RNA–Protein interactions for RNA: ENST00000472725.5

SF1-213, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 632 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-213ENST00000472725 SEPT10Q9P0V9 454 aa20.19■□□□□ 0.82
SF1-213ENST00000472725 MBD1Q9UIS9 605 aaPredicted RBP20.19■□□□□ 0.82
SF1-213ENST00000472725 SAR1BQ9Y6B6 198 aa20.19■□□□□ 0.82
SF1-213ENST00000472725 SPAG17Q6Q759 2223 aa20.19■□□□□ 0.82
SF1-213ENST00000472725 C16orf96A6NNT2 1141 aa20.18■□□□□ 0.82
SF1-213ENST00000472725 RNF103O00237 685 aa20.18■□□□□ 0.82
SF1-213ENST00000472725 PGRMC1O00264 195 aaKnown RBP20.18■□□□□ 0.82
SF1-213ENST00000472725 TRAFD1O14545 582 aaPredicted RBP20.18■□□□□ 0.82
SF1-213ENST00000472725 PLRG1O43660 514 aaKnown RBP20.18■□□□□ 0.82
SF1-213ENST00000472725 LIASO43766 372 aa20.18■□□□□ 0.82
SF1-213ENST00000472725 SEMA4FO95754 770 aa20.18■□□□□ 0.82
SF1-213ENST00000472725 ADRB3P13945 408 aa20.18■□□□□ 0.82
SF1-213ENST00000472725 GKP32189 559 aa20.18■□□□□ 0.82
SF1-213ENST00000472725 DPP6P42658 865 aa20.18■□□□□ 0.82
SF1-213ENST00000472725 SIX1Q15475 284 aaPredicted RBP20.18■□□□□ 0.82
SF1-213ENST00000472725 PMS2CLQ68D20 193 aa20.18■□□□□ 0.82
SF1-213ENST00000472725 ITPRIPL1Q6GPH6 555 aa20.18■□□□□ 0.82
SF1-213ENST00000472725 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP20.18■□□□□ 0.82
SF1-213ENST00000472725 LPCAT2Q7L5N7 544 aa20.18■□□□□ 0.82
SF1-213ENST00000472725 OR2T34Q8NGX1 318 aa20.18■□□□□ 0.82
SF1-213ENST00000472725 IMP4Q96G21 291 aaKnown RBP20.18■□□□□ 0.82
SF1-213ENST00000472725 AGAP3Q96P47 875 aa20.18■□□□□ 0.82
SF1-213ENST00000472725 USP29Q9HBJ7 922 aa20.18■□□□□ 0.82
SF1-213ENST00000472725 GLOD4Q9HC38 313 aa20.18■□□□□ 0.82
SF1-213ENST00000472725 PREBQ9HCU5 417 aa20.18■□□□□ 0.82
SF1-213ENST00000472725 KLHL8Q9P2G9 620 aaPredicted RBP20.18■□□□□ 0.82
SF1-213ENST00000472725 RNF14Q9UBS8 474 aa20.18■□□□□ 0.82
SF1-213ENST00000472725 SERGEFQ9UGK8 458 aa20.18■□□□□ 0.82
SF1-213ENST00000472725 RAB23Q9ULC3 237 aa20.18■□□□□ 0.82
SF1-213ENST00000472725 DRG1Q9Y295 367 aaKnown RBP20.18■□□□□ 0.82
SF1-213ENST00000472725 R3HDM2Q9Y2K5 976 aaKnown RBP20.18■□□□□ 0.82
SF1-213ENST00000472725 R4GN57 208 aa20.18■□□□□ 0.82
SF1-213ENST00000472725 CEP192Q8TEP8 1941 aa20.17■□□□□ 0.82
SF1-213ENST00000472725 C5orf60A6NFR6 353 aa20.17■□□□□ 0.82
SF1-213ENST00000472725 PROB1E7EW31 1015 aa20.17■□□□□ 0.82
SF1-213ENST00000472725 KCNN4O15554 427 aa20.17■□□□□ 0.82
SF1-213ENST00000472725 OPHN1O60890 802 aa20.17■□□□□ 0.82
SF1-213ENST00000472725 ITGAVP06756 1048 aa20.17■□□□□ 0.82
SF1-213ENST00000472725 ACSL1P33121 698 aa20.17■□□□□ 0.82
SF1-213ENST00000472725 ADPRHP54922 357 aa20.17■□□□□ 0.82
SF1-213ENST00000472725 RPL26P61254 145 aaKnown RBP20.17■□□□□ 0.82
SF1-213ENST00000472725 RPL6Q02878 288 aaKnown RBP20.17■□□□□ 0.82
SF1-213ENST00000472725 OASLQ15646 514 aaKnown RBP20.17■□□□□ 0.82
SF1-213ENST00000472725 PLK5Q496M5 336 aa20.17■□□□□ 0.82
SF1-213ENST00000472725 NYAP1Q6ZVC0 841 aa20.17■□□□□ 0.82
SF1-213ENST00000472725 PARS2Q7L3T8 475 aaKnown RBP20.17■□□□□ 0.82
SF1-213ENST00000472725 PID1Q7Z2X4 250 aa20.17■□□□□ 0.82
SF1-213ENST00000472725 CAMK1DQ8IU85 385 aa20.17■□□□□ 0.82
SF1-213ENST00000472725 ZNF567Q8N184 647 aa20.17■□□□□ 0.82
SF1-213ENST00000472725 OR14C36Q8NHC7 312 aa20.17■□□□□ 0.82
SF1-213ENST00000472725 RTP4Q96DX8 246 aa20.17■□□□□ 0.82
SF1-213ENST00000472725 VPS45Q9NRW7 570 aa20.17■□□□□ 0.82
SF1-213ENST00000472725 DNPEPQ9ULA0 475 aa20.17■□□□□ 0.82
SF1-213ENST00000472725 RPL26L1Q9UNX3 145 aaKnown RBP20.17■□□□□ 0.82
SF1-213ENST00000472725 TTLL3Q9Y4R7 772 aa20.17■□□□□ 0.82
SF1-213ENST00000472725 THADAQ6YHU6 1953 aa20.16■□□□□ 0.82
SF1-213ENST00000472725 C10orf142B7Z368 130 aa20.16■□□□□ 0.82
SF1-213ENST00000472725 PIGNO95427 931 aa20.16■□□□□ 0.82
SF1-213ENST00000472725 BCKDHBP21953 392 aa20.16■□□□□ 0.82
SF1-213ENST00000472725 NUDT1P36639 197 aa20.16■□□□□ 0.82
SF1-213ENST00000472725 METAP1P53582 386 aa20.16■□□□□ 0.82
SF1-213ENST00000472725 DSC2Q02487 901 aa20.16■□□□□ 0.82
SF1-213ENST00000472725 ELP6Q0PNE2 266 aa20.16■□□□□ 0.82
SF1-213ENST00000472725 UGP2Q16851 508 aa20.16■□□□□ 0.82
SF1-213ENST00000472725 TTC7BQ86TV6 843 aa20.16■□□□□ 0.82
SF1-213ENST00000472725 FAM124AQ86V42 546 aa20.16■□□□□ 0.82
SF1-213ENST00000472725 NDUFAF2Q8N183 169 aa20.16■□□□□ 0.82
SF1-213ENST00000472725 C17orf53Q8N3J3 647 aaPredicted RBP20.16■□□□□ 0.82
SF1-213ENST00000472725 FAM160A2Q8N612 972 aaPredicted RBP20.16■□□□□ 0.82
SF1-213ENST00000472725 COG1Q8WTW3 980 aa20.16■□□□□ 0.82
SF1-213ENST00000472725 TADA1Q96BN2 335 aa20.16■□□□□ 0.82
SF1-213ENST00000472725 SPATA13Q96N96 652 aa20.16■□□□□ 0.82
SF1-213ENST00000472725 FCRL5Q96RD9 977 aa20.16■□□□□ 0.82
SF1-213ENST00000472725 GPR174Q9BXC1 333 aa20.16■□□□□ 0.82
SF1-213ENST00000472725 CD93Q9NPY3 652 aa20.16■□□□□ 0.82
SF1-213ENST00000472725 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.16■□□□□ 0.82
SF1-213ENST00000472725 INVSQ9Y283 1065 aa20.16■□□□□ 0.82
SF1-213ENST00000472725 METTL12A8MUP2 240 aa20.15■□□□□ 0.82
SF1-213ENST00000472725 UPK3BL1B0FP48 263 aa20.15■□□□□ 0.82
SF1-213ENST00000472725 UPK3BL2E5RIL1 263 aa20.15■□□□□ 0.82
SF1-213ENST00000472725 KIF2AO00139 706 aaPredicted RBP20.15■□□□□ 0.82
SF1-213ENST00000472725 TSPAN6O43657 245 aa20.15■□□□□ 0.82
SF1-213ENST00000472725 GCATO75600 419 aa20.15■□□□□ 0.82
SF1-213ENST00000472725 XPAP23025 273 aaPredicted RBP20.15■□□□□ 0.82
SF1-213ENST00000472725 CASQ1P31415 396 aa20.15■□□□□ 0.82
SF1-213ENST00000472725 CCR5P51681 352 aa20.15■□□□□ 0.82
SF1-213ENST00000472725 NIPAL4Q0D2K0 466 aa20.15■□□□□ 0.82
SF1-213ENST00000472725 SRSF5Q13243 272 aaKnown RBP20.15■□□□□ 0.82
SF1-213ENST00000472725 POM121L1PQ3SYA9 428 aa20.15■□□□□ 0.82
SF1-213ENST00000472725 ANKRD20A2Q5SQ80 823 aa20.15■□□□□ 0.82
SF1-213ENST00000472725 ARMC12Q5T9G4 340 aa20.15■□□□□ 0.82
SF1-213ENST00000472725 ANKRD20A1Q5TYW2 823 aa20.15■□□□□ 0.82
SF1-213ENST00000472725 ANKRD20A3Q5VUR7 823 aa20.15■□□□□ 0.82
SF1-213ENST00000472725 B4GALNT4Q76KP1 1039 aa20.15■□□□□ 0.82
SF1-213ENST00000472725 ADAT2Q7Z6V5 191 aaKnown RBP20.15■□□□□ 0.82
SF1-213ENST00000472725 FRMD1Q8N878 549 aa20.15■□□□□ 0.82
SF1-213ENST00000472725 C1orf54Q8WWF1 131 aa20.15■□□□□ 0.82
SF1-213ENST00000472725 FAM118BQ9BPY3 351 aa20.15■□□□□ 0.82
SF1-213ENST00000472725 PHTF1Q9UMS5 762 aa20.15■□□□□ 0.82
SF1-213ENST00000472725 ZNF148Q9UQR1 794 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms