RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 TMF1P82094 1093 aa5.88□□□□□ -1.47
CCDC39-202ENST00000471307 LRRC24Q50LG9 513 aa5.88□□□□□ -1.47
CCDC39-202ENST00000471307 FAM216AQ8WUB2 273 aa5.88□□□□□ -1.47
CCDC39-202ENST00000471307 ADAMTS14Q8WXS8 1223 aa5.88□□□□□ -1.47
CCDC39-202ENST00000471307 THAP4Q8WY91 577 aa5.88□□□□□ -1.47
CCDC39-202ENST00000471307 GOLGA1Q92805 767 aa5.88□□□□□ -1.47
CCDC39-202ENST00000471307 GFM1Q96RP9 751 aaKnown RBP5.88□□□□□ -1.47
CCDC39-202ENST00000471307 TESK2Q96S53 571 aa5.88□□□□□ -1.47
CCDC39-202ENST00000471307 STK26Q9P289 416 aa5.88□□□□□ -1.47
CCDC39-202ENST00000471307 PLEKHB1Q9UF11 243 aaPredicted RBP5.88□□□□□ -1.47
CCDC39-202ENST00000471307 CENPJQ9HC77 1338 aaPredicted RBP5.88□□□□□ -1.47
CCDC39-202ENST00000471307 METP08581 1390 aa5.88□□□□□ -1.47
CCDC39-202ENST00000471307 LRPPRCP42704 1394 aaKnown RBP5.88□□□□□ -1.47
CCDC39-202ENST00000471307 NPHP4O75161 1426 aaPredicted RBP5.88□□□□□ -1.47
CCDC39-202ENST00000471307 YTHDC2Q9H6S0 1430 aaKnown RBP5.88□□□□□ -1.47
CCDC39-202ENST00000471307 DIP2AQ14689 1571 aa5.88□□□□□ -1.47
CCDC39-202ENST00000471307 NRXN3Q9Y4C0 1643 aa5.88□□□□□ -1.47
CCDC39-202ENST00000471307 IQGAP1P46940 1657 aa5.88□□□□□ -1.47
CCDC39-202ENST00000471307 FAM155BO75949 473 aa5.87□□□□□ -1.47
CCDC39-202ENST00000471307 YWHAQP27348 245 aa5.87□□□□□ -1.47
CCDC39-202ENST00000471307 RFC1P35251 1148 aaPredicted RBP5.87□□□□□ -1.47
CCDC39-202ENST00000471307 GPR12P47775 334 aa5.87□□□□□ -1.47
CCDC39-202ENST00000471307 GAS1P54826 345 aa5.87□□□□□ -1.47
CCDC39-202ENST00000471307 TMPRSS3P57727 454 aa5.87□□□□□ -1.47
CCDC39-202ENST00000471307 CHAF1AQ13111 956 aaPredicted RBP5.87□□□□□ -1.47
CCDC39-202ENST00000471307 HNF4GQ14541 408 aa5.87□□□□□ -1.47
CCDC39-202ENST00000471307 ZNF284Q2VY69 593 aa5.87□□□□□ -1.47
CCDC39-202ENST00000471307 TBC1D9BQ66K14 1250 aa5.87□□□□□ -1.47
CCDC39-202ENST00000471307 SYNE3Q6ZMZ3 975 aa5.87□□□□□ -1.47
CCDC39-202ENST00000471307 CLIP4Q8N3C7 705 aa5.87□□□□□ -1.47
CCDC39-202ENST00000471307 OR14A16Q8NHC5 309 aa5.87□□□□□ -1.47
CCDC39-202ENST00000471307 NCSTNQ92542 709 aa5.87□□□□□ -1.47
CCDC39-202ENST00000471307 ACAD9Q9H845 621 aa5.87□□□□□ -1.47
CCDC39-202ENST00000471307 GRHPRQ9UBQ7 328 aa5.87□□□□□ -1.47
CCDC39-202ENST00000471307 TAGLN3Q9UI15 199 aa5.87□□□□□ -1.47
CCDC39-202ENST00000471307 SETD1AO15047 1707 aaKnown RBP5.87□□□□□ -1.47
CCDC39-202ENST00000471307 POLR1AO95602 1720 aaPredicted RBP5.86□□□□□ -1.47
CCDC39-202ENST00000471307 DLC1Q96QB1 1528 aa5.86□□□□□ -1.47
CCDC39-202ENST00000471307 TECPR2O15040 1411 aa5.86□□□□□ -1.47
CCDC39-202ENST00000471307 FAM135BQ49AJ0 1406 aa5.86□□□□□ -1.47
CCDC39-202ENST00000471307 A0A0A0MQY5 61 aa5.86□□□□□ -1.47
CCDC39-202ENST00000471307 OR6C68A6NDL8 312 aa5.86□□□□□ -1.47
CCDC39-202ENST00000471307 IPO5O00410 1097 aaKnown RBP5.86□□□□□ -1.47
CCDC39-202ENST00000471307 FCGR1AP12314 374 aa5.86□□□□□ -1.47
CCDC39-202ENST00000471307 VEGFAP15692 232 aaPredicted RBP5.86□□□□□ -1.47
CCDC39-202ENST00000471307 NAGAP17050 411 aa5.86□□□□□ -1.47
CCDC39-202ENST00000471307 MT3P25713 68 aa5.86□□□□□ -1.47
CCDC39-202ENST00000471307 DPP6P42658 865 aa5.86□□□□□ -1.47
CCDC39-202ENST00000471307 AMTP48728 403 aa5.86□□□□□ -1.47
CCDC39-202ENST00000471307 PMS2P54278 862 aa5.86□□□□□ -1.47
CCDC39-202ENST00000471307 PRKAA2P54646 552 aa5.86□□□□□ -1.47
CCDC39-202ENST00000471307 HSPA2P54652 639 aa5.86□□□□□ -1.47
CCDC39-202ENST00000471307 MON1BQ7L1V2 547 aa5.86□□□□□ -1.47
CCDC39-202ENST00000471307 PATL1Q86TB9 770 aaKnown RBP5.86□□□□□ -1.47
CCDC39-202ENST00000471307 TRIM74Q86UV6 250 aa5.86□□□□□ -1.47
CCDC39-202ENST00000471307 TRIM73Q86UV7 250 aa5.86□□□□□ -1.47
CCDC39-202ENST00000471307 RBFAQ8N0V3 343 aa5.86□□□□□ -1.47
CCDC39-202ENST00000471307 GALNT15Q8N3T1 639 aa5.86□□□□□ -1.47
CCDC39-202ENST00000471307 PRAM1Q96QH2 718 aa5.86□□□□□ -1.47
CCDC39-202ENST00000471307 PSMD1Q99460 953 aa5.86□□□□□ -1.47
CCDC39-202ENST00000471307 ASXL1Q8IXJ9 1541 aa5.85□□□□□ -1.47
CCDC39-202ENST00000471307 CCDC7Q96M83 1385 aa5.85□□□□□ -1.47
CCDC39-202ENST00000471307 KIF7Q2M1P5 1343 aa5.85□□□□□ -1.47
CCDC39-202ENST00000471307 EVC2Q86UK5 1308 aa5.85□□□□□ -1.47
CCDC39-202ENST00000471307 A0A096LPK6 155 aa5.85□□□□□ -1.47
CCDC39-202ENST00000471307 CLDN7O95471 211 aa5.85□□□□□ -1.47
CCDC39-202ENST00000471307 AARSP49588 968 aaKnown RBP eCLIP5.85□□□□□ -1.47
CCDC39-202ENST00000471307 KIF5AQ12840 1032 aa5.85□□□□□ -1.47
CCDC39-202ENST00000471307 BYSLQ13895 437 aaKnown RBP5.85□□□□□ -1.47
CCDC39-202ENST00000471307 PDCD2Q16342 344 aaPredicted RBP5.85□□□□□ -1.47
CCDC39-202ENST00000471307 HLFQ16534 295 aa5.85□□□□□ -1.47
CCDC39-202ENST00000471307 EFHC1Q5JVL4 640 aa5.85□□□□□ -1.47
CCDC39-202ENST00000471307 ENAHQ8N8S7 591 aaPredicted RBP5.85□□□□□ -1.47
CCDC39-202ENST00000471307 TRAPPC12Q8WVT3 735 aa5.85□□□□□ -1.47
CCDC39-202ENST00000471307 RUBCNQ92622 972 aa5.85□□□□□ -1.47
CCDC39-202ENST00000471307 MPHOSPH6Q99547 160 aaKnown RBP5.85□□□□□ -1.47
CCDC39-202ENST00000471307 PAGR1Q9BTK6 254 aa5.85□□□□□ -1.47
CCDC39-202ENST00000471307 VPS33BQ9H267 617 aa5.85□□□□□ -1.47
CCDC39-202ENST00000471307 CHD2O14647 1828 aaKnown RBP5.84□□□□□ -1.47
CCDC39-202ENST00000471307 IGHV4-28A0A0C4DH34 117 aa5.84□□□□□ -1.47
CCDC39-202ENST00000471307 DDTLA6NHG4 134 aaPredicted RBP5.84□□□□□ -1.47
CCDC39-202ENST00000471307 C17orf100A8MU93 164 aa5.84□□□□□ -1.47
CCDC39-202ENST00000471307 KRT86O43790 486 aa5.84□□□□□ -1.47
CCDC39-202ENST00000471307 KRT38O76015 456 aa5.84□□□□□ -1.47
CCDC39-202ENST00000471307 CSF1P09603 554 aa5.84□□□□□ -1.47
CCDC39-202ENST00000471307 THPOP40225 353 aa5.84□□□□□ -1.47
CCDC39-202ENST00000471307 MTNR1AP48039 350 aa5.84□□□□□ -1.47
CCDC39-202ENST00000471307 RRP1P56182 461 aaKnown RBP5.84□□□□□ -1.47
CCDC39-202ENST00000471307 ARHGAP8P85298 464 aa5.84□□□□□ -1.47
CCDC39-202ENST00000471307 GOLGA8FQ08AF8 430 aa5.84□□□□□ -1.47
CCDC39-202ENST00000471307 DDX10Q13206 875 aaKnown RBP5.84□□□□□ -1.47
CCDC39-202ENST00000471307 KRT81Q14533 505 aa5.84□□□□□ -1.47
CCDC39-202ENST00000471307 TIGD6Q17RP2 521 aa5.84□□□□□ -1.47
CCDC39-202ENST00000471307 PRAMEF19Q5SWL8 479 aa5.84□□□□□ -1.47
CCDC39-202ENST00000471307 JMJD6Q6NYC1 403 aaPredicted RBP5.84□□□□□ -1.47
CCDC39-202ENST00000471307 CREB3L2Q70SY1 520 aa5.84□□□□□ -1.47
CCDC39-202ENST00000471307 VPS37AQ8NEZ2 397 aa5.84□□□□□ -1.47
CCDC39-202ENST00000471307 TMEM18Q96B42 140 aa5.84□□□□□ -1.47
CCDC39-202ENST00000471307 PPP1R10Q96QC0 940 aaKnown RBP5.84□□□□□ -1.47
CCDC39-202ENST00000471307 HERC2P3Q9BVR0 1158 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms