RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 SLC35E2BP0CK96 405 aa6.17□□□□□ -1.42
HERC4-209ENST00000473533 NFKB1P19838 968 aa6.17□□□□□ -1.42
HERC4-209ENST00000473533 LRPAP1P30533 357 aa6.17□□□□□ -1.42
HERC4-209ENST00000473533 CD97P48960 835 aa6.17□□□□□ -1.42
HERC4-209ENST00000473533 CDKL1Q00532 357 aa6.17□□□□□ -1.42
HERC4-209ENST00000473533 GRIK2Q13002 908 aa6.17□□□□□ -1.42
HERC4-209ENST00000473533 SEPT6Q14141 434 aa6.17□□□□□ -1.42
HERC4-209ENST00000473533 TBCELQ5QJ74 424 aa6.17□□□□□ -1.42
HERC4-209ENST00000473533 GRAMD4Q6IC98 578 aa6.17□□□□□ -1.42
HERC4-209ENST00000473533 DCLRE1AQ6PJP8 1040 aa6.17□□□□□ -1.42
HERC4-209ENST00000473533 Q6ZNX1 250 aa6.17□□□□□ -1.42
HERC4-209ENST00000473533 NEK10Q6ZWH5 1172 aa6.17□□□□□ -1.42
HERC4-209ENST00000473533 CDR2LQ86X02 465 aaPredicted RBP6.17□□□□□ -1.42
HERC4-209ENST00000473533 CLVS1Q8IUQ0 354 aaPredicted RBP6.17□□□□□ -1.42
HERC4-209ENST00000473533 MINDY2Q8NBR6 621 aa6.17□□□□□ -1.42
HERC4-209ENST00000473533 TFAP2CQ92754 450 aa6.17□□□□□ -1.42
HERC4-209ENST00000473533 FCRL5Q96RD9 977 aa6.17□□□□□ -1.42
HERC4-209ENST00000473533 AGAP2Q99490 1192 aa6.17□□□□□ -1.42
HERC4-209ENST00000473533 NPAS2Q99743 824 aa6.17□□□□□ -1.42
HERC4-209ENST00000473533 APBA2Q99767 749 aa6.17□□□□□ -1.42
HERC4-209ENST00000473533 B3GNT5Q9BYG0 378 aa6.17□□□□□ -1.42
HERC4-209ENST00000473533 MINDY3Q9H8M7 445 aa6.17□□□□□ -1.42
HERC4-209ENST00000473533 SNTG2Q9NY99 539 aa6.17□□□□□ -1.42
HERC4-209ENST00000473533 PIM2Q9P1W9 311 aa6.17□□□□□ -1.42
HERC4-209ENST00000473533 CD300AQ9UGN4 299 aa6.17□□□□□ -1.42
HERC4-209ENST00000473533 BLOC1S6Q9UL45 172 aa6.17□□□□□ -1.42
HERC4-209ENST00000473533 BRWD3Q6RI45 1802 aa6.17□□□□□ -1.42
HERC4-209ENST00000473533 LRRC37A2A6NM11 1700 aa6.17□□□□□ -1.42
HERC4-209ENST00000473533 DHRS12A0PJE2 317 aa6.17□□□□□ -1.42
HERC4-209ENST00000473533 TARM1B6A8C7 271 aa6.17□□□□□ -1.42
HERC4-209ENST00000473533 ZBTB24O43167 697 aaPredicted RBP6.17□□□□□ -1.42
HERC4-209ENST00000473533 EIF2S1P05198 315 aaKnown RBP6.17□□□□□ -1.42
HERC4-209ENST00000473533 TPP2P29144 1249 aaPredicted RBP6.17□□□□□ -1.42
HERC4-209ENST00000473533 PFKPQ01813 784 aa6.17□□□□□ -1.42
HERC4-209ENST00000473533 ADIGQ0VDE8 80 aa6.17□□□□□ -1.42
HERC4-209ENST00000473533 NRF1Q16656 503 aa6.17□□□□□ -1.42
HERC4-209ENST00000473533 LCN8Q6JVE9 175 aa6.17□□□□□ -1.42
HERC4-209ENST00000473533 CES3Q6UWW8 571 aa6.17□□□□□ -1.42
HERC4-209ENST00000473533 LINC00299Q6ZSB3 139 aa6.17□□□□□ -1.42
HERC4-209ENST00000473533 GPR180Q86V85 440 aa6.17□□□□□ -1.42
HERC4-209ENST00000473533 PIGZQ86VD9 579 aa6.17□□□□□ -1.42
HERC4-209ENST00000473533 TBC1D21Q8IYX1 336 aa6.17□□□□□ -1.42
HERC4-209ENST00000473533 FIBCD1Q8N539 461 aa6.17□□□□□ -1.42
HERC4-209ENST00000473533 MINDY1Q8N5J2 469 aa6.17□□□□□ -1.42
HERC4-209ENST00000473533 AADATQ8N5Z0 425 aa6.17□□□□□ -1.42
HERC4-209ENST00000473533 LRTOMTQ8WZ04 291 aa6.17□□□□□ -1.42
HERC4-209ENST00000473533 MFSD3Q96ES6 412 aa6.17□□□□□ -1.42
HERC4-209ENST00000473533 CPB2Q96IY4 423 aa6.17□□□□□ -1.42
HERC4-209ENST00000473533 DNAJC1Q96KC8 554 aaKnown RBP6.17□□□□□ -1.42
HERC4-209ENST00000473533 TRIM54Q9BYV2 358 aa6.17□□□□□ -1.42
HERC4-209ENST00000473533 CATSPERBQ9H7T0 1116 aa6.17□□□□□ -1.42
HERC4-209ENST00000473533 CAB39LQ9H9S4 337 aa6.17□□□□□ -1.42
HERC4-209ENST00000473533 ACTR3BQ9P1U1 418 aa6.17□□□□□ -1.42
HERC4-209ENST00000473533 FBXW11Q9UKB1 542 aa6.17□□□□□ -1.42
HERC4-209ENST00000473533 B3GNT3Q9Y2A9 372 aa6.17□□□□□ -1.42
HERC4-209ENST00000473533 ZNF510Q9Y2H8 683 aa6.17□□□□□ -1.42
HERC4-209ENST00000473533 CITO14578 2027 aa6.17□□□□□ -1.42
HERC4-209ENST00000473533 KCNU1A8MYU2 1149 aa6.17□□□□□ -1.42
HERC4-209ENST00000473533 E7ENX8 843 aa6.17□□□□□ -1.42
HERC4-209ENST00000473533 H0YAE9 185 aa6.17□□□□□ -1.42
HERC4-209ENST00000473533 KCNK1O00180 336 aa6.17□□□□□ -1.42
HERC4-209ENST00000473533 ADCY6O43306 1168 aa6.17□□□□□ -1.42
HERC4-209ENST00000473533 NPPAP01160 153 aa6.17□□□□□ -1.42
HERC4-209ENST00000473533 CPB1P15086 417 aa6.17□□□□□ -1.42
HERC4-209ENST00000473533 GALK1P51570 392 aa6.17□□□□□ -1.42
HERC4-209ENST00000473533 TNK2Q07912 1038 aa6.17□□□□□ -1.42
HERC4-209ENST00000473533 MERTKQ12866 999 aa6.17□□□□□ -1.42
HERC4-209ENST00000473533 RPS6KA2Q15349 733 aa6.17□□□□□ -1.42
HERC4-209ENST00000473533 ZBTB6Q15916 424 aa6.17□□□□□ -1.42
HERC4-209ENST00000473533 MOGQ16653 247 aa6.17□□□□□ -1.42
HERC4-209ENST00000473533 GK5Q6ZS86 529 aa6.17□□□□□ -1.42
HERC4-209ENST00000473533 CATSPER4Q7RTX7 472 aa6.17□□□□□ -1.42
HERC4-209ENST00000473533 MIER2Q8N344 545 aa6.17□□□□□ -1.42
HERC4-209ENST00000473533 ZNF786Q8N393 782 aa6.17□□□□□ -1.42
HERC4-209ENST00000473533 DHRSXQ8N5I4 330 aa6.17□□□□□ -1.42
HERC4-209ENST00000473533 FAM47BQ8NA70 645 aa6.17□□□□□ -1.42
HERC4-209ENST00000473533 B3GALNT2Q8NCR0 500 aa6.17□□□□□ -1.42
HERC4-209ENST00000473533 C2CD4AQ8NCU7 369 aaPredicted RBP6.17□□□□□ -1.42
HERC4-209ENST00000473533 SHCBP1Q8NEM2 672 aa6.17□□□□□ -1.42
HERC4-209ENST00000473533 SPPL2BQ8TCT7 592 aa6.17□□□□□ -1.42
HERC4-209ENST00000473533 SLC2A14Q8TDB8 520 aa6.17□□□□□ -1.42
HERC4-209ENST00000473533 ISOC1Q96CN7 298 aa6.17□□□□□ -1.42
HERC4-209ENST00000473533 RDH12Q96NR8 316 aa6.17□□□□□ -1.42
HERC4-209ENST00000473533 MED10Q9BTT4 135 aa6.17□□□□□ -1.42
HERC4-209ENST00000473533 ADI1Q9BV57 179 aa6.17□□□□□ -1.42
HERC4-209ENST00000473533 OXCT2Q9BYC2 517 aaPredicted RBP6.17□□□□□ -1.42
HERC4-209ENST00000473533 OCEL1Q9H607 264 aa6.17□□□□□ -1.42
HERC4-209ENST00000473533 VTA1Q9NP79 307 aa6.17□□□□□ -1.42
HERC4-209ENST00000473533 RNF11Q9Y3C5 154 aa6.17□□□□□ -1.42
HERC4-209ENST00000473533 TCAF1Q9Y4C2 921 aa6.17□□□□□ -1.42
HERC4-209ENST00000473533 SLC30A1Q9Y6M5 507 aa6.17□□□□□ -1.42
HERC4-209ENST00000473533 GRXCR2A6NFK2 248 aa6.16□□□□□ -1.42
HERC4-209ENST00000473533 IRF6O14896 467 aa6.16□□□□□ -1.42
HERC4-209ENST00000473533 PHGDHO43175 533 aaKnown RBP6.16□□□□□ -1.42
HERC4-209ENST00000473533 CACNG3O60359 315 aa6.16□□□□□ -1.42
HERC4-209ENST00000473533 KATNA1O75449 491 aa6.16□□□□□ -1.42
HERC4-209ENST00000473533 GMNNO75496 209 aa6.16□□□□□ -1.42
HERC4-209ENST00000473533 PAPSS2O95340 614 aaPredicted RBP6.16□□□□□ -1.42
HERC4-209ENST00000473533 LGALS2P05162 132 aa6.16□□□□□ -1.42
HERC4-209ENST00000473533 PORP16435 677 aaPredicted RBP6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms