RNA–Protein interactions for RNA: ENST00000473373.1

CPNE1-222, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-222ENST00000473373 ZNF423Q2M1K9 1284 aa11.67□□□□□ -0.54
CPNE1-222ENST00000473373 ARTNQ5T4W7 220 aa11.67□□□□□ -0.54
CPNE1-222ENST00000473373 ERAP2Q6P179 960 aa11.67□□□□□ -0.54
CPNE1-222ENST00000473373 IQCHQ86VS3 1027 aa11.67□□□□□ -0.54
CPNE1-222ENST00000473373 ZSCAN30Q86W11 494 aa11.67□□□□□ -0.54
CPNE1-222ENST00000473373 MAP7D3Q8IWC1 876 aa11.67□□□□□ -0.54
CPNE1-222ENST00000473373 ARFGAP1Q8N6T3 406 aa11.67□□□□□ -0.54
CPNE1-222ENST00000473373 PNPLA1Q8N8W4 532 aa11.67□□□□□ -0.54
CPNE1-222ENST00000473373 PDCD6IPQ8WUM4 868 aaKnown RBP11.67□□□□□ -0.54
CPNE1-222ENST00000473373 TEKT4Q8WW24 435 aa11.67□□□□□ -0.54
CPNE1-222ENST00000473373 ZCCHC14Q8WYQ9 949 aaKnown RBP11.67□□□□□ -0.54
CPNE1-222ENST00000473373 GATA6Q92908 595 aa11.67□□□□□ -0.54
CPNE1-222ENST00000473373 DNAJC7Q99615 494 aa11.67□□□□□ -0.54
CPNE1-222ENST00000473373 ORAI3Q9BRQ5 295 aa11.67□□□□□ -0.54
CPNE1-222ENST00000473373 WRAP53Q9BUR4 548 aaKnown RBP11.67□□□□□ -0.54
CPNE1-222ENST00000473373 SLC17A9Q9BYT1 436 aa11.67□□□□□ -0.54
CPNE1-222ENST00000473373 LRRC19Q9H756 370 aa11.67□□□□□ -0.54
CPNE1-222ENST00000473373 ATP13A3Q9H7F0 1226 aa11.67□□□□□ -0.54
CPNE1-222ENST00000473373 NHEJ1Q9H9Q4 299 aaPredicted RBP11.67□□□□□ -0.54
CPNE1-222ENST00000473373 SPTLC3Q9NUV7 552 aa11.67□□□□□ -0.54
CPNE1-222ENST00000473373 HAUS2Q9NVX0 235 aa11.67□□□□□ -0.54
CPNE1-222ENST00000473373 PCOLCE2Q9UKZ9 415 aa11.67□□□□□ -0.54
CPNE1-222ENST00000473373 ITM2BQ9Y287 266 aa11.67□□□□□ -0.54
CPNE1-222ENST00000473373 TTLL3Q9Y4R7 772 aa11.67□□□□□ -0.54
CPNE1-222ENST00000473373 FADS3Q9Y5Q0 445 aa11.67□□□□□ -0.54
CPNE1-222ENST00000473373 AKAP13Q12802 2813 aa11.67□□□□□ -0.54
CPNE1-222ENST00000473373 SPEGQ15772 3267 aa11.66□□□□□ -0.54
CPNE1-222ENST00000473373 TMEM8BA6NDV4 472 aa11.66□□□□□ -0.54
CPNE1-222ENST00000473373 IGLON5A6NGN9 336 aa11.66□□□□□ -0.54
CPNE1-222ENST00000473373 RNF103O00237 685 aa11.66□□□□□ -0.54
CPNE1-222ENST00000473373 INSIG1O15503 277 aa11.66□□□□□ -0.54
CPNE1-222ENST00000473373 AP1G1O43747 822 aa11.66□□□□□ -0.54
CPNE1-222ENST00000473373 SDC3O75056 442 aa11.66□□□□□ -0.54
CPNE1-222ENST00000473373 TM7SF2O76062 418 aa11.66□□□□□ -0.54
CPNE1-222ENST00000473373 KRT7P08729 469 aa11.66□□□□□ -0.54
CPNE1-222ENST00000473373 TCF4P15884 667 aa11.66□□□□□ -0.54
CPNE1-222ENST00000473373 ABL2P42684 1182 aa11.66□□□□□ -0.54
CPNE1-222ENST00000473373 HCAR3P49019 387 aa11.66□□□□□ -0.54
CPNE1-222ENST00000473373 SCNN1BP51168 640 aa11.66□□□□□ -0.54
CPNE1-222ENST00000473373 THOP1P52888 689 aa11.66□□□□□ -0.54
CPNE1-222ENST00000473373 CLDN2P57739 230 aa11.66□□□□□ -0.54
CPNE1-222ENST00000473373 NXPH1P58417 271 aa11.66□□□□□ -0.54
CPNE1-222ENST00000473373 FAM193AP78312 1265 aa11.66□□□□□ -0.54
CPNE1-222ENST00000473373 IL10RBQ08334 325 aa11.66□□□□□ -0.54
CPNE1-222ENST00000473373 RFTN1Q14699 578 aaPredicted RBP11.66□□□□□ -0.54
CPNE1-222ENST00000473373 LBRQ14739 615 aaKnown RBP11.66□□□□□ -0.54
CPNE1-222ENST00000473373 CYTH1Q15438 398 aa11.66□□□□□ -0.54
CPNE1-222ENST00000473373 ZNF284Q2VY69 593 aa11.66□□□□□ -0.54
CPNE1-222ENST00000473373 TMCO4Q5TGY1 634 aa11.66□□□□□ -0.54
CPNE1-222ENST00000473373 POLNQ7Z5Q5 900 aa11.66□□□□□ -0.54
CPNE1-222ENST00000473373 SRLQ86TD4 932 aa11.66□□□□□ -0.54
CPNE1-222ENST00000473373 EID2Q8N6I1 236 aa11.66□□□□□ -0.54
CPNE1-222ENST00000473373 NIPA2Q8N8Q9 360 aa11.66□□□□□ -0.54
CPNE1-222ENST00000473373 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.66□□□□□ -0.54
CPNE1-222ENST00000473373 FAM131CQ96AQ9 280 aa11.66□□□□□ -0.54
CPNE1-222ENST00000473373 ZNF830Q96NB3 372 aaPredicted RBP11.66□□□□□ -0.54
CPNE1-222ENST00000473373 CSPG4P5Q96PW8 444 aa11.66□□□□□ -0.54
CPNE1-222ENST00000473373 PACSIN1Q9BY11 444 aa11.66□□□□□ -0.54
CPNE1-222ENST00000473373 SUV39H2Q9H5I1 410 aa11.66□□□□□ -0.54
CPNE1-222ENST00000473373 PCDH18Q9HCL0 1135 aa11.66□□□□□ -0.54
CPNE1-222ENST00000473373 LUC7LQ9NQ29 371 aaKnown RBP11.66□□□□□ -0.54
CPNE1-222ENST00000473373 SCUBE2Q9NQ36 999 aa11.66□□□□□ -0.54
CPNE1-222ENST00000473373 KLHL11Q9NVR0 708 aa11.66□□□□□ -0.54
CPNE1-222ENST00000473373 DNAJC28Q9NX36 388 aa11.66□□□□□ -0.54
CPNE1-222ENST00000473373 LHX3Q9UBR4 397 aa11.66□□□□□ -0.54
CPNE1-222ENST00000473373 SEPT3Q9UH03 358 aa11.66□□□□□ -0.54
CPNE1-222ENST00000473373 KLK13Q9UKR3 277 aa11.66□□□□□ -0.54
CPNE1-222ENST00000473373 LHX6Q9UPM6 363 aa11.66□□□□□ -0.54
CPNE1-222ENST00000473373 ZFR2Q9UPR6 939 aaKnown RBP11.66□□□□□ -0.54
CPNE1-222ENST00000473373 ATRXP46100 2492 aa11.65□□□□□ -0.54
CPNE1-222ENST00000473373 MYLKQ15746 1914 aa11.65□□□□□ -0.54
CPNE1-222ENST00000473373 A0A1W2PR77 199 aa11.65□□□□□ -0.54
CPNE1-222ENST00000473373 H3BM21 787 aa11.65□□□□□ -0.54
CPNE1-222ENST00000473373 LZTS3O60299 673 aaPredicted RBP11.65□□□□□ -0.54
CPNE1-222ENST00000473373 PCDHGA12O60330 932 aa11.65□□□□□ -0.54
CPNE1-222ENST00000473373 MMP20O60882 483 aa11.65□□□□□ -0.54
CPNE1-222ENST00000473373 PROSCO94903 275 aa11.65□□□□□ -0.54
CPNE1-222ENST00000473373 IPO7O95373 1038 aaKnown RBP11.65□□□□□ -0.54
CPNE1-222ENST00000473373 LDOC1O95751 146 aaPredicted RBP11.65□□□□□ -0.54
CPNE1-222ENST00000473373 TMEM253P0C7T8 217 aa11.65□□□□□ -0.54
CPNE1-222ENST00000473373 NFKBIAP25963 317 aa11.65□□□□□ -0.54
CPNE1-222ENST00000473373 HNRNPH3P31942 346 aaKnown RBP11.65□□□□□ -0.54
CPNE1-222ENST00000473373 NOP2P46087 812 aaKnown RBP11.65□□□□□ -0.54
CPNE1-222ENST00000473373 DPYSQ14117 519 aa11.65□□□□□ -0.54
CPNE1-222ENST00000473373 ARHGAP36Q6ZRI8 547 aa11.65□□□□□ -0.54
CPNE1-222ENST00000473373 RHOT2Q8IXI1 618 aa11.65□□□□□ -0.54
CPNE1-222ENST00000473373 CHCHD4Q8N4Q1 142 aa11.65□□□□□ -0.54
CPNE1-222ENST00000473373 NPWQ8N729 165 aa11.65□□□□□ -0.54
CPNE1-222ENST00000473373 TSEN2Q8NCE0 465 aaKnown RBP11.65□□□□□ -0.54
CPNE1-222ENST00000473373 OR13H1Q8NG92 308 aa11.65□□□□□ -0.54
CPNE1-222ENST00000473373 FAM174AQ8TBP5 190 aa11.65□□□□□ -0.54
CPNE1-222ENST00000473373 CNDP2Q96KP4 475 aaKnown RBP11.65□□□□□ -0.54
CPNE1-222ENST00000473373 TUBGCP5Q96RT8 1024 aa11.65□□□□□ -0.54
CPNE1-222ENST00000473373 CHP1Q99653 195 aa11.65□□□□□ -0.54
CPNE1-222ENST00000473373 MAK16Q9BXY0 300 aaKnown RBP11.65□□□□□ -0.54
CPNE1-222ENST00000473373 CPEB1Q9BZB8 566 aaKnown RBP11.65□□□□□ -0.54
CPNE1-222ENST00000473373 GGT7Q9UJ14 662 aa11.65□□□□□ -0.54
CPNE1-222ENST00000473373 BTBD3Q9Y2F9 522 aa11.65□□□□□ -0.54
CPNE1-222ENST00000473373 MFHAS1Q9Y4C4 1052 aa11.65□□□□□ -0.54
CPNE1-222ENST00000473373 GOLGA4Q13439 2230 aaKnown RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms