RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 C12orf56Q8IXR9 622 aa3.67□□□□□ -1.82
XRN1-209ENST00000472625 IQUBQ8NA54 791 aa3.67□□□□□ -1.82
XRN1-209ENST00000472625 XXYLT1Q8NBI6 393 aa3.67□□□□□ -1.82
XRN1-209ENST00000472625 CHST14Q8NCH0 376 aa3.67□□□□□ -1.82
XRN1-209ENST00000472625 KBTBD7Q8WVZ9 684 aa3.67□□□□□ -1.82
XRN1-209ENST00000472625 ADAMTS14Q8WXS8 1223 aa3.67□□□□□ -1.82
XRN1-209ENST00000472625 GOLGA1Q92805 767 aa3.67□□□□□ -1.82
XRN1-209ENST00000472625 NINJ1Q92982 152 aa3.67□□□□□ -1.82
XRN1-209ENST00000472625 CCDC47Q96A33 483 aaKnown RBP3.67□□□□□ -1.82
XRN1-209ENST00000472625 TMX3Q96JJ7 454 aa3.67□□□□□ -1.82
XRN1-209ENST00000472625 SLC22A12Q96S37 553 aa3.67□□□□□ -1.82
XRN1-209ENST00000472625 CYP2S1Q96SQ9 504 aa3.67□□□□□ -1.82
XRN1-209ENST00000472625 CGRRF1Q99675 332 aa3.67□□□□□ -1.82
XRN1-209ENST00000472625 GABRG3Q99928 467 aa3.67□□□□□ -1.82
XRN1-209ENST00000472625 CBWD1Q9BRT8 395 aa3.67□□□□□ -1.82
XRN1-209ENST00000472625 MED10Q9BTT4 135 aa3.67□□□□□ -1.82
XRN1-209ENST00000472625 BOCQ9BWV1 1114 aa3.67□□□□□ -1.82
XRN1-209ENST00000472625 STRA6Q9BX79 667 aa3.67□□□□□ -1.82
XRN1-209ENST00000472625 BBS2Q9BXC9 721 aa3.67□□□□□ -1.82
XRN1-209ENST00000472625 DCLK3Q9C098 648 aa3.67□□□□□ -1.82
XRN1-209ENST00000472625 SCAND2PQ9GZW5 306 aaPredicted RBP3.67□□□□□ -1.82
XRN1-209ENST00000472625 PDE11AQ9HCR9 933 aa3.67□□□□□ -1.82
XRN1-209ENST00000472625 SPHK2Q9NRA0 654 aa3.67□□□□□ -1.82
XRN1-209ENST00000472625 PANK4Q9NVE7 773 aa3.67□□□□□ -1.82
XRN1-209ENST00000472625 TMLHEQ9NVH6 421 aa3.67□□□□□ -1.82
XRN1-209ENST00000472625 DNAJC17Q9NVM6 304 aaKnown RBP3.67□□□□□ -1.82
XRN1-209ENST00000472625 GALNT8Q9NY28 637 aa3.67□□□□□ -1.82
XRN1-209ENST00000472625 H2AFY2Q9P0M6 372 aaPredicted RBP3.67□□□□□ -1.82
XRN1-209ENST00000472625 CALCOCO1Q9P1Z2 691 aa3.67□□□□□ -1.82
XRN1-209ENST00000472625 DKK4Q9UBT3 224 aa3.67□□□□□ -1.82
XRN1-209ENST00000472625 FTSJ1Q9UET6 329 aa3.67□□□□□ -1.82
XRN1-209ENST00000472625 ASB1Q9Y576 335 aa3.67□□□□□ -1.82
XRN1-209ENST00000472625 CELSR3Q9NYQ7 3312 aa3.67□□□□□ -1.82
XRN1-209ENST00000472625 DMXL2Q8TDJ6 3036 aa3.67□□□□□ -1.82
XRN1-209ENST00000472625 PDCD11Q14690 1871 aaKnown RBP3.67□□□□□ -1.82
XRN1-209ENST00000472625 FAM92AA1XBS5 289 aa3.66□□□□□ -1.82
XRN1-209ENST00000472625 TYW5A2RUC4 315 aaKnown RBP3.66□□□□□ -1.82
XRN1-209ENST00000472625 NPEPPSL1A6NEC2 478 aa3.66□□□□□ -1.82
XRN1-209ENST00000472625 ZNF891A8MT65 544 aaPredicted RBP3.66□□□□□ -1.82
XRN1-209ENST00000472625 PATE3B3GLJ2 98 aa3.66□□□□□ -1.82
XRN1-209ENST00000472625 NEDD8-MDP1E9PL57 170 aa3.66□□□□□ -1.82
XRN1-209ENST00000472625 SGK1O00141 431 aa3.66□□□□□ -1.82
XRN1-209ENST00000472625 IKBKBO14920 756 aa3.66□□□□□ -1.82
XRN1-209ENST00000472625 GSTA4O15217 222 aa3.66□□□□□ -1.82
XRN1-209ENST00000472625 COCHO43405 550 aa3.66□□□□□ -1.82
XRN1-209ENST00000472625 TIMM44O43615 452 aa3.66□□□□□ -1.82
XRN1-209ENST00000472625 STX10O60499 249 aa3.66□□□□□ -1.82
XRN1-209ENST00000472625 EXOC3O60645 756 aa3.66□□□□□ -1.82
XRN1-209ENST00000472625 PPP6R2O75170 966 aa3.66□□□□□ -1.82
XRN1-209ENST00000472625 FSHBP01225 129 aa3.66□□□□□ -1.82
XRN1-209ENST00000472625 PRLP01236 227 aa3.66□□□□□ -1.82
XRN1-209ENST00000472625 PDGFRBP09619 1106 aa3.66□□□□□ -1.82
XRN1-209ENST00000472625 ZDHHC11BP0C7U3 371 aa3.66□□□□□ -1.82
XRN1-209ENST00000472625 FTH1P19P0C7X4 201 aa3.66□□□□□ -1.82
XRN1-209ENST00000472625 JMJD7P0C870 316 aa3.66□□□□□ -1.82
XRN1-209ENST00000472625 TYRP14679 529 aa3.66□□□□□ -1.82
XRN1-209ENST00000472625 HNRNPLP14866 589 aaKnown RBP eCLIP3.66□□□□□ -1.82
XRN1-209ENST00000472625 BCKDHBP21953 392 aa3.66□□□□□ -1.82
XRN1-209ENST00000472625 MATKP42679 507 aa3.66□□□□□ -1.82
XRN1-209ENST00000472625 GRK6P43250 576 aa3.66□□□□□ -1.82
XRN1-209ENST00000472625 CCT8P50990 548 aa3.66□□□□□ -1.82
XRN1-209ENST00000472625 CDH8P55286 799 aa3.66□□□□□ -1.82
XRN1-209ENST00000472625 ASIC1P78348 528 aa3.66□□□□□ -1.82
XRN1-209ENST00000472625 IRX4P78413 519 aa3.66□□□□□ -1.82
XRN1-209ENST00000472625 COG7P83436 770 aa3.66□□□□□ -1.82
XRN1-209ENST00000472625 CD83Q01151 205 aa3.66□□□□□ -1.82
XRN1-209ENST00000472625 CYP24A1Q07973 514 aa3.66□□□□□ -1.82
XRN1-209ENST00000472625 STK38Q15208 465 aa3.66□□□□□ -1.82
XRN1-209ENST00000472625 BMT2Q1RMZ1 405 aa3.66□□□□□ -1.82
XRN1-209ENST00000472625 SGSM1Q2NKQ1 1148 aa3.66□□□□□ -1.82
XRN1-209ENST00000472625 LY6G5CQ5SRR4 150 aa3.66□□□□□ -1.82
XRN1-209ENST00000472625 EMC10Q5UCC4 262 aa3.66□□□□□ -1.82
XRN1-209ENST00000472625 PIK3R6Q5UE93 754 aa3.66□□□□□ -1.82
XRN1-209ENST00000472625 SDHAF4Q5VUM1 108 aa3.66□□□□□ -1.82
XRN1-209ENST00000472625 CNNM4Q6P4Q7 775 aa3.66□□□□□ -1.82
XRN1-209ENST00000472625 RHBDF2Q6PJF5 856 aa3.66□□□□□ -1.82
XRN1-209ENST00000472625 ARHGEF18Q6ZSZ5 1173 aa3.66□□□□□ -1.82
XRN1-209ENST00000472625 HTR3DQ70Z44 454 aa3.66□□□□□ -1.82
XRN1-209ENST00000472625 CBWD2Q8IUF1 395 aa3.66□□□□□ -1.82
XRN1-209ENST00000472625 CCDC117Q8IWD4 279 aaPredicted RBP3.66□□□□□ -1.82
XRN1-209ENST00000472625 ZNF276Q8N554 614 aa3.66□□□□□ -1.82
XRN1-209ENST00000472625 CCDC33Q8N5R6 958 aa3.66□□□□□ -1.82
XRN1-209ENST00000472625 TRIML1Q8N9V2 468 aa3.66□□□□□ -1.82
XRN1-209ENST00000472625 LSM14AQ8ND56 463 aaKnown RBP3.66□□□□□ -1.82
XRN1-209ENST00000472625 IPO4Q8TEX9 1081 aaKnown RBP3.66□□□□□ -1.82
XRN1-209ENST00000472625 TMEM174Q8WUU8 243 aa3.66□□□□□ -1.82
XRN1-209ENST00000472625 PRCCQ92733 491 aaPredicted RBP3.66□□□□□ -1.82
XRN1-209ENST00000472625 DVL3Q92997 716 aaPredicted RBP3.66□□□□□ -1.82
XRN1-209ENST00000472625 DNAJC19Q96DA6 116 aa3.66□□□□□ -1.82
XRN1-209ENST00000472625 NXPE2Q96DL1 559 aa3.66□□□□□ -1.82
XRN1-209ENST00000472625 ZNF419Q96HQ0 510 aaPredicted RBP3.66□□□□□ -1.82
XRN1-209ENST00000472625 FAXDC2Q96IV6 333 aa3.66□□□□□ -1.82
XRN1-209ENST00000472625 ZNF396Q96N95 335 aaPredicted RBP3.66□□□□□ -1.82
XRN1-209ENST00000472625 NUP58Q9BVL2 599 aa3.66□□□□□ -1.82
XRN1-209ENST00000472625 BTBD2Q9BX70 525 aa3.66□□□□□ -1.82
XRN1-209ENST00000472625 SLC2A11Q9BYW1 496 aa3.66□□□□□ -1.82
XRN1-209ENST00000472625 TRIM9Q9C026 710 aa3.66□□□□□ -1.82
XRN1-209ENST00000472625 OR10A5Q9H207 317 aa3.66□□□□□ -1.82
XRN1-209ENST00000472625 PRDM16Q9HAZ2 1276 aa3.66□□□□□ -1.82
XRN1-209ENST00000472625 FBRSL1Q9HCM7 1045 aaKnown RBP3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms