RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 C8orf4Q9NR00 106 aa10.21□□□□□ -0.78
APTX-216ENST00000472896 TMEM161AQ9NX61 479 aa10.21□□□□□ -0.78
APTX-216ENST00000472896 SPG21Q9NZD8 308 aa10.21□□□□□ -0.78
APTX-216ENST00000472896 FAM159BA6NKW6 160 aa10.2□□□□□ -0.78
APTX-216ENST00000472896 TRIM38O00635 465 aa10.2□□□□□ -0.78
APTX-216ENST00000472896 PIAS1O75925 651 aa10.2□□□□□ -0.78
APTX-216ENST00000472896 CXCL14O95715 111 aa10.2□□□□□ -0.78
APTX-216ENST00000472896 APOEP02649 317 aa10.2□□□□□ -0.78
APTX-216ENST00000472896 KRT7P08729 469 aa10.2□□□□□ -0.78
APTX-216ENST00000472896 XRCC1P18887 633 aaPredicted RBP10.2□□□□□ -0.78
APTX-216ENST00000472896 GLDCP23378 1020 aa10.2□□□□□ -0.78
APTX-216ENST00000472896 EPHA3P29320 983 aa10.2□□□□□ -0.78
APTX-216ENST00000472896 NUDT2P50583 147 aa10.2□□□□□ -0.78
APTX-216ENST00000472896 STAT5BP51692 787 aa10.2□□□□□ -0.78
APTX-216ENST00000472896 THOP1P52888 689 aa10.2□□□□□ -0.78
APTX-216ENST00000472896 ACTR2P61160 394 aa10.2□□□□□ -0.78
APTX-216ENST00000472896 PSMC5P62195 406 aa10.2□□□□□ -0.78
APTX-216ENST00000472896 MTMR1Q13613 665 aa10.2□□□□□ -0.78
APTX-216ENST00000472896 LSM12Q3MHD2 195 aaKnown RBP10.2□□□□□ -0.78
APTX-216ENST00000472896 ATP13A4Q4VNC1 1196 aa10.2□□□□□ -0.78
APTX-216ENST00000472896 AGAP7PQ5VUJ5 663 aa10.2□□□□□ -0.78
APTX-216ENST00000472896 LINC00299Q6ZSB3 139 aa10.2□□□□□ -0.78
APTX-216ENST00000472896 CYS1Q717R9 158 aa10.2□□□□□ -0.78
APTX-216ENST00000472896 PLPPR4Q7Z2D5 763 aa10.2□□□□□ -0.78
APTX-216ENST00000472896 DGLUCYQ7Z3D6 616 aa10.2□□□□□ -0.78
APTX-216ENST00000472896 TTC30AQ86WT1 665 aa10.2□□□□□ -0.78
APTX-216ENST00000472896 DAW1Q8N136 415 aa10.2□□□□□ -0.78
APTX-216ENST00000472896 SIX6OS1Q8N1H7 587 aa10.2□□□□□ -0.78
APTX-216ENST00000472896 CPSF7Q8N684 471 aaKnown RBP10.2□□□□□ -0.78
APTX-216ENST00000472896 TAMM41Q96BW9 452 aa10.2□□□□□ -0.78
APTX-216ENST00000472896 CDHR1Q96JP9 859 aa10.2□□□□□ -0.78
APTX-216ENST00000472896 CDRT15Q96T59 188 aa10.2□□□□□ -0.78
APTX-216ENST00000472896 DCUN1D5Q9BTE7 237 aa10.2□□□□□ -0.78
APTX-216ENST00000472896 EFHD1Q9BUP0 239 aa10.2□□□□□ -0.78
APTX-216ENST00000472896 ARMC7Q9H6L4 198 aa10.2□□□□□ -0.78
APTX-216ENST00000472896 KLHL11Q9NVR0 708 aa10.2□□□□□ -0.78
APTX-216ENST00000472896 SLC9A2Q9UBY0 812 aa10.2□□□□□ -0.78
APTX-216ENST00000472896 IFT52Q9Y366 437 aa10.2□□□□□ -0.78
APTX-216ENST00000472896 MYO15AQ9UKN7 3530 aa10.2□□□□□ -0.78
APTX-216ENST00000472896 EVPLQ92817 2033 aa10.19□□□□□ -0.78
APTX-216ENST00000472896 GOLGA8QA0A0J9YX86 632 aa10.19□□□□□ -0.78
APTX-216ENST00000472896 A0A1B0GTW7 788 aa10.19□□□□□ -0.78
APTX-216ENST00000472896 GOLGA8OA6NCC3 632 aa10.19□□□□□ -0.78
APTX-216ENST00000472896 GOLGA8NF8WBI6 632 aa10.19□□□□□ -0.78
APTX-216ENST00000472896 ACOT8O14734 319 aa10.19□□□□□ -0.78
APTX-216ENST00000472896 HTRA2O43464 458 aaPredicted RBP10.19□□□□□ -0.78
APTX-216ENST00000472896 H2AFYO75367 372 aaKnown RBP10.19□□□□□ -0.78
APTX-216ENST00000472896 TADA2AO75478 443 aa10.19□□□□□ -0.78
APTX-216ENST00000472896 RNASEH2AO75792 299 aaKnown RBP10.19□□□□□ -0.78
APTX-216ENST00000472896 LDHAP00338 332 aaKnown RBP10.19□□□□□ -0.78
APTX-216ENST00000472896 GSRP00390 522 aa10.19□□□□□ -0.78
APTX-216ENST00000472896 EPCAMP16422 314 aa10.19□□□□□ -0.78
APTX-216ENST00000472896 MYF6P23409 242 aa10.19□□□□□ -0.78
APTX-216ENST00000472896 PIK3R1P27986 724 aa10.19□□□□□ -0.78
APTX-216ENST00000472896 GNL1P36915 607 aaPredicted RBP10.19□□□□□ -0.78
APTX-216ENST00000472896 PSMD8P48556 350 aa10.19□□□□□ -0.78
APTX-216ENST00000472896 TMBIM6P55061 237 aa10.19□□□□□ -0.78
APTX-216ENST00000472896 GDF10P55107 478 aa10.19□□□□□ -0.78
APTX-216ENST00000472896 TRAP1Q12931 704 aaKnown RBP10.19□□□□□ -0.78
APTX-216ENST00000472896 ZNF846Q147U1 533 aa10.19□□□□□ -0.78
APTX-216ENST00000472896 KCNJ8Q15842 424 aa10.19□□□□□ -0.78
APTX-216ENST00000472896 SNRNP35Q16560 246 aaKnown RBP10.19□□□□□ -0.78
APTX-216ENST00000472896 WDR44Q5JSH3 913 aa10.19□□□□□ -0.78
APTX-216ENST00000472896 PPP4R4Q6NUP7 873 aa10.19□□□□□ -0.78
APTX-216ENST00000472896 ZCCHC23Q6ZST2 131 aa10.19□□□□□ -0.78
APTX-216ENST00000472896 ADGRF2Q8IZF7 708 aa10.19□□□□□ -0.78
APTX-216ENST00000472896 SLC39A11Q8N1S5 342 aa10.19□□□□□ -0.78
APTX-216ENST00000472896 PHTF2Q8N3S3 785 aa10.19□□□□□ -0.78
APTX-216ENST00000472896 TTC30BQ8N4P2 665 aa10.19□□□□□ -0.78
APTX-216ENST00000472896 EFCAB3Q8N7B9 438 aa10.19□□□□□ -0.78
APTX-216ENST00000472896 ANKFN1Q8N957 763 aa10.19□□□□□ -0.78
APTX-216ENST00000472896 MFSD2AQ8NA29 543 aa10.19□□□□□ -0.78
APTX-216ENST00000472896 TDRD5Q8NAT2 981 aaKnown RBP10.19□□□□□ -0.78
APTX-216ENST00000472896 PNPT1Q8TCS8 783 aaKnown RBP10.19□□□□□ -0.78
APTX-216ENST00000472896 TAS1R2Q8TE23 839 aa10.19□□□□□ -0.78
APTX-216ENST00000472896 SLC22A17Q8WUG5 538 aa10.19□□□□□ -0.78
APTX-216ENST00000472896 AUTS2Q8WXX7 1259 aa10.19□□□□□ -0.78
APTX-216ENST00000472896 CFAP36Q96G28 342 aa10.19□□□□□ -0.78
APTX-216ENST00000472896 ZNF558Q96NG5 402 aa10.19□□□□□ -0.78
APTX-216ENST00000472896 SORT1Q99523 831 aa10.19□□□□□ -0.78
APTX-216ENST00000472896 CDH19Q9H159 772 aa10.19□□□□□ -0.78
APTX-216ENST00000472896 MRPL46Q9H2W6 279 aaKnown RBP10.19□□□□□ -0.78
APTX-216ENST00000472896 ELAC1Q9H777 363 aaKnown RBP10.19□□□□□ -0.78
APTX-216ENST00000472896 VRTNQ9H8Y1 702 aa10.19□□□□□ -0.78
APTX-216ENST00000472896 POPDC2Q9HBU9 364 aa10.19□□□□□ -0.78
APTX-216ENST00000472896 JPH1Q9HDC5 661 aaPredicted RBP10.19□□□□□ -0.78
APTX-216ENST00000472896 ZC3H7BQ9UGR2 993 aaKnown RBP10.19□□□□□ -0.78
APTX-216ENST00000472896 R4GN57 208 aa10.19□□□□□ -0.78
APTX-216ENST00000472896 IGLV3-22A0A075B6J6 115 aa10.19□□□□□ -0.78
APTX-216ENST00000472896 C3orf70A6NLC5 250 aaPredicted RBP10.19□□□□□ -0.78
APTX-216ENST00000472896 ZNF839A8K0R7 811 aa10.19□□□□□ -0.78
APTX-216ENST00000472896 ZBTB42B2RXF5 422 aa10.19□□□□□ -0.78
APTX-216ENST00000472896 NT5C1B-RDH14C9J2C7 533 aa10.19□□□□□ -0.78
APTX-216ENST00000472896 APOC4-APOC2K7ER74 178 aa10.19□□□□□ -0.78
APTX-216ENST00000472896 AIM2O14862 343 aa10.19□□□□□ -0.78
APTX-216ENST00000472896 AREL1O15033 823 aa10.19□□□□□ -0.78
APTX-216ENST00000472896 GPR182O15218 404 aa10.19□□□□□ -0.78
APTX-216ENST00000472896 NDUFB5O43674 189 aa10.19□□□□□ -0.78
APTX-216ENST00000472896 PLIN3O60664 434 aa10.19□□□□□ -0.78
APTX-216ENST00000472896 LYPLA1O75608 230 aaPredicted RBP10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms