 MFSD2AQ8NA29 543 aa14.38□□□□□ -0.11
VAMP4-203ENST00000474047 CCNYQ8ND76 341 aa14.38□□□□□ -0.11
VAMP4-203ENST00000474047 HCAR2Q8TDS4 363 aa14.38□□□□□ -0.11
VAMP4-203ENST00000474047 RNF25Q96BH1 459 aaPredicted RBP14.38□□□□□ -0.11
VAMP4-203ENST00000474047 RNF157Q96PX1 679 aa14.38□□□□□ -0.11
VAMP4-203ENST00000474047 PSKH2Q96QS6 385 aa14.38□□□□□ -0.11
VAMP4-203ENST00000474047 SLC17A9Q9BYT1 436 aa14.38□□□□□ -0.11
VAMP4-203ENST00000474047 IL21RQ9HBE5 538 aa14.38□□□□□ -0.11
VAMP4-203ENST00000474047 SCUBE2Q9NQ36 999 aa14.38□□□□□ -0.11
VAMP4-203ENST00000474047 GDF3Q9NR23 364 aa14.38□□□□□ -0.11
VAMP4-203ENST00000474047 TM7SF3Q9NS93 570 aa14.38□□□□□ -0.11
VAMP4-203ENST00000474047 TFR2Q9UP52 801 aa14.38□□□□□ -0.11
VAMP4-203ENST00000474047 PCDHB9Q9Y5E1 797 aa14.38□□□□□ -0.11
VAMP4-203ENST00000474047 DMXL1Q9Y485 3027 aa14.37□□□□□ -0.11
VAMP4-203ENST00000474047 A0A0A6YYK5 440 aaPredicted RBP14.37□□□□□ -0.11
VAMP4-203ENST00000474047 WNT9AO14904 365 aa14.37□□□□□ -0.11
VAMP4-203ENST00000474047 BUB1BO60566 1050 aaPredicted RBP14.37□□□□□ -0.11
VAMP4-203ENST00000474047 KCNK5O95279 499 aa14.37□□□□□ -0.11
VAMP4-203ENST00000474047 MAP3K6O95382 1288 aa14.37□□□□□ -0.11
VAMP4-203ENST00000474047 MX2P20592 715 aa14.37□□□□□ -0.11
VAMP4-203ENST00000474047 HNRNPA2B1P22626 353 aaKnown RBP14.37□□□□□ -0.11
VAMP4-203ENST00000474047 GARSP41250 739 aaKnown RBP14.37□□□□□ -0.11
VAMP4-203ENST00000474047 MMP13P45452 471 aa14.37□□□□□ -0.11
VAMP4-203ENST00000474047 SUOXP51687 545 aa14.37□□□□□ -0.11
VAMP4-203ENST00000474047 HADHBP55084 474 aaKnown RBP14.37□□□□□ -0.11
VAMP4-203ENST00000474047 AP1S1P61966 158 aa14.37□□□□□ -0.11
VAMP4-203ENST00000474047 FOXK2Q01167 660 aa14.37□□□□□ -0.11
VAMP4-203ENST00000474047 ELP6Q0PNE2 266 aa14.37□□□□□ -0.11
VAMP4-203ENST00000474047 IFI16Q16666 785 aaKnown RBP14.37□□□□□ -0.11
VAMP4-203ENST00000474047 LRRC73Q5JTD7 316 aa14.37□□□□□ -0.11
VAMP4-203ENST00000474047 ERAP2Q6P179 960 aa14.37□□□□□ -0.11
VAMP4-203ENST00000474047 BRAT1Q6PJG6 821 aa14.37□□□□□ -0.11
VAMP4-203ENST00000474047 DAAM2Q86T65 1068 aa14.37□□□□□ -0.11
VAMP4-203ENST00000474047 RFX6Q8HWS3 928 aa14.37□□□□□ -0.11
VAMP4-203ENST00000474047 TXLNBQ8N3L3 684 aa14.37□□□□□ -0.11
VAMP4-203ENST00000474047 DEFB124Q8NES8 71 aa14.37□□□□□ -0.11
VAMP4-203ENST00000474047 CXorf40AQ8TE69 158 aa14.37□□□□□ -0.11
VAMP4-203ENST00000474047 SETD7Q8WTS6 366 aaKnown RBP14.37□□□□□ -0.11
VAMP4-203ENST00000474047 KLHDC7BQ96G42 594 aa14.37□□□□□ -0.11
VAMP4-203ENST00000474047 ZFR2Q9UPR6 939 aaKnown RBP14.37□□□□□ -0.11
VAMP4-203ENST00000474047 ITM2BQ9Y287 266 aa14.37□□□□□ -0.11
VAMP4-203ENST00000474047 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.37□□□□□ -0.11
VAMP4-203ENST00000474047 ALG6Q9Y672 507 aa14.37□□□□□ -0.11
VAMP4-203ENST00000474047 SHROOM3Q8TF72 1996 aa14.36□□□□□ -0.11
VAMP4-203ENST00000474047 TRPM6Q9BX84 2022 aa14.36□□□□□ -0.11
VAMP4-203ENST00000474047 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.36□□□□□ -0.11
VAMP4-203ENST00000474047 IGLON5A6NGN9 336 aa14.36□□□□□ -0.11
VAMP4-203ENST00000474047 APOL1O14791 398 aa14.36□□□□□ -0.11
VAMP4-203ENST00000474047 PAK4O96013 591 aaPredicted RBP14.36□□□□□ -0.11
VAMP4-203ENST00000474047 WNT1P04628 370 aa14.36□□□□□ -0.11
VAMP4-203ENST00000474047 TIMP2P16035 220 aa14.36□□□□□ -0.11
VAMP4-203ENST00000474047 ZFXP17010 805 aaPredicted RBP14.36□□□□□ -0.11
VAMP4-203ENST00000474047 CSRP1P21291 193 aaKnown RBP14.36□□□□□ -0.11
VAMP4-203ENST00000474047 FECHP22830 423 aa14.36□□□□□ -0.11
VAMP4-203ENST00000474047 CTSKP43235 329 aa14.36□□□□□ -0.11
VAMP4-203ENST00000474047 RGRP47804 291 aa14.36□□□□□ -0.11
VAMP4-203ENST00000474047 POLR2LP62875 67 aaKnown RBP14.36□□□□□ -0.11
VAMP4-203ENST00000474047 GALNT2Q10471 571 aa14.36□□□□□ -0.11
VAMP4-203ENST00000474047 OVGP1Q12889 678 aa14.36□□□□□ -0.11
VAMP4-203ENST00000474047 RAD9BQ6WBX8 426 aa14.36□□□□□ -0.11
VAMP4-203ENST00000474047 IQCHQ86VS3 1027 aa14.36□□□□□ -0.11
VAMP4-203ENST00000474047 FAF2Q96CS3 445 aa14.36□□□□□ -0.11
VAMP4-203ENST00000474047 CALR3Q96L12 384 aaKnown RBP14.36□□□□□ -0.11
VAMP4-203ENST00000474047 FZD3Q9NPG1 666 aa14.36□□□□□ -0.11
VAMP4-203ENST00000474047 CA5BQ9Y2D0 317 aa14.36□□□□□ -0.11
VAMP4-203ENST00000474047 FNDC3AQ9Y2H6 1198 aaKnown RBP14.36□□□□□ -0.11
VAMP4-203ENST00000474047 HEY1Q9Y5J3 304 aa14.36□□□□□ -0.11
VAMP4-203ENST00000474047 ASCC3Q8N3C0 2202 aaKnown RBP14.36□□□□□ -0.11
VAMP4-203ENST00000474047 DOCK9Q9BZ29 2069 aa14.36□□□□□ -0.11
VAMP4-203ENST00000474047 A0A1W2PR77 199 aa14.35□□□□□ -0.11
VAMP4-203ENST00000474047 UPK3BL1B0FP48 263 aa14.35□□□□□ -0.11
VAMP4-203ENST00000474047 C10orf142B7Z368 130 aa14.35□□□□□ -0.11
VAMP4-203ENST00000474047 UPK3BL2E5RIL1 263 aa14.35□□□□□ -0.11
VAMP4-203ENST00000474047 H0Y8X5 98 aa14.35□□□□□ -0.11
VAMP4-203ENST00000474047 PSTPIP1O43586 416 aa14.35□□□□□ -0.11
VAMP4-203ENST00000474047 ZNF883P0CG24 379 aa14.35□□□□□ -0.11
VAMP4-203ENST00000474047 CEACAM1P13688 526 aa14.35□□□□□ -0.11
VAMP4-203ENST00000474047 CCNCP24863 283 aa14.35□□□□□ -0.11
VAMP4-203ENST00000474047 ARRB1P49407 418 aaPredicted RBP14.35□□□□□ -0.11
VAMP4-203ENST00000474047 CCT8P50990 548 aa14.35□□□□□ -0.11
VAMP4-203ENST00000474047 FAM193AP78312 1265 aa14.35□□□□□ -0.11
VAMP4-203ENST00000474047 UGP2Q16851 508 aa14.35□□□□□ -0.11
VAMP4-203ENST00000474047 TMEM259Q4ZIN3 620 aa14.35□□□□□ -0.11
VAMP4-203ENST00000474047 PQLC3Q8N755 202 aa14.35□□□□□ -0.11
VAMP4-203ENST00000474047 PDCD6IPQ8WUM4 868 aaKnown RBP14.35□□□□□ -0.11
VAMP4-203ENST00000474047 WRAP53Q9BUR4 548 aaKnown RBP14.35□□□□□ -0.11
VAMP4-203ENST00000474047 C1QTNF7Q9BXJ2 289 aa14.35□□□□□ -0.11
VAMP4-203ENST00000474047 NT5MQ9NPB1 228 aa14.35□□□□□ -0.11
VAMP4-203ENST00000474047 GGT7Q9UJ14 662 aa14.35□□□□□ -0.11
VAMP4-203ENST00000474047 TTLL3Q9Y4R7 772 aa14.35□□□□□ -0.11
VAMP4-203ENST00000474047 TTC24A2A3L6 582 aaPredicted RBP14.35□□□□□ -0.11
VAMP4-203ENST00000474047 ZNF487B1APH4 448 aa14.35□□□□□ -0.11
VAMP4-203ENST00000474047 MUSKO15146 869 aa14.35□□□□□ -0.11
VAMP4-203ENST00000474047 SH3BP5O60239 455 aa14.35□□□□□ -0.11
VAMP4-203ENST00000474047 MMP20O60882 483 aa14.35□□□□□ -0.11
VAMP4-203ENST00000474047 GJB3O75712 270 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms