RNA–Protein interactions for RNA: ENST00000469757.1

TRAPPC3-206, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 221 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-206ENST00000469757 UPK3BL2E5RIL1 263 aa8.38□□□□□ -1.07
TRAPPC3-206ENST00000469757 BCAT2O15382 392 aaPredicted RBP8.38□□□□□ -1.07
TRAPPC3-206ENST00000469757 MTSS1O43312 755 aa8.38□□□□□ -1.07
TRAPPC3-206ENST00000469757 TSPAN6O43657 245 aa8.38□□□□□ -1.07
TRAPPC3-206ENST00000469757 CST8O60676 142 aa8.38□□□□□ -1.07
TRAPPC3-206ENST00000469757 GJB3O75712 270 aa8.38□□□□□ -1.07
TRAPPC3-206ENST00000469757 MAP3K6O95382 1288 aa8.38□□□□□ -1.07
TRAPPC3-206ENST00000469757 PIGNO95427 931 aa8.38□□□□□ -1.07
TRAPPC3-206ENST00000469757 FTCDO95954 541 aa8.38□□□□□ -1.07
TRAPPC3-206ENST00000469757 HLA-DQB2P05538 268 aa8.38□□□□□ -1.07
TRAPPC3-206ENST00000469757 CCNB1P14635 433 aa8.38□□□□□ -1.07
TRAPPC3-206ENST00000469757 DNA2P51530 1060 aa8.38□□□□□ -1.07
TRAPPC3-206ENST00000469757 AFF3P51826 1226 aaKnown RBP8.38□□□□□ -1.07
TRAPPC3-206ENST00000469757 RWDD2BP57060 319 aa8.38□□□□□ -1.07
TRAPPC3-206ENST00000469757 RACK1P63244 317 aaKnown RBP8.38□□□□□ -1.07
TRAPPC3-206ENST00000469757 ZBTB17Q13105 803 aa8.38□□□□□ -1.07
TRAPPC3-206ENST00000469757 KLF1Q13351 362 aaPredicted RBP8.38□□□□□ -1.07
TRAPPC3-206ENST00000469757 AGERQ15109 404 aa8.38□□□□□ -1.07
TRAPPC3-206ENST00000469757 DUOXA1Q1HG43 343 aa8.38□□□□□ -1.07
TRAPPC3-206ENST00000469757 ZNF284Q2VY69 593 aa8.38□□□□□ -1.07
TRAPPC3-206ENST00000469757 POM121L1PQ3SYA9 428 aa8.38□□□□□ -1.07
TRAPPC3-206ENST00000469757 SETMARQ53H47 684 aaPredicted RBP8.38□□□□□ -1.07
TRAPPC3-206ENST00000469757 ODF2Q5BJF6 829 aa8.38□□□□□ -1.07
TRAPPC3-206ENST00000469757 TRIM61Q5EBN2 209 aa8.38□□□□□ -1.07
TRAPPC3-206ENST00000469757 ZFYVE27Q5T4F4 411 aa8.38□□□□□ -1.07
TRAPPC3-206ENST00000469757 TCEAL6Q6IPX3 200 aa8.38□□□□□ -1.07
TRAPPC3-206ENST00000469757 NAPEPLDQ6IQ20 393 aa8.38□□□□□ -1.07
TRAPPC3-206ENST00000469757 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.38□□□□□ -1.07
TRAPPC3-206ENST00000469757 BZW1Q7L1Q6 419 aaKnown RBP8.38□□□□□ -1.07
TRAPPC3-206ENST00000469757 SRLQ86TD4 932 aa8.38□□□□□ -1.07
TRAPPC3-206ENST00000469757 IQCHQ86VS3 1027 aa8.38□□□□□ -1.07
TRAPPC3-206ENST00000469757 HORMAD1Q86X24 394 aa8.38□□□□□ -1.07
TRAPPC3-206ENST00000469757 ZSWIM9Q86XI8 627 aa8.38□□□□□ -1.07
TRAPPC3-206ENST00000469757 RFX6Q8HWS3 928 aa8.38□□□□□ -1.07
TRAPPC3-206ENST00000469757 CCDC13Q8IYE1 715 aa8.38□□□□□ -1.07
TRAPPC3-206ENST00000469757 ZCCHC9Q8N567 271 aaKnown RBP8.38□□□□□ -1.07
TRAPPC3-206ENST00000469757 UBL4BQ8N7F7 174 aa8.38□□□□□ -1.07
TRAPPC3-206ENST00000469757 DENND6BQ8NEG7 585 aa8.38□□□□□ -1.07
TRAPPC3-206ENST00000469757 OR14C36Q8NHC7 312 aa8.38□□□□□ -1.07
TRAPPC3-206ENST00000469757 NETO1Q8TDF5 533 aa8.38□□□□□ -1.07
TRAPPC3-206ENST00000469757 GANCQ8TET4 914 aa8.38□□□□□ -1.07
TRAPPC3-206ENST00000469757 NSMCE1Q8WV22 266 aa8.38□□□□□ -1.07
TRAPPC3-206ENST00000469757 ASB12Q8WXK4 309 aa8.38□□□□□ -1.07
TRAPPC3-206ENST00000469757 PIGKQ92643 395 aa8.38□□□□□ -1.07
TRAPPC3-206ENST00000469757 TCEAL3Q969E4 200 aa8.38□□□□□ -1.07
TRAPPC3-206ENST00000469757 TADA1Q96BN2 335 aa8.38□□□□□ -1.07
TRAPPC3-206ENST00000469757 MCCC1Q96RQ3 725 aaPredicted RBP8.38□□□□□ -1.07
TRAPPC3-206ENST00000469757 LGMNQ99538 433 aa8.38□□□□□ -1.07
TRAPPC3-206ENST00000469757 HINFPQ9BQA5 517 aa8.38□□□□□ -1.07
TRAPPC3-206ENST00000469757 ZDHHC5Q9C0B5 715 aa8.38□□□□□ -1.07
TRAPPC3-206ENST00000469757 POLR1EQ9GZS1 481 aaKnown RBP8.38□□□□□ -1.07
TRAPPC3-206ENST00000469757 EBF2Q9HAK2 575 aa8.38□□□□□ -1.07
TRAPPC3-206ENST00000469757 TM9SF3Q9HD45 589 aa8.38□□□□□ -1.07
TRAPPC3-206ENST00000469757 GPR27Q9NS67 375 aa8.38□□□□□ -1.07
TRAPPC3-206ENST00000469757 AMFRQ9UKV5 643 aa8.38□□□□□ -1.07
TRAPPC3-206ENST00000469757 ZFR2Q9UPR6 939 aaKnown RBP8.38□□□□□ -1.07
TRAPPC3-206ENST00000469757 ATP8A1Q9Y2Q0 1164 aa8.38□□□□□ -1.07
TRAPPC3-206ENST00000469757 PPP2R2CQ9Y2T4 447 aa8.38□□□□□ -1.07
TRAPPC3-206ENST00000469757 LAMA1P25391 3075 aa8.38□□□□□ -1.07
TRAPPC3-206ENST00000469757 SPTBN4Q9H254 2564 aa8.38□□□□□ -1.07
TRAPPC3-206ENST00000469757 DNAH14Q0VDD8 3507 aa8.38□□□□□ -1.07
TRAPPC3-206ENST00000469757 A0A1W2PR77 199 aa8.37□□□□□ -1.07
TRAPPC3-206ENST00000469757 CFAP69A5D8W1 941 aa8.37□□□□□ -1.07
TRAPPC3-206ENST00000469757 HACD1B0YJ81 288 aa8.37□□□□□ -1.07
TRAPPC3-206ENST00000469757 PATE3B3GLJ2 98 aa8.37□□□□□ -1.07
TRAPPC3-206ENST00000469757 KHNYNO15037 678 aaKnown RBP8.37□□□□□ -1.07
TRAPPC3-206ENST00000469757 FZD6O60353 706 aa8.37□□□□□ -1.07
TRAPPC3-206ENST00000469757 RNGTTO60942 597 aaKnown RBP8.37□□□□□ -1.07
TRAPPC3-206ENST00000469757 ZNF189O75820 626 aaPredicted RBP8.37□□□□□ -1.07
TRAPPC3-206ENST00000469757 KRT10P13645 584 aa8.37□□□□□ -1.07
TRAPPC3-206ENST00000469757 GNSP15586 552 aa8.37□□□□□ -1.07
TRAPPC3-206ENST00000469757 CES1P23141 567 aa8.37□□□□□ -1.07
TRAPPC3-206ENST00000469757 RPL26P61254 145 aaKnown RBP8.37□□□□□ -1.07
TRAPPC3-206ENST00000469757 DYNLT1P63172 113 aa8.37□□□□□ -1.07
TRAPPC3-206ENST00000469757 RPS21P63220 83 aaKnown RBP8.37□□□□□ -1.07
TRAPPC3-206ENST00000469757 ARHGAP8P85298 464 aa8.37□□□□□ -1.07
TRAPPC3-206ENST00000469757 BNC1Q01954 994 aa8.37□□□□□ -1.07
TRAPPC3-206ENST00000469757 ELP6Q0PNE2 266 aa8.37□□□□□ -1.07
TRAPPC3-206ENST00000469757 OVGP1Q12889 678 aa8.37□□□□□ -1.07
TRAPPC3-206ENST00000469757 TRAF2Q12933 501 aa8.37□□□□□ -1.07
TRAPPC3-206ENST00000469757 XRCC4Q13426 336 aa8.37□□□□□ -1.07
TRAPPC3-206ENST00000469757 GSE1Q14687 1217 aa8.37□□□□□ -1.07
TRAPPC3-206ENST00000469757 NOMO1Q15155 1222 aa8.37□□□□□ -1.07
TRAPPC3-206ENST00000469757 SF3A2Q15428 464 aaKnown RBP8.37□□□□□ -1.07
TRAPPC3-206ENST00000469757 UGP2Q16851 508 aa8.37□□□□□ -1.07
TRAPPC3-206ENST00000469757 SLC45A4Q5BKX6 768 aa8.37□□□□□ -1.07
TRAPPC3-206ENST00000469757 FBXL19Q6PCT2 694 aa8.37□□□□□ -1.07
TRAPPC3-206ENST00000469757 NPNTQ6UXI9 565 aa8.37□□□□□ -1.07
TRAPPC3-206ENST00000469757 CCDC50Q8IVM0 306 aa8.37□□□□□ -1.07
TRAPPC3-206ENST00000469757 RYBPQ8N488 228 aaPredicted RBP8.37□□□□□ -1.07
TRAPPC3-206ENST00000469757 CNTD1Q8N815 330 aa8.37□□□□□ -1.07
TRAPPC3-206ENST00000469757 TRIM58Q8NG06 486 aa8.37□□□□□ -1.07
TRAPPC3-206ENST00000469757 ARRDC2Q8TBH0 407 aa8.37□□□□□ -1.07
TRAPPC3-206ENST00000469757 KLHL32Q96NJ5 620 aa8.37□□□□□ -1.07
TRAPPC3-206ENST00000469757 ALS2CR12Q96Q35 445 aa8.37□□□□□ -1.07
TRAPPC3-206ENST00000469757 EDEM2Q9BV94 578 aa8.37□□□□□ -1.07
TRAPPC3-206ENST00000469757 C1QTNF2Q9BXJ5 285 aa8.37□□□□□ -1.07
TRAPPC3-206ENST00000469757 TDRD1Q9BXT4 1180 aaKnown RBP8.37□□□□□ -1.07
TRAPPC3-206ENST00000469757 MAK16Q9BXY0 300 aaKnown RBP8.37□□□□□ -1.07
TRAPPC3-206ENST00000469757 OSBPL8Q9BZF1 889 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms