RNA–Protein interactions for RNA: ENST00000469802.5

COL9A3-208, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-208ENST00000469802 LY6G6EA0A0G2JKS1 128 aa16.5■□□□□ 0.23
COL9A3-208ENST00000469802 NEMP1O14524 444 aa16.5■□□□□ 0.23
COL9A3-208ENST00000469802 FPGTO14772 594 aa16.5■□□□□ 0.23
COL9A3-208ENST00000469802 FFAR2O15552 330 aa16.5■□□□□ 0.23
COL9A3-208ENST00000469802 PRAMEF11O60813 436 aa16.5■□□□□ 0.23
COL9A3-208ENST00000469802 CSF2P04141 144 aa16.5■□□□□ 0.23
COL9A3-208ENST00000469802 IGFALSP35858 605 aa16.5■□□□□ 0.23
COL9A3-208ENST00000469802 HNRNPKP61978 463 aaKnown RBP eCLIP16.5■□□□□ 0.232e-6■□□□□ 10.9
COL9A3-208ENST00000469802 RAD51Q06609 339 aa16.5■□□□□ 0.23
COL9A3-208ENST00000469802 CYP4F3Q08477 520 aa16.5■□□□□ 0.23
COL9A3-208ENST00000469802 SGCGQ13326 291 aa16.5■□□□□ 0.23
COL9A3-208ENST00000469802 NR1I3Q14994 352 aa16.5■□□□□ 0.23
COL9A3-208ENST00000469802 KDM7AQ6ZMT4 941 aa16.5■□□□□ 0.23
COL9A3-208ENST00000469802 ZNF548Q8NEK5 533 aaPredicted RBP16.5■□□□□ 0.23
COL9A3-208ENST00000469802 NXPE2Q96DL1 559 aa16.5■□□□□ 0.23
COL9A3-208ENST00000469802 EXOC2Q96KP1 924 aa16.5■□□□□ 0.23
COL9A3-208ENST00000469802 KCTD15Q96SI1 283 aaPredicted RBP16.5■□□□□ 0.23
COL9A3-208ENST00000469802 DHX35Q9H5Z1 703 aaKnown RBP16.5■□□□□ 0.23
COL9A3-208ENST00000469802 DNAJC28Q9NX36 388 aa16.5■□□□□ 0.23
COL9A3-208ENST00000469802 DONSONQ9NYP3 566 aa16.5■□□□□ 0.23
COL9A3-208ENST00000469802 UBA2Q9UBT2 640 aaPredicted RBP16.5■□□□□ 0.23
COL9A3-208ENST00000469802 KLF15Q9UIH9 416 aa16.5■□□□□ 0.23
COL9A3-208ENST00000469802 LHX6Q9UPM6 363 aa16.5■□□□□ 0.23
COL9A3-208ENST00000469802 U3KQA8 63 aa16.5■□□□□ 0.23
COL9A3-208ENST00000469802 ASXL3Q9C0F0 2248 aa16.5■□□□□ 0.23
COL9A3-208ENST00000469802 J3KR12 359 aa16.49■□□□□ 0.23
COL9A3-208ENST00000469802 EEF2KO00418 725 aaKnown RBP16.49■□□□□ 0.23
COL9A3-208ENST00000469802 SCAMP1O15126 338 aa16.49■□□□□ 0.23
COL9A3-208ENST00000469802 INSIG1O15503 277 aa16.49■□□□□ 0.23
COL9A3-208ENST00000469802 LRCH4O75427 683 aa16.49■□□□□ 0.23
COL9A3-208ENST00000469802 FTLP02792 175 aaPredicted RBP16.49■□□□□ 0.23
COL9A3-208ENST00000469802 CKMT1AP12532 417 aa16.49■□□□□ 0.23
COL9A3-208ENST00000469802 JUPP14923 745 aa16.49■□□□□ 0.23
COL9A3-208ENST00000469802 TIMP2P16035 220 aa16.49■□□□□ 0.23
COL9A3-208ENST00000469802 MIPP30301 263 aa16.49■□□□□ 0.23
COL9A3-208ENST00000469802 SUOXP51687 545 aa16.49■□□□□ 0.23
COL9A3-208ENST00000469802 INSM1Q01101 510 aaPredicted RBP16.49■□□□□ 0.23
COL9A3-208ENST00000469802 KLHL30Q0D2K2 578 aa16.49■□□□□ 0.23
COL9A3-208ENST00000469802 PDE1CQ14123 709 aaPredicted RBP16.49■□□□□ 0.23
COL9A3-208ENST00000469802 ZNF542PQ5EBM4 170 aa16.49■□□□□ 0.23
COL9A3-208ENST00000469802 ERMARDQ5T6L9 678 aa16.49■□□□□ 0.23
COL9A3-208ENST00000469802 RFX8Q6ZV50 586 aa16.49■□□□□ 0.23
COL9A3-208ENST00000469802 PSTKQ8IV42 348 aaKnown RBP16.49■□□□□ 0.23
COL9A3-208ENST00000469802 ARHGAP12Q8IWW6 846 aa16.49■□□□□ 0.23
COL9A3-208ENST00000469802 NPWQ8N729 165 aa16.49■□□□□ 0.23
COL9A3-208ENST00000469802 DCBLD1Q8N8Z6 715 aa16.49■□□□□ 0.23
COL9A3-208ENST00000469802 FAM181AQ8N9Y4 354 aa16.49■□□□□ 0.23
COL9A3-208ENST00000469802 TP53I13Q8NBR0 393 aaPredicted RBP16.49■□□□□ 0.23
COL9A3-208ENST00000469802 HCAR2Q8TDS4 363 aa16.49■□□□□ 0.23
COL9A3-208ENST00000469802 ZNF653Q96CK0 615 aa16.49■□□□□ 0.23
COL9A3-208ENST00000469802 SCUBE2Q9NQ36 999 aa16.49■□□□□ 0.23
COL9A3-208ENST00000469802 CNOT8Q9UFF9 292 aaKnown RBP16.49■□□□□ 0.23
COL9A3-208ENST00000469802 SCINQ9Y6U3 715 aa16.49■□□□□ 0.23
COL9A3-208ENST00000469802 NEMP2A6NFY4 417 aa16.48■□□□□ 0.23
COL9A3-208ENST00000469802 K7ESM1 405 aa16.48■□□□□ 0.23
COL9A3-208ENST00000469802 PIGNO95427 931 aa16.48■□□□□ 0.23
COL9A3-208ENST00000469802 PBX1P40424 430 aa16.48■□□□□ 0.23
COL9A3-208ENST00000469802 EIF2B5Q13144 721 aaKnown RBP16.48■□□□□ 0.23
COL9A3-208ENST00000469802 TARDBPQ13148 414 aaKnown RBP eCLIP16.48■□□□□ 0.23
COL9A3-208ENST00000469802 GRM3Q14832 879 aa16.48■□□□□ 0.23
COL9A3-208ENST00000469802 RTP5Q14D33 572 aa16.48■□□□□ 0.23
COL9A3-208ENST00000469802 TMEM52BQ4KMG9 183 aa16.48■□□□□ 0.23
COL9A3-208ENST00000469802 HGSNATQ68CP4 663 aa16.48■□□□□ 0.23
COL9A3-208ENST00000469802 TTC7BQ86TV6 843 aa16.48■□□□□ 0.23
COL9A3-208ENST00000469802 TRIM11Q96F44 468 aa16.48■□□□□ 0.23
COL9A3-208ENST00000469802 CELF6Q96J87 481 aaKnown RBP16.48■□□□□ 0.23
COL9A3-208ENST00000469802 APOLD1Q96LR9 279 aa16.48■□□□□ 0.23
COL9A3-208ENST00000469802 DUSP23Q9BVJ7 150 aa16.48■□□□□ 0.23
COL9A3-208ENST00000469802 SLC39A8Q9C0K1 460 aa16.48■□□□□ 0.23
COL9A3-208ENST00000469802 NRSN2Q9GZP1 204 aa16.48■□□□□ 0.23
COL9A3-208ENST00000469802 ISCUQ9H1K1 167 aa16.48■□□□□ 0.23
COL9A3-208ENST00000469802 USP29Q9HBJ7 922 aa16.48■□□□□ 0.23
COL9A3-208ENST00000469802 PCSK1NQ9UHG2 260 aa16.48■□□□□ 0.23
COL9A3-208ENST00000469802 CSNK1G3Q9Y6M4 447 aa16.48■□□□□ 0.23
COL9A3-208ENST00000469802 RP1P56715 2156 aa16.48■□□□□ 0.23
COL9A3-208ENST00000469802 IGSF10Q6WRI0 2623 aa16.47■□□□□ 0.23
COL9A3-208ENST00000469802 A0A087WV48 116 aa16.47■□□□□ 0.23
COL9A3-208ENST00000469802 A0A1W2PQJ5 194 aa16.47■□□□□ 0.23
COL9A3-208ENST00000469802 ARHGAP42A6NI28 874 aa16.47■□□□□ 0.23
COL9A3-208ENST00000469802 H3BM21 787 aa16.47■□□□□ 0.23
COL9A3-208ENST00000469802 PRPSAP2O60256 369 aa16.47■□□□□ 0.23
COL9A3-208ENST00000469802 MMP20O60882 483 aa16.47■□□□□ 0.23
COL9A3-208ENST00000469802 NEBLO76041 1014 aa16.47■□□□□ 0.23
COL9A3-208ENST00000469802 TM7SF2O76062 418 aa16.47■□□□□ 0.23
COL9A3-208ENST00000469802 RNF8O76064 485 aa16.47■□□□□ 0.23
COL9A3-208ENST00000469802 GP1BAP07359 652 aa16.47■□□□□ 0.23
COL9A3-208ENST00000469802 MYBL1P10243 752 aa16.47■□□□□ 0.23
COL9A3-208ENST00000469802 ALPPL2P10696 532 aa16.47■□□□□ 0.23
COL9A3-208ENST00000469802 ERCC2P18074 760 aa16.47■□□□□ 0.23
COL9A3-208ENST00000469802 ITIH2P19823 946 aa16.47■□□□□ 0.23
COL9A3-208ENST00000469802 RGRP47804 291 aa16.47■□□□□ 0.23
COL9A3-208ENST00000469802 CSNK1DP48730 415 aa16.47■□□□□ 0.23
COL9A3-208ENST00000469802 HCAR3P49019 387 aa16.47■□□□□ 0.23
COL9A3-208ENST00000469802 PAPOLAP51003 745 aaKnown RBP16.47■□□□□ 0.23
COL9A3-208ENST00000469802 ZNF135P52742 658 aaPredicted RBP16.47■□□□□ 0.23
COL9A3-208ENST00000469802 YPEL5P62699 121 aa16.47■□□□□ 0.23
COL9A3-208ENST00000469802 DAB2P98082 770 aa16.47■□□□□ 0.23
COL9A3-208ENST00000469802 E2F1Q01094 437 aa16.47■□□□□ 0.23
COL9A3-208ENST00000469802 ELP6Q0PNE2 266 aa16.47■□□□□ 0.23
COL9A3-208ENST00000469802 DPYSQ14117 519 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms