RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 H0Y626 953 aa8.36□□□□□ -1.07
BRCA1-208ENST00000468300 PRLP01236 227 aa8.36□□□□□ -1.07
BRCA1-208ENST00000468300 ARNTP27540 789 aa8.36□□□□□ -1.07
BRCA1-208ENST00000468300 OXCT1P55809 520 aa8.36□□□□□ -1.07
BRCA1-208ENST00000468300 GEMIN4P57678 1058 aaKnown RBP8.36□□□□□ -1.07
BRCA1-208ENST00000468300 DLX2Q07687 328 aaPredicted RBP8.36□□□□□ -1.07
BRCA1-208ENST00000468300 GPS2Q13227 327 aa8.36□□□□□ -1.07
BRCA1-208ENST00000468300 MPP2Q14168 576 aa8.36□□□□□ -1.07
BRCA1-208ENST00000468300 CRYMQ14894 314 aa8.36□□□□□ -1.07
BRCA1-208ENST00000468300 FUT11Q495W5 492 aa8.36□□□□□ -1.07
BRCA1-208ENST00000468300 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.36□□□□□ -1.07
BRCA1-208ENST00000468300 TMEM215Q68D42 235 aa8.36□□□□□ -1.07
BRCA1-208ENST00000468300 KDM7AQ6ZMT4 941 aa8.36□□□□□ -1.07
BRCA1-208ENST00000468300 GPR149Q86SP6 731 aa8.36□□□□□ -1.07
BRCA1-208ENST00000468300 CCDC117Q8IWD4 279 aaPredicted RBP8.36□□□□□ -1.07
BRCA1-208ENST00000468300 PALM2Q8IXS6 379 aa8.36□□□□□ -1.07
BRCA1-208ENST00000468300 PLPP6Q8IY26 295 aa8.36□□□□□ -1.07
BRCA1-208ENST00000468300 SLC44A1Q8WWI5 657 aa8.36□□□□□ -1.07
BRCA1-208ENST00000468300 FICDQ9BVA6 458 aa8.36□□□□□ -1.07
BRCA1-208ENST00000468300 KIFC1Q9BW19 673 aa8.36□□□□□ -1.07
BRCA1-208ENST00000468300 NOD2Q9HC29 1040 aa8.36□□□□□ -1.07
BRCA1-208ENST00000468300 SCN8AQ9UQD0 1980 aa8.36□□□□□ -1.07
BRCA1-208ENST00000468300 LINC00854A0A1B0GVQ3 168 aa8.35□□□□□ -1.07
BRCA1-208ENST00000468300 EXOC1LA0A1B0GW35 172 aa8.35□□□□□ -1.07
BRCA1-208ENST00000468300 CBX4O00257 560 aa8.35□□□□□ -1.07
BRCA1-208ENST00000468300 SMAD6O43541 496 aaKnown RBP8.35□□□□□ -1.07
BRCA1-208ENST00000468300 PMPCBO75439 489 aa8.35□□□□□ -1.07
BRCA1-208ENST00000468300 ANXA9O76027 345 aa8.35□□□□□ -1.07
BRCA1-208ENST00000468300 GSTA2P09210 222 aa8.35□□□□□ -1.07
BRCA1-208ENST00000468300 PGAM1P18669 254 aa8.35□□□□□ -1.07
BRCA1-208ENST00000468300 VIPR2P41587 438 aa8.35□□□□□ -1.07
BRCA1-208ENST00000468300 CTSOP43234 321 aaPredicted RBP8.35□□□□□ -1.07
BRCA1-208ENST00000468300 GEMP55040 296 aa8.35□□□□□ -1.07
BRCA1-208ENST00000468300 IRX1P78414 480 aaPredicted RBP8.35□□□□□ -1.07
BRCA1-208ENST00000468300 FRG1Q14331 258 aaKnown RBP8.35□□□□□ -1.07
BRCA1-208ENST00000468300 RFTN1Q14699 578 aaPredicted RBP8.35□□□□□ -1.07
BRCA1-208ENST00000468300 ARHGAP15Q53QZ3 475 aa8.35□□□□□ -1.07
BRCA1-208ENST00000468300 ANKRD54Q6NXT1 300 aa8.35□□□□□ -1.07
BRCA1-208ENST00000468300 EFHBQ8N7U6 833 aa8.35□□□□□ -1.07
BRCA1-208ENST00000468300 TTC16Q8NEE8 873 aa8.35□□□□□ -1.07
BRCA1-208ENST00000468300 ST13P5Q8NFI4 369 aaPredicted RBP8.35□□□□□ -1.07
BRCA1-208ENST00000468300 IPMKQ8NFU5 416 aa8.35□□□□□ -1.07
BRCA1-208ENST00000468300 GSDMBQ8TAX9 411 aa8.35□□□□□ -1.07
BRCA1-208ENST00000468300 DDI1Q8WTU0 396 aa8.35□□□□□ -1.07
BRCA1-208ENST00000468300 MFSD3Q96ES6 412 aa8.35□□□□□ -1.07
BRCA1-208ENST00000468300 ASB16Q96NS5 453 aa8.35□□□□□ -1.07
BRCA1-208ENST00000468300 PAFAH2Q99487 392 aa8.35□□□□□ -1.07
BRCA1-208ENST00000468300 SEMA3CQ99985 751 aa8.35□□□□□ -1.07
BRCA1-208ENST00000468300 SLC39A3Q9BRY0 314 aa8.35□□□□□ -1.07
BRCA1-208ENST00000468300 SPON2Q9BUD6 331 aa8.35□□□□□ -1.07
BRCA1-208ENST00000468300 IGFLR1Q9H665 355 aa8.35□□□□□ -1.07
BRCA1-208ENST00000468300 UBA2Q9UBT2 640 aaPredicted RBP8.35□□□□□ -1.07
BRCA1-208ENST00000468300 DPP7Q9UHL4 492 aa8.35□□□□□ -1.07
BRCA1-208ENST00000468300 FBXO10Q9UK96 956 aa8.35□□□□□ -1.07
BRCA1-208ENST00000468300 MRPS23Q9Y3D9 190 aaKnown RBP8.35□□□□□ -1.07
BRCA1-208ENST00000468300 WNT6Q9Y6F9 365 aa8.35□□□□□ -1.07
BRCA1-208ENST00000468300 A0A1W2PPM1 405 aa8.35□□□□□ -1.07
BRCA1-208ENST00000468300 ZNF197O14709 1029 aa8.35□□□□□ -1.07
BRCA1-208ENST00000468300 TRIM24O15164 1050 aa8.35□□□□□ -1.07
BRCA1-208ENST00000468300 ENPP1P22413 925 aa8.35□□□□□ -1.07
BRCA1-208ENST00000468300 NMBRP28336 390 aa8.35□□□□□ -1.07
BRCA1-208ENST00000468300 LMAN1P49257 510 aa8.35□□□□□ -1.07
BRCA1-208ENST00000468300 MESP2Q0VG99 397 aa8.35□□□□□ -1.07
BRCA1-208ENST00000468300 CDH17Q12864 832 aa8.35□□□□□ -1.07
BRCA1-208ENST00000468300 ADAM15Q13444 863 aa8.35□□□□□ -1.07
BRCA1-208ENST00000468300 SLC1A5Q15758 541 aa8.35□□□□□ -1.07
BRCA1-208ENST00000468300 PREPLQ4J6C6 727 aaPredicted RBP8.35□□□□□ -1.07
BRCA1-208ENST00000468300 SIRPB2Q5JXA9 342 aa8.35□□□□□ -1.07
BRCA1-208ENST00000468300 RARS2Q5T160 578 aaKnown RBP8.35□□□□□ -1.07
BRCA1-208ENST00000468300 KDELC2Q7Z4H8 507 aa8.35□□□□□ -1.07
BRCA1-208ENST00000468300 MFN1Q8IWA4 741 aa8.35□□□□□ -1.07
BRCA1-208ENST00000468300 DCAF4L2Q8NA75 395 aa8.35□□□□□ -1.07
BRCA1-208ENST00000468300 FGF13Q92913 245 aa8.35□□□□□ -1.07
BRCA1-208ENST00000468300 IRF7Q92985 503 aa8.35□□□□□ -1.07
BRCA1-208ENST00000468300 CHFRQ96EP1 664 aa8.35□□□□□ -1.07
BRCA1-208ENST00000468300 APOL5Q9BWW9 433 aa8.35□□□□□ -1.07
BRCA1-208ENST00000468300 KIF9Q9HAQ2 790 aa8.35□□□□□ -1.07
BRCA1-208ENST00000468300 SPHK2Q9NRA0 654 aa8.35□□□□□ -1.07
BRCA1-208ENST00000468300 MARK1Q9P0L2 795 aa8.35□□□□□ -1.07
BRCA1-208ENST00000468300 PRKAG3Q9UGI9 489 aa8.35□□□□□ -1.07
BRCA1-208ENST00000468300 SLC24A2Q9UI40 661 aa8.35□□□□□ -1.07
BRCA1-208ENST00000468300 SOX13Q9UN79 622 aa8.35□□□□□ -1.07
BRCA1-208ENST00000468300 PSAT1Q9Y617 370 aa8.35□□□□□ -1.07
BRCA1-208ENST00000468300 MAD1L1Q9Y6D9 718 aa8.35□□□□□ -1.07
BRCA1-208ENST00000468300 COL4A2P08572 1712 aa8.35□□□□□ -1.07
BRCA1-208ENST00000468300 ZNF106Q9H2Y7 1883 aaKnown RBP8.35□□□□□ -1.07
BRCA1-208ENST00000468300 POC1B-GALNT4F8VUJ3 575 aa8.35□□□□□ -1.07
BRCA1-208ENST00000468300 PSMD3O43242 534 aa8.35□□□□□ -1.07
BRCA1-208ENST00000468300 CDH16O75309 829 aa8.35□□□□□ -1.07
BRCA1-208ENST00000468300 SPAG6O75602 509 aa8.35□□□□□ -1.07
BRCA1-208ENST00000468300 RNASEH2AO75792 299 aaKnown RBP8.35□□□□□ -1.07
BRCA1-208ENST00000468300 USP1O94782 785 aa8.35□□□□□ -1.07
BRCA1-208ENST00000468300 TMCC1O94876 653 aa8.35□□□□□ -1.07
BRCA1-208ENST00000468300 CPP00450 1065 aa8.35□□□□□ -1.07
BRCA1-208ENST00000468300 F7P08709 466 aaPredicted RBP8.35□□□□□ -1.07
BRCA1-208ENST00000468300 ARCN1P48444 511 aaKnown RBP8.35□□□□□ -1.07
BRCA1-208ENST00000468300 NPY2RP49146 381 aa8.35□□□□□ -1.07
BRCA1-208ENST00000468300 PRPSAP1Q14558 356 aa8.35□□□□□ -1.07
BRCA1-208ENST00000468300 SLC14A2Q15849 920 aa8.35□□□□□ -1.07
BRCA1-208ENST00000468300 CTC1Q2NKJ3 1217 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms