RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 IFT172Q9UG01 1749 aa1.94□□□□□ -2.1
CCDC39-203ENST00000473854 CAMSAP2Q08AD1 1489 aa1.94□□□□□ -2.1
CCDC39-203ENST00000473854 PLXNC1O60486 1568 aa1.93□□□□□ -2.1
CCDC39-203ENST00000473854 ARHGEF5Q12774 1597 aa1.93□□□□□ -2.1
CCDC39-203ENST00000473854 MAST1Q9Y2H9 1570 aa1.93□□□□□ -2.1
CCDC39-203ENST00000473854 MYOM3Q5VTT5 1437 aa1.93□□□□□ -2.1
CCDC39-203ENST00000473854 ABCC1P33527 1531 aa1.93□□□□□ -2.1
CCDC39-203ENST00000473854 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP1.93□□□□□ -2.1
CCDC39-203ENST00000473854 TSPOAP1O95153 1857 aa1.93□□□□□ -2.1
CCDC39-203ENST00000473854 DEPDC5O75140 1603 aa1.93□□□□□ -2.1
CCDC39-203ENST00000473854 A0A096LPK6 155 aa1.93□□□□□ -2.1
CCDC39-203ENST00000473854 CPED1A4D0V7 1026 aa1.93□□□□□ -2.1
CCDC39-203ENST00000473854 ASPDHA6ND91 283 aa1.93□□□□□ -2.1
CCDC39-203ENST00000473854 J3KTA2 159 aa1.93□□□□□ -2.1
CCDC39-203ENST00000473854 EGFP01133 1207 aa1.93□□□□□ -2.1
CCDC39-203ENST00000473854 IBSPP21815 317 aaPredicted RBP1.93□□□□□ -2.1
CCDC39-203ENST00000473854 CLK1P49759 484 aaKnown RBP1.93□□□□□ -2.1
CCDC39-203ENST00000473854 FAM193AP78312 1265 aa1.93□□□□□ -2.1
CCDC39-203ENST00000473854 MRPS5P82675 430 aaKnown RBP1.93□□□□□ -2.1
CCDC39-203ENST00000473854 ZNF155Q12901 538 aaPredicted RBP1.93□□□□□ -2.1
CCDC39-203ENST00000473854 DAG1Q14118 895 aa1.93□□□□□ -2.1
CCDC39-203ENST00000473854 PTPROQ16827 1216 aa1.93□□□□□ -2.1
CCDC39-203ENST00000473854 ARHGAP15Q53QZ3 475 aa1.93□□□□□ -2.1
CCDC39-203ENST00000473854 RAP1GAP2Q684P5 730 aa1.93□□□□□ -2.1
CCDC39-203ENST00000473854 PPP4R4Q6NUP7 873 aa1.93□□□□□ -2.1
CCDC39-203ENST00000473854 TRABD2AQ86V40 505 aa1.93□□□□□ -2.1
CCDC39-203ENST00000473854 WDR5BQ86VZ2 330 aa1.93□□□□□ -2.1
CCDC39-203ENST00000473854 TANKQ92844 425 aa1.93□□□□□ -2.1
CCDC39-203ENST00000473854 TMEM19Q96HH6 336 aa1.93□□□□□ -2.1
CCDC39-203ENST00000473854 LRR1Q96L50 414 aa1.93□□□□□ -2.1
CCDC39-203ENST00000473854 CDK19Q9BWU1 502 aa1.93□□□□□ -2.1
CCDC39-203ENST00000473854 NPFFR1Q9GZQ6 430 aa1.93□□□□□ -2.1
CCDC39-203ENST00000473854 EPS8L2Q9H6S3 715 aa1.93□□□□□ -2.1
CCDC39-203ENST00000473854 SLCO3A1Q9UIG8 710 aa1.93□□□□□ -2.1
CCDC39-203ENST00000473854 SLC25A13Q9UJS0 675 aa1.93□□□□□ -2.1
CCDC39-203ENST00000473854 SPHKAPQ2M3C7 1700 aa1.93□□□□□ -2.1
CCDC39-203ENST00000473854 RICTORQ6R327 1708 aa1.93□□□□□ -2.1
CCDC39-203ENST00000473854 INO80Q9ULG1 1556 aaPredicted RBP1.93□□□□□ -2.1
CCDC39-203ENST00000473854 MROH2AA6NES4 1674 aa1.93□□□□□ -2.1
CCDC39-203ENST00000473854 E9PCH4 1651 aa1.93□□□□□ -2.1
CCDC39-203ENST00000473854 KIDINS220Q9ULH0 1771 aa1.93□□□□□ -2.1
CCDC39-203ENST00000473854 TROQ12816 1431 aaPredicted RBP1.92□□□□□ -2.1
CCDC39-203ENST00000473854 AKNAQ7Z591 1439 aa1.92□□□□□ -2.1
CCDC39-203ENST00000473854 PRG4Q92954 1404 aaPredicted RBP1.92□□□□□ -2.1
CCDC39-203ENST00000473854 ZFYVE16Q7Z3T8 1539 aa1.92□□□□□ -2.1
CCDC39-203ENST00000473854 SYCP2Q9BX26 1530 aa1.92□□□□□ -2.1
CCDC39-203ENST00000473854 KDM5DQ9BY66 1539 aa1.92□□□□□ -2.1
CCDC39-203ENST00000473854 RIMBP3CA6NJZ7 1639 aa1.92□□□□□ -2.1
CCDC39-203ENST00000473854 RIMBP3BA6NNM3 1639 aa1.92□□□□□ -2.1
CCDC39-203ENST00000473854 IQGAP3Q86VI3 1631 aa1.92□□□□□ -2.1
CCDC39-203ENST00000473854 MROH1Q8NDA8 1641 aa1.92□□□□□ -2.1
CCDC39-203ENST00000473854 RNF17Q9BXT8 1623 aaKnown RBP1.92□□□□□ -2.1
CCDC39-203ENST00000473854 RIMBP3Q9UFD9 1639 aa1.92□□□□□ -2.1
CCDC39-203ENST00000473854 SIGLEC1Q9BZZ2 1709 aa1.92□□□□□ -2.1
CCDC39-203ENST00000473854 hDV102S1A0JD36 115 aa1.92□□□□□ -2.1
CCDC39-203ENST00000473854 PSMD14O00487 310 aa1.92□□□□□ -2.1
CCDC39-203ENST00000473854 TAF5LO75529 589 aa1.92□□□□□ -2.1
CCDC39-203ENST00000473854 RFPL1O75677 317 aa1.92□□□□□ -2.1
CCDC39-203ENST00000473854 HRGP04196 525 aa1.92□□□□□ -2.1
CCDC39-203ENST00000473854 PATE4P0C8F1 98 aa1.92□□□□□ -2.1
CCDC39-203ENST00000473854 PECAM1P16284 738 aaPredicted RBP1.92□□□□□ -2.1
CCDC39-203ENST00000473854 YWHAQP27348 245 aa1.92□□□□□ -2.1
CCDC39-203ENST00000473854 PEX2P28328 305 aa1.92□□□□□ -2.1
CCDC39-203ENST00000473854 OASLQ15646 514 aaKnown RBP1.92□□□□□ -2.1
CCDC39-203ENST00000473854 MAPKAPK3Q16644 382 aa1.92□□□□□ -2.1
CCDC39-203ENST00000473854 CCDC129Q6ZRS4 1044 aa1.92□□□□□ -2.1
CCDC39-203ENST00000473854 DSG4Q86SJ6 1040 aa1.92□□□□□ -2.1
CCDC39-203ENST00000473854 ERC1Q8IUD2 1116 aa1.92□□□□□ -2.1
CCDC39-203ENST00000473854 FAM177A1Q8N128 213 aaPredicted RBP1.92□□□□□ -2.1
CCDC39-203ENST00000473854 ATP11CQ8NB49 1132 aa1.92□□□□□ -2.1
CCDC39-203ENST00000473854 SLC24A4Q8NFF2 622 aa1.92□□□□□ -2.1
CCDC39-203ENST00000473854 WDR20Q8TBZ3 569 aa1.92□□□□□ -2.1
CCDC39-203ENST00000473854 STAG1Q8WVM7 1258 aa1.92□□□□□ -2.1
CCDC39-203ENST00000473854 WDR60Q8WVS4 1066 aa1.92□□□□□ -2.1
CCDC39-203ENST00000473854 C3orf30Q96M34 536 aa1.92□□□□□ -2.1
CCDC39-203ENST00000473854 TEFMQ96QE5 360 aaKnown RBP1.92□□□□□ -2.1
CCDC39-203ENST00000473854 LRRC1Q9BTT6 524 aa1.92□□□□□ -2.1
CCDC39-203ENST00000473854 MSTO1Q9BUK6 570 aa1.92□□□□□ -2.1
CCDC39-203ENST00000473854 CDH19Q9H159 772 aa1.92□□□□□ -2.1
CCDC39-203ENST00000473854 FKRPQ9H9S5 495 aa1.92□□□□□ -2.1
CCDC39-203ENST00000473854 KLHL1Q9NR64 748 aa1.92□□□□□ -2.1
CCDC39-203ENST00000473854 OR6C3Q9NZP0 311 aa1.92□□□□□ -2.1
CCDC39-203ENST00000473854 ZIM2Q9NZV7 527 aa1.92□□□□□ -2.1
CCDC39-203ENST00000473854 TRPC5Q9UL62 973 aaPredicted RBP1.92□□□□□ -2.1
CCDC39-203ENST00000473854 NOP58Q9Y2X3 529 aaKnown RBP1.92□□□□□ -2.1
CCDC39-203ENST00000473854 MORC2Q9Y6X9 1032 aaPredicted RBP1.92□□□□□ -2.1
CCDC39-203ENST00000473854 RAB3GAP2Q9H2M9 1393 aa1.92□□□□□ -2.1
CCDC39-203ENST00000473854 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP1.92□□□□□ -2.1
CCDC39-203ENST00000473854 ATP10BO94823 1461 aa1.92□□□□□ -2.1
CCDC39-203ENST00000473854 ADGRL2O95490 1459 aa1.92□□□□□ -2.1
CCDC39-203ENST00000473854 SHANK2Q9UPX8 1470 aa1.92□□□□□ -2.1
CCDC39-203ENST00000473854 ZC3H13Q5T200 1668 aaKnown RBP1.92□□□□□ -2.1
CCDC39-203ENST00000473854 HFM1A2PYH4 1435 aa1.91□□□□□ -2.1
CCDC39-203ENST00000473854 DAPK1P53355 1430 aa1.91□□□□□ -2.1
CCDC39-203ENST00000473854 NAIPQ13075 1403 aa1.91□□□□□ -2.1
CCDC39-203ENST00000473854 GPATCH8Q9UKJ3 1502 aaKnown RBP1.91□□□□□ -2.1
CCDC39-203ENST00000473854 ABCA6Q8N139 1617 aa1.91□□□□□ -2.1
CCDC39-203ENST00000473854 MAP3K4Q9Y6R4 1608 aa1.91□□□□□ -2.1
CCDC39-203ENST00000473854 BCORL1Q5H9F3 1711 aa1.91□□□□□ -2.1
CCDC39-203ENST00000473854 FRMPD1Q5SYB0 1578 aa1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms