RNA–Protein interactions for RNA: ENST00000473214.1

RTF1-203, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene RTF1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-203ENST00000473214 SLC25A10Q9UBX3 287 aaPredicted RBP6.12□□□□□ -1.43
RTF1-203ENST00000473214 RAPGEFL1Q9UHV5 662 aa6.12□□□□□ -1.43
RTF1-203ENST00000473214 OSGIN1Q9UJX0 560 aa6.12□□□□□ -1.43
RTF1-203ENST00000473214 DSEQ9UL01 958 aa6.12□□□□□ -1.43
RTF1-203ENST00000473214 SNX6Q9UNH7 406 aa6.12□□□□□ -1.43
RTF1-203ENST00000473214 RUVBL1Q9Y265 456 aaKnown RBP6.12□□□□□ -1.43
RTF1-203ENST00000473214 DLGAP4Q9Y2H0 992 aa6.12□□□□□ -1.43
RTF1-203ENST00000473214 TELO2Q9Y4R8 837 aa6.12□□□□□ -1.43
RTF1-203ENST00000473214 RGPD3A6NKT7 1758 aaPredicted RBP6.11□□□□□ -1.43
RTF1-203ENST00000473214 RGPD4Q7Z3J3 1758 aa6.11□□□□□ -1.43
RTF1-203ENST00000473214 GOLGB1Q14789 3259 aaKnown RBP6.11□□□□□ -1.43
RTF1-203ENST00000473214 ATP10DQ9P241 1426 aa6.11□□□□□ -1.43
RTF1-203ENST00000473214 TRBV23OR9-2A0A075B6M9 112 aa6.11□□□□□ -1.43
RTF1-203ENST00000473214 CCDC187A0A096LP49 1063 aa6.11□□□□□ -1.43
RTF1-203ENST00000473214 LOC100653049A0A140TA62 436 aa6.11□□□□□ -1.43
RTF1-203ENST00000473214 FAM90A20PA6NIJ5 464 aa6.11□□□□□ -1.43
RTF1-203ENST00000473214 ZSCAN5BA6NJL1 495 aa6.11□□□□□ -1.43
RTF1-203ENST00000473214 GCOM1H8Y6P7 765 aaPredicted RBP6.11□□□□□ -1.43
RTF1-203ENST00000473214 PSMD9O00233 223 aa6.11□□□□□ -1.43
RTF1-203ENST00000473214 SYN3O14994 580 aa6.11□□□□□ -1.43
RTF1-203ENST00000473214 ZNF185O15231 689 aa6.11□□□□□ -1.43
RTF1-203ENST00000473214 CASC3O15234 703 aaKnown RBP6.11□□□□□ -1.43
RTF1-203ENST00000473214 NVLO15381 856 aaKnown RBP6.11□□□□□ -1.43
RTF1-203ENST00000473214 LRRN2O75325 713 aa6.11□□□□□ -1.43
RTF1-203ENST00000473214 KRT34O76011 436 aa6.11□□□□□ -1.43
RTF1-203ENST00000473214 CDKL5O76039 1030 aa6.11□□□□□ -1.43
RTF1-203ENST00000473214 OR2C1O95371 312 aa6.11□□□□□ -1.43
RTF1-203ENST00000473214 DDAH2O95865 285 aa6.11□□□□□ -1.43
RTF1-203ENST00000473214 ONECUT2O95948 504 aa6.11□□□□□ -1.43
RTF1-203ENST00000473214 PDGFBP01127 241 aaPredicted RBP6.11□□□□□ -1.43
RTF1-203ENST00000473214 IL1AP01583 271 aa6.11□□□□□ -1.43
RTF1-203ENST00000473214 FGF4P08620 206 aa6.11□□□□□ -1.43
RTF1-203ENST00000473214 WEE2P0C1S8 567 aa6.11□□□□□ -1.43
RTF1-203ENST00000473214 UBTFL6P0CB48 400 aaPredicted RBP6.11□□□□□ -1.43
RTF1-203ENST00000473214 UROSP10746 265 aa6.11□□□□□ -1.43
RTF1-203ENST00000473214 CDH2P19022 906 aaPredicted RBP6.11□□□□□ -1.43
RTF1-203ENST00000473214 PSMA5P28066 241 aa6.11□□□□□ -1.43
RTF1-203ENST00000473214 PRDX5P30044 214 aa6.11□□□□□ -1.43
RTF1-203ENST00000473214 ALDH1B1P30837 517 aa6.11□□□□□ -1.43
RTF1-203ENST00000473214 PRKAR1BP31321 381 aa6.11□□□□□ -1.43
RTF1-203ENST00000473214 S100A5P33763 92 aa6.11□□□□□ -1.43
RTF1-203ENST00000473214 CTSKP43235 329 aa6.11□□□□□ -1.43
RTF1-203ENST00000473214 METAP1P53582 386 aa6.11□□□□□ -1.43
RTF1-203ENST00000473214 ADARP55265 1226 aaKnown RBP6.11□□□□□ -1.43
RTF1-203ENST00000473214 ASIC1P78348 528 aa6.11□□□□□ -1.43
RTF1-203ENST00000473214 TAP2Q03519 686 aa6.11□□□□□ -1.43
RTF1-203ENST00000473214 TBL3Q12788 808 aaKnown RBP6.11□□□□□ -1.43
RTF1-203ENST00000473214 WDR43Q15061 677 aaKnown RBP eCLIP6.11□□□□□ -1.43
RTF1-203ENST00000473214 PFKFB3Q16875 520 aaPredicted RBP6.11□□□□□ -1.43
RTF1-203ENST00000473214 MCMDC2Q4G0Z9 681 aa6.11□□□□□ -1.43
RTF1-203ENST00000473214 HABP4Q5JVS0 413 aaKnown RBP6.11□□□□□ -1.43
RTF1-203ENST00000473214 SPDYAQ5MJ70 313 aa6.11□□□□□ -1.43
RTF1-203ENST00000473214 ATAD3BQ5T9A4 648 aa6.11□□□□□ -1.43
RTF1-203ENST00000473214 PRR23BQ6ZRT6 265 aa6.11□□□□□ -1.43
RTF1-203ENST00000473214 KBTBD6Q86V97 674 aa6.11□□□□□ -1.43
RTF1-203ENST00000473214 CPNE8Q86YQ8 564 aa6.11□□□□□ -1.43
RTF1-203ENST00000473214 IRF2BP1Q8IU81 584 aa6.11□□□□□ -1.43
RTF1-203ENST00000473214 CCDC83Q8IWF9 413 aa6.11□□□□□ -1.43
RTF1-203ENST00000473214 DDIASQ8IXT1 998 aa6.11□□□□□ -1.43
RTF1-203ENST00000473214 SLC7A5P1Q8MH63 180 aa6.11□□□□□ -1.43
RTF1-203ENST00000473214 KDM8Q8N371 416 aa6.11□□□□□ -1.43
RTF1-203ENST00000473214 ZCCHC7Q8N3Z6 543 aaKnown RBP6.11□□□□□ -1.43
RTF1-203ENST00000473214 LPCAT1Q8NF37 534 aa6.11□□□□□ -1.43
RTF1-203ENST00000473214 ACMSDQ8TDX5 336 aa6.11□□□□□ -1.43
RTF1-203ENST00000473214 EXT2Q93063 718 aa6.11□□□□□ -1.43
RTF1-203ENST00000473214 LRRC45Q96CN5 670 aa6.11□□□□□ -1.43
RTF1-203ENST00000473214 TMCO6Q96DC7 493 aa6.11□□□□□ -1.43
RTF1-203ENST00000473214 C19orf60Q96EN9 201 aa6.11□□□□□ -1.43
RTF1-203ENST00000473214 ARL5BQ96KC2 179 aa6.11□□□□□ -1.43
RTF1-203ENST00000473214 NUDCD1Q96RS6 583 aa6.11□□□□□ -1.43
RTF1-203ENST00000473214 INTS14Q96SY0 518 aa6.11□□□□□ -1.43
RTF1-203ENST00000473214 SLC25A23Q9BV35 468 aa6.11□□□□□ -1.43
RTF1-203ENST00000473214 RNF32Q9H0A6 362 aa6.11□□□□□ -1.43
RTF1-203ENST00000473214 C8orf33Q9H7E9 229 aaPredicted RBP6.11□□□□□ -1.43
RTF1-203ENST00000473214 TMEM206Q9H813 350 aa6.11□□□□□ -1.43
RTF1-203ENST00000473214 NGBQ9NPG2 151 aa6.11□□□□□ -1.43
RTF1-203ENST00000473214 GALNT8Q9NY28 637 aa6.11□□□□□ -1.43
RTF1-203ENST00000473214 IL20Q9NYY1 176 aa6.11□□□□□ -1.43
RTF1-203ENST00000473214 IL1RAPL1Q9NZN1 696 aa6.11□□□□□ -1.43
RTF1-203ENST00000473214 ANKMY1Q9P2S6 941 aa6.11□□□□□ -1.43
RTF1-203ENST00000473214 NCDNQ9UBB6 729 aa6.11□□□□□ -1.43
RTF1-203ENST00000473214 AMACRQ9UHK6 382 aa6.11□□□□□ -1.43
RTF1-203ENST00000473214 ITGA11Q9UKX5 1188 aa6.11□□□□□ -1.43
RTF1-203ENST00000473214 CDH7Q9ULB5 785 aa6.11□□□□□ -1.43
RTF1-203ENST00000473214 SSX2IPQ9Y2D8 614 aa6.11□□□□□ -1.43
RTF1-203ENST00000473214 STK38LQ9Y2H1 464 aa6.11□□□□□ -1.43
RTF1-203ENST00000473214 GDAQ9Y2T3 454 aa6.11□□□□□ -1.43
RTF1-203ENST00000473214 PHRF1Q9P1Y6 1649 aaKnown RBP6.1□□□□□ -1.43
RTF1-203ENST00000473214 ARHGEF10O15013 1369 aa6.1□□□□□ -1.43
RTF1-203ENST00000473214 KIAA0232Q92628 1395 aa6.1□□□□□ -1.43
RTF1-203ENST00000473214 GAKO14976 1311 aa6.1□□□□□ -1.43
RTF1-203ENST00000473214 PRAMEF25A6NGN4 478 aa6.1□□□□□ -1.43
RTF1-203ENST00000473214 WTIPA6NIX2 430 aaPredicted RBP6.1□□□□□ -1.43
RTF1-203ENST00000473214 KCNJ18B7U540 433 aa6.1□□□□□ -1.43
RTF1-203ENST00000473214 E2F3O00716 465 aa6.1□□□□□ -1.43
RTF1-203ENST00000473214 ATP2A1O14983 1001 aa6.1□□□□□ -1.43
RTF1-203ENST00000473214 GPRIN2O60269 458 aa6.1□□□□□ -1.43
RTF1-203ENST00000473214 IDH1O75874 414 aaKnown RBP6.1□□□□□ -1.43
RTF1-203ENST00000473214 SCAF4O95104 1147 aaKnown RBP6.1□□□□□ -1.43
RTF1-203ENST00000473214 POP4O95707 220 aaKnown RBP6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms