RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 SLC41A1Q8IVJ1 513 aa12.55□□□□□ -0.4
DDX56-209ENST00000473924 TTC13Q8NBP0 860 aa12.55□□□□□ -0.4
DDX56-209ENST00000473924 PDCD6IPQ8WUM4 868 aaKnown RBP12.55□□□□□ -0.4
DDX56-209ENST00000473924 RUBCNQ92622 972 aa12.55□□□□□ -0.4
DDX56-209ENST00000473924 PIGKQ92643 395 aa12.55□□□□□ -0.4
DDX56-209ENST00000473924 FAM131CQ96AQ9 280 aa12.55□□□□□ -0.4
DDX56-209ENST00000473924 ZNF419Q96HQ0 510 aaPredicted RBP12.55□□□□□ -0.4
DDX56-209ENST00000473924 SEMA3CQ99985 751 aa12.55□□□□□ -0.4
DDX56-209ENST00000473924 TLR10Q9BXR5 811 aa12.55□□□□□ -0.4
DDX56-209ENST00000473924 CEP41Q9BYV8 373 aa12.55□□□□□ -0.4
DDX56-209ENST00000473924 CARD9Q9H257 536 aa12.55□□□□□ -0.4
DDX56-209ENST00000473924 ARRDC1-AS1Q9H2J1 176 aa12.55□□□□□ -0.4
DDX56-209ENST00000473924 KDM4CQ9H3R0 1056 aa12.55□□□□□ -0.4
DDX56-209ENST00000473924 NOD2Q9HC29 1040 aa12.55□□□□□ -0.4
DDX56-209ENST00000473924 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.55□□□□□ -0.4
DDX56-209ENST00000473924 CEP192Q8TEP8 1941 aa12.54□□□□□ -0.4
DDX56-209ENST00000473924 SPAG17Q6Q759 2223 aa12.54□□□□□ -0.4
DDX56-209ENST00000473924 USP27XA6NNY8 438 aa12.54□□□□□ -0.4
DDX56-209ENST00000473924 ENC1O14682 589 aa12.54□□□□□ -0.4
DDX56-209ENST00000473924 GFRA3O60609 400 aa12.54□□□□□ -0.4
DDX56-209ENST00000473924 PCDH8O95206 1070 aa12.54□□□□□ -0.4
DDX56-209ENST00000473924 HLA-DQB2P05538 268 aa12.54□□□□□ -0.4
DDX56-209ENST00000473924 CR2P20023 1033 aa12.54□□□□□ -0.4
DDX56-209ENST00000473924 ITPKAP23677 461 aa12.54□□□□□ -0.4
DDX56-209ENST00000473924 MAOBP27338 520 aa12.54□□□□□ -0.4
DDX56-209ENST00000473924 MPLP40238 635 aa12.54□□□□□ -0.4
DDX56-209ENST00000473924 DPP6P42658 865 aa12.54□□□□□ -0.4
DDX56-209ENST00000473924 POLR2LP62875 67 aaKnown RBP12.54□□□□□ -0.4
DDX56-209ENST00000473924 DSC2Q02487 901 aa12.54□□□□□ -0.4
DDX56-209ENST00000473924 ZBTB17Q13105 803 aa12.54□□□□□ -0.4
DDX56-209ENST00000473924 SLC45A4Q5BKX6 768 aa12.54□□□□□ -0.4
DDX56-209ENST00000473924 DARS2Q6PI48 645 aaKnown RBP12.54□□□□□ -0.4
DDX56-209ENST00000473924 BRAT1Q6PJG6 821 aa12.54□□□□□ -0.4
DDX56-209ENST00000473924 CDKL3Q8IVW4 592 aaPredicted RBP12.54□□□□□ -0.4
DDX56-209ENST00000473924 SLC35F6Q8N357 371 aa12.54□□□□□ -0.4
DDX56-209ENST00000473924 HCAR2Q8TDS4 363 aa12.54□□□□□ -0.4
DDX56-209ENST00000473924 HTR3CQ8WXA8 447 aa12.54□□□□□ -0.4
DDX56-209ENST00000473924 RAB7BQ96AH8 199 aa12.54□□□□□ -0.4
DDX56-209ENST00000473924 BIRC7Q96CA5 298 aa12.54□□□□□ -0.4
DDX56-209ENST00000473924 AGAP3Q96P47 875 aa12.54□□□□□ -0.4
DDX56-209ENST00000473924 QKIQ96PU8 341 aaKnown RBP eCLIP12.54□□□□□ -0.4
DDX56-209ENST00000473924 IL12RB2Q99665 862 aa12.54□□□□□ -0.4
DDX56-209ENST00000473924 FAM118BQ9BPY3 351 aa12.54□□□□□ -0.4
DDX56-209ENST00000473924 MIR1-1HGQ9H1L0 117 aa12.54□□□□□ -0.4
DDX56-209ENST00000473924 PREBQ9HCU5 417 aa12.54□□□□□ -0.4
DDX56-209ENST00000473924 DKK3Q9UBP4 350 aa12.54□□□□□ -0.4
DDX56-209ENST00000473924 PCDHGC4Q9Y5F7 938 aa12.54□□□□□ -0.4
DDX56-209ENST00000473924 PCDHGA5Q9Y5G8 931 aa12.54□□□□□ -0.4
DDX56-209ENST00000473924 ATXN2Q99700 1313 aaKnown RBP12.54□□□□□ -0.4
DDX56-209ENST00000473924 BCLAF3A2AJT9 711 aaKnown RBP12.53□□□□□ -0.4
DDX56-209ENST00000473924 CEP104O60308 925 aa12.53□□□□□ -0.4
DDX56-209ENST00000473924 RNGTTO60942 597 aaKnown RBP12.53□□□□□ -0.4
DDX56-209ENST00000473924 SOCS5O75159 536 aa12.53□□□□□ -0.4
DDX56-209ENST00000473924 STK10O94804 968 aaKnown RBP12.53□□□□□ -0.4
DDX56-209ENST00000473924 SERPINF2P08697 491 aa12.53□□□□□ -0.4
DDX56-209ENST00000473924 RBP3P10745 1247 aa12.53□□□□□ -0.4
DDX56-209ENST00000473924 GNSP15586 552 aa12.53□□□□□ -0.4
DDX56-209ENST00000473924 CA4P22748 312 aa12.53□□□□□ -0.4
DDX56-209ENST00000473924 CXCR5P32302 372 aa12.53□□□□□ -0.4
DDX56-209ENST00000473924 TAS2R38P59533 333 aa12.53□□□□□ -0.4
DDX56-209ENST00000473924 CCDC6Q16204 474 aa12.53□□□□□ -0.4
DDX56-209ENST00000473924 TEX44Q53QW1 395 aa12.53□□□□□ -0.4
DDX56-209ENST00000473924 LRRC73Q5JTD7 316 aa12.53□□□□□ -0.4
DDX56-209ENST00000473924 NEK5Q6P3R8 708 aa12.53□□□□□ -0.4
DDX56-209ENST00000473924 ADAT2Q7Z6V5 191 aaKnown RBP12.53□□□□□ -0.4
DDX56-209ENST00000473924 SYT12Q8IV01 421 aa12.53□□□□□ -0.4
DDX56-209ENST00000473924 VOPP1Q96AW1 172 aa12.53□□□□□ -0.4
DDX56-209ENST00000473924 KLHL8Q9P2G9 620 aaPredicted RBP12.53□□□□□ -0.4
DDX56-209ENST00000473924 EIF2B4Q9UI10 523 aaKnown RBP12.53□□□□□ -0.4
DDX56-209ENST00000473924 TPX2Q9ULW0 747 aaKnown RBP12.53□□□□□ -0.4
DDX56-209ENST00000473924 ATP8A1Q9Y2Q0 1164 aa12.53□□□□□ -0.4
DDX56-209ENST00000473924 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.53□□□□□ -0.4
DDX56-209ENST00000473924 NUMA1Q14980 2115 aa12.53□□□□□ -0.4
DDX56-209ENST00000473924 A0A1W2PQ67 120 aa12.52□□□□□ -0.41
DDX56-209ENST00000473924 TCRBV7S2A1N4TA0A589 114 aa12.52□□□□□ -0.41
DDX56-209ENST00000473924 UPK3BL1B0FP48 263 aa12.52□□□□□ -0.41
DDX56-209ENST00000473924 UPK3BL2E5RIL1 263 aa12.52□□□□□ -0.41
DDX56-209ENST00000473924 TRAFD1O14545 582 aaPredicted RBP12.52□□□□□ -0.41
DDX56-209ENST00000473924 TSPAN6O43657 245 aa12.52□□□□□ -0.41
DDX56-209ENST00000473924 AP1G1O43747 822 aa12.52□□□□□ -0.41
DDX56-209ENST00000473924 ZNF189O75820 626 aaPredicted RBP12.52□□□□□ -0.41
DDX56-209ENST00000473924 TIMP2P16035 220 aa12.52□□□□□ -0.41
DDX56-209ENST00000473924 PTPN3P26045 913 aa12.52□□□□□ -0.41
DDX56-209ENST00000473924 RBL1P28749 1068 aa12.52□□□□□ -0.41
DDX56-209ENST00000473924 MAT2AP31153 395 aaKnown RBP12.52□□□□□ -0.41
DDX56-209ENST00000473924 ABL2P42684 1182 aa12.52□□□□□ -0.41
DDX56-209ENST00000473924 CCR5P51681 352 aa12.52□□□□□ -0.41
DDX56-209ENST00000473924 SUOXP51687 545 aa12.52□□□□□ -0.41
DDX56-209ENST00000473924 GNG11P61952 73 aa12.52□□□□□ -0.41
DDX56-209ENST00000473924 PPP2CBP62714 309 aa12.52□□□□□ -0.41
DDX56-209ENST00000473924 PPP2CAP67775 309 aa12.52□□□□□ -0.41
DDX56-209ENST00000473924 FAM193AP78312 1265 aa12.52□□□□□ -0.41
DDX56-209ENST00000473924 SPEM2Q0P670 501 aa12.52□□□□□ -0.41
DDX56-209ENST00000473924 ELP6Q0PNE2 266 aa12.52□□□□□ -0.41
DDX56-209ENST00000473924 KLF1Q13351 362 aaPredicted RBP12.52□□□□□ -0.41
DDX56-209ENST00000473924 UGP2Q16851 508 aa12.52□□□□□ -0.41
DDX56-209ENST00000473924 ARMC12Q5T9G4 340 aa12.52□□□□□ -0.41
DDX56-209ENST00000473924 ALG1LQ6GMV1 187 aa12.52□□□□□ -0.41
DDX56-209ENST00000473924 ERAP2Q6P179 960 aa12.52□□□□□ -0.41
DDX56-209ENST00000473924 PID1Q7Z2X4 250 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms