RNA–Protein interactions for RNA: ENST00000470824.1

PRPF3-204, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 898 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-204ENST00000470824 SCAND2PQ9GZW5 306 aaPredicted RBP4.26□□□□□ -1.73
PRPF3-204ENST00000470824 SH2D4AQ9H788 454 aa4.26□□□□□ -1.73
PRPF3-204ENST00000470824 AAMDCQ9H7C9 122 aa4.26□□□□□ -1.73
PRPF3-204ENST00000470824 SCPEP1Q9HB40 452 aa4.26□□□□□ -1.73
PRPF3-204ENST00000470824 WDR6Q9NNW5 1121 aaKnown RBP4.26□□□□□ -1.73
PRPF3-204ENST00000470824 SPAG4Q9NPE6 437 aa4.26□□□□□ -1.73
PRPF3-204ENST00000470824 PNRC2Q9NPJ4 139 aaKnown RBP4.26□□□□□ -1.73
PRPF3-204ENST00000470824 ASAH2Q9NR71 780 aa4.26□□□□□ -1.73
PRPF3-204ENST00000470824 SMYD2Q9NRG4 433 aa4.26□□□□□ -1.73
PRPF3-204ENST00000470824 SPATS2LQ9NUQ6 558 aaKnown RBP4.26□□□□□ -1.73
PRPF3-204ENST00000470824 DLGAP2Q9P1A6 1054 aa4.26□□□□□ -1.73
PRPF3-204ENST00000470824 SEL1LQ9UBV2 794 aa4.26□□□□□ -1.73
PRPF3-204ENST00000470824 PLEKHB1Q9UF11 243 aaPredicted RBP4.26□□□□□ -1.73
PRPF3-204ENST00000470824 FNDC1Q4ZHG4 1894 aaPredicted RBP4.26□□□□□ -1.73
PRPF3-204ENST00000470824 DCAF1Q9Y4B6 1507 aa4.26□□□□□ -1.73
PRPF3-204ENST00000470824 UTYO14607 1347 aa4.25□□□□□ -1.73
PRPF3-204ENST00000470824 TRBV5-3A0A0A0MS03 114 aa4.25□□□□□ -1.73
PRPF3-204ENST00000470824 SNAP23O00161 211 aa4.25□□□□□ -1.73
PRPF3-204ENST00000470824 TP73O15350 636 aa4.25□□□□□ -1.73
PRPF3-204ENST00000470824 SEC14L5O43304 696 aa4.25□□□□□ -1.73
PRPF3-204ENST00000470824 IPO7O95373 1038 aaKnown RBP4.25□□□□□ -1.73
PRPF3-204ENST00000470824 TOP3BO95985 862 aaKnown RBP4.25□□□□□ -1.73
PRPF3-204ENST00000470824 MT-CYBP00156 380 aaPredicted RBP4.25□□□□□ -1.73
PRPF3-204ENST00000470824 HOXB5P09067 269 aa4.25□□□□□ -1.73
PRPF3-204ENST00000470824 CTPS1P17812 591 aa4.25□□□□□ -1.73
PRPF3-204ENST00000470824 ATP5F1P24539 256 aaPredicted RBP4.25□□□□□ -1.73
PRPF3-204ENST00000470824 MPGP29372 298 aa4.25□□□□□ -1.73
PRPF3-204ENST00000470824 CDAP32320 146 aa4.25□□□□□ -1.73
PRPF3-204ENST00000470824 RYKP34925 604 aa4.25□□□□□ -1.73
PRPF3-204ENST00000470824 ACTN2P35609 894 aa4.25□□□□□ -1.73
PRPF3-204ENST00000470824 PIP4K2AP48426 406 aaPredicted RBP4.25□□□□□ -1.73
PRPF3-204ENST00000470824 CLDN2P57739 230 aa4.25□□□□□ -1.73
PRPF3-204ENST00000470824 NLRP5P59047 1200 aa4.25□□□□□ -1.73
PRPF3-204ENST00000470824 ID2Q02363 134 aa4.25□□□□□ -1.73
PRPF3-204ENST00000470824 ZNF91Q05481 1191 aa4.25□□□□□ -1.73
PRPF3-204ENST00000470824 NIPAL4Q0D2K0 466 aa4.25□□□□□ -1.73
PRPF3-204ENST00000470824 AIMP2Q13155 320 aaKnown RBP4.25□□□□□ -1.73
PRPF3-204ENST00000470824 C6orf10Q5SRN2 563 aa4.25□□□□□ -1.73
PRPF3-204ENST00000470824 MFSD4BQ5TF39 518 aa4.25□□□□□ -1.73
PRPF3-204ENST00000470824 ZNF793Q6ZN11 406 aa4.25□□□□□ -1.73
PRPF3-204ENST00000470824 ENOSF1Q7L5Y1 443 aa4.25□□□□□ -1.73
PRPF3-204ENST00000470824 RD3Q7Z3Z2 195 aa4.25□□□□□ -1.73
PRPF3-204ENST00000470824 SRBD1Q8N5C6 995 aaKnown RBP4.25□□□□□ -1.73
PRPF3-204ENST00000470824 LRRC57Q8N9N7 239 aa4.25□□□□□ -1.73
PRPF3-204ENST00000470824 SLC44A5Q8NCS7 719 aa4.25□□□□□ -1.73
PRPF3-204ENST00000470824 C1orf131Q8NDD1 294 aaKnown RBP4.25□□□□□ -1.73
PRPF3-204ENST00000470824 RNF183Q96D59 192 aa4.25□□□□□ -1.73
PRPF3-204ENST00000470824 WDFY2Q96P53 400 aa4.25□□□□□ -1.73
PRPF3-204ENST00000470824 SIN3AQ96ST3 1273 aa4.25□□□□□ -1.73
PRPF3-204ENST00000470824 WDR83Q9BRX9 315 aaKnown RBP4.25□□□□□ -1.73
PRPF3-204ENST00000470824 R3HDMLQ9H3Y0 253 aa4.25□□□□□ -1.73
PRPF3-204ENST00000470824 POLR1BQ9H9Y6 1135 aa4.25□□□□□ -1.73
PRPF3-204ENST00000470824 THSD1Q9NS62 852 aa4.25□□□□□ -1.73
PRPF3-204ENST00000470824 SLC6A13Q9NSD5 602 aa4.25□□□□□ -1.73
PRPF3-204ENST00000470824 ANKEF1Q9NU02 776 aa4.25□□□□□ -1.73
PRPF3-204ENST00000470824 NKIRAS2Q9NYR9 191 aa4.25□□□□□ -1.73
PRPF3-204ENST00000470824 TMEM5Q9Y2B1 443 aa4.25□□□□□ -1.73
PRPF3-204ENST00000470824 ADAM18Q9Y3Q7 739 aa4.25□□□□□ -1.73
PRPF3-204ENST00000470824 RPS6KL1Q9Y6S9 549 aa4.25□□□□□ -1.73
PRPF3-204ENST00000470824 SMIM35A0A1B0GVV1 85 aa4.24□□□□□ -1.73
PRPF3-204ENST00000470824 FRMD3A2A2Y4 597 aa4.24□□□□□ -1.73
PRPF3-204ENST00000470824 AGAP14A8MT82 685 aa4.24□□□□□ -1.73
PRPF3-204ENST00000470824 HSPB6O14558 160 aa4.24□□□□□ -1.73
PRPF3-204ENST00000470824 TCERG1O14776 1098 aaKnown RBP4.24□□□□□ -1.73
PRPF3-204ENST00000470824 BCAR3O75815 825 aa4.24□□□□□ -1.73
PRPF3-204ENST00000470824 STARD3NLO95772 234 aa4.24□□□□□ -1.73
PRPF3-204ENST00000470824 MMP3P08254 477 aa4.24□□□□□ -1.73
PRPF3-204ENST00000470824 ENO3P13929 434 aaPredicted RBP4.24□□□□□ -1.73
PRPF3-204ENST00000470824 EDN2P20800 178 aa4.24□□□□□ -1.73
PRPF3-204ENST00000470824 TNFSF8P32971 234 aa4.24□□□□□ -1.73
PRPF3-204ENST00000470824 HDAC4P56524 1084 aa4.24□□□□□ -1.73
PRPF3-204ENST00000470824 CEBPZQ03701 1054 aaKnown RBP4.24□□□□□ -1.73
PRPF3-204ENST00000470824 EPS8Q12929 822 aa4.24□□□□□ -1.73
PRPF3-204ENST00000470824 OLIG2Q13516 323 aa4.24□□□□□ -1.73
PRPF3-204ENST00000470824 SMTNL2Q2TAL5 461 aa4.24□□□□□ -1.73
PRPF3-204ENST00000470824 PLEKHO1Q53GL0 409 aaPredicted RBP4.24□□□□□ -1.73
PRPF3-204ENST00000470824 PIK3CD-AS1Q5SR53 167 aa4.24□□□□□ -1.73
PRPF3-204ENST00000470824 PLEKHS1Q5SXH7 462 aa4.24□□□□□ -1.73
PRPF3-204ENST00000470824 PAPD7Q5XG87 772 aaKnown RBP4.24□□□□□ -1.73
PRPF3-204ENST00000470824 CES5AQ6NT32 575 aa4.24□□□□□ -1.73
PRPF3-204ENST00000470824 HMBOX1Q6NT76 420 aa4.24□□□□□ -1.73
PRPF3-204ENST00000470824 DEF8Q6ZN54 512 aa4.24□□□□□ -1.73
PRPF3-204ENST00000470824 SZRD1Q7Z422 152 aa4.24□□□□□ -1.73
PRPF3-204ENST00000470824 GALNT5Q7Z7M9 940 aa4.24□□□□□ -1.73
PRPF3-204ENST00000470824 TDRPQ86YL5 185 aa4.24□□□□□ -1.73
PRPF3-204ENST00000470824 TICAM1Q8IUC6 712 aa4.24□□□□□ -1.73
PRPF3-204ENST00000470824 CNGA4Q8IV77 575 aa4.24□□□□□ -1.73
PRPF3-204ENST00000470824 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.24□□□□□ -1.73
PRPF3-204ENST00000470824 DHX40Q8IX18 779 aaKnown RBP4.24□□□□□ -1.73
PRPF3-204ENST00000470824 ADGRF2Q8IZF7 708 aa4.24□□□□□ -1.73
PRPF3-204ENST00000470824 TAGAPQ8N103 731 aa4.24□□□□□ -1.73
PRPF3-204ENST00000470824 ZCCHC9Q8N567 271 aaKnown RBP4.24□□□□□ -1.73
PRPF3-204ENST00000470824 SLC16A11Q8NCK7 471 aa4.24□□□□□ -1.73
PRPF3-204ENST00000470824 MCPH1Q8NEM0 835 aa4.24□□□□□ -1.73
PRPF3-204ENST00000470824 DPF1Q92782 380 aa4.24□□□□□ -1.73
PRPF3-204ENST00000470824 EME1Q96AY2 570 aa4.24□□□□□ -1.73
PRPF3-204ENST00000470824 MMABQ96EY8 250 aaPredicted RBP4.24□□□□□ -1.73
PRPF3-204ENST00000470824 ZC3HAV1LQ96H79 300 aaKnown RBP4.24□□□□□ -1.73
PRPF3-204ENST00000470824 FEM1CQ96JP0 617 aa4.24□□□□□ -1.73
PRPF3-204ENST00000470824 SERINC2Q96SA4 455 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 111.9 ms