RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 ZMPSTE24O75844 475 aa10.28□□□□□ -0.76
MSH5-213ENST00000468136 ATXN1LP0C7T5 689 aaKnown RBP10.28□□□□□ -0.76
MSH5-213ENST00000468136 IRF1P10914 325 aa10.28□□□□□ -0.76
MSH5-213ENST00000468136 TPH1P17752 444 aa10.28□□□□□ -0.76
MSH5-213ENST00000468136 OGNP20774 298 aaKnown RBP10.28□□□□□ -0.76
MSH5-213ENST00000468136 LEPRP48357 1165 aaKnown RBP10.28□□□□□ -0.76
MSH5-213ENST00000468136 ERVFC1P60507 584 aa10.28□□□□□ -0.76
MSH5-213ENST00000468136 PRAMEP78395 509 aa10.28□□□□□ -0.76
MSH5-213ENST00000468136 MSLNQ13421 630 aaPredicted RBP10.28□□□□□ -0.76
MSH5-213ENST00000468136 GRM3Q14832 879 aa10.28□□□□□ -0.76
MSH5-213ENST00000468136 SIRPB2Q5JXA9 342 aa10.28□□□□□ -0.76
MSH5-213ENST00000468136 PLPP4Q5VZY2 271 aa10.28□□□□□ -0.76
MSH5-213ENST00000468136 FSTL4Q6MZW2 842 aa10.28□□□□□ -0.76
MSH5-213ENST00000468136 NEPROQ6NW34 567 aa10.28□□□□□ -0.76
MSH5-213ENST00000468136 SDCCAG8Q86SQ7 713 aaPredicted RBP10.28□□□□□ -0.76
MSH5-213ENST00000468136 ZC3HC1Q86WB0 502 aaKnown RBP10.28□□□□□ -0.76
MSH5-213ENST00000468136 CIR1Q86X95 450 aaPredicted RBP10.28□□□□□ -0.76
MSH5-213ENST00000468136 MFN1Q8IWA4 741 aa10.28□□□□□ -0.76
MSH5-213ENST00000468136 KIRREL3Q8IZU9 778 aa10.28□□□□□ -0.76
MSH5-213ENST00000468136 PGBD5Q8N414 524 aa10.28□□□□□ -0.76
MSH5-213ENST00000468136 OTUD6BQ8N6M0 293 aa10.28□□□□□ -0.76
MSH5-213ENST00000468136 MAB21L3Q8N8X9 362 aa10.28□□□□□ -0.76
MSH5-213ENST00000468136 MICAL1Q8TDZ2 1067 aa10.28□□□□□ -0.76
MSH5-213ENST00000468136 ADAMTS19Q8TE59 1207 aa10.28□□□□□ -0.76
MSH5-213ENST00000468136 ISG20Q96AZ6 181 aaKnown RBP10.28□□□□□ -0.76
MSH5-213ENST00000468136 ZNF419Q96HQ0 510 aaPredicted RBP10.28□□□□□ -0.76
MSH5-213ENST00000468136 VPS39Q96JC1 886 aa10.28□□□□□ -0.76
MSH5-213ENST00000468136 C7orf26Q96N11 449 aa10.28□□□□□ -0.76
MSH5-213ENST00000468136 FAM111AQ96PZ2 611 aa10.28□□□□□ -0.76
MSH5-213ENST00000468136 TCF12Q99081 682 aa10.28□□□□□ -0.76
MSH5-213ENST00000468136 CDCA3Q99618 268 aaPredicted RBP10.28□□□□□ -0.76
MSH5-213ENST00000468136 ELAC2Q9BQ52 826 aaKnown RBP10.28□□□□□ -0.76
MSH5-213ENST00000468136 CORO1BQ9BR76 489 aa10.28□□□□□ -0.76
MSH5-213ENST00000468136 SLC2A11Q9BYW1 496 aa10.28□□□□□ -0.76
MSH5-213ENST00000468136 IARS2Q9NSE4 1012 aaKnown RBP10.28□□□□□ -0.76
MSH5-213ENST00000468136 PCMTD2Q9NV79 361 aa10.28□□□□□ -0.76
MSH5-213ENST00000468136 FGFR1OP2Q9NVK5 253 aa10.28□□□□□ -0.76
MSH5-213ENST00000468136 SMPD4Q9NXE4 827 aa10.28□□□□□ -0.76
MSH5-213ENST00000468136 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.28□□□□□ -0.76
MSH5-213ENST00000468136 CFAP97Q9P2B7 532 aa10.28□□□□□ -0.76
MSH5-213ENST00000468136 VPS28Q9UK41 221 aa10.28□□□□□ -0.76
MSH5-213ENST00000468136 PHTF1Q9UMS5 762 aa10.28□□□□□ -0.76
MSH5-213ENST00000468136 OR51B4Q9Y5P0 310 aa10.28□□□□□ -0.76
MSH5-213ENST00000468136 USH1CQ9Y6N9 552 aa10.28□□□□□ -0.76
MSH5-213ENST00000468136 ANAPC1Q9H1A4 1944 aa10.28□□□□□ -0.76
MSH5-213ENST00000468136 KIAA1671Q9BY89 1806 aa10.28□□□□□ -0.76
MSH5-213ENST00000468136 NYNRINQ9P2P1 1898 aaKnown RBP10.27□□□□□ -0.76
MSH5-213ENST00000468136 A0A1W2PRU2 124 aa10.27□□□□□ -0.77
MSH5-213ENST00000468136 CCT8L1PA6NM43 557 aa10.27□□□□□ -0.77
MSH5-213ENST00000468136 GOLGA8RI6L899 631 aa10.27□□□□□ -0.77
MSH5-213ENST00000468136 CBX4O00257 560 aa10.27□□□□□ -0.77
MSH5-213ENST00000468136 TPP1O14773 563 aa10.27□□□□□ -0.77
MSH5-213ENST00000468136 UGT1A9O60656 530 aa10.27□□□□□ -0.77
MSH5-213ENST00000468136 SOCS5O75159 536 aa10.27□□□□□ -0.77
MSH5-213ENST00000468136 DCTN3O75935 186 aa10.27□□□□□ -0.77
MSH5-213ENST00000468136 ATP5HO75947 161 aa10.27□□□□□ -0.77
MSH5-213ENST00000468136 VAPBO95292 243 aa10.27□□□□□ -0.77
MSH5-213ENST00000468136 ALDOAP04075 364 aaKnown RBP10.27□□□□□ -0.77
MSH5-213ENST00000468136 BPGMP07738 259 aa10.27□□□□□ -0.77
MSH5-213ENST00000468136 MYL4P12829 197 aa10.27□□□□□ -0.77
MSH5-213ENST00000468136 NFKBIAP25963 317 aa10.27□□□□□ -0.77
MSH5-213ENST00000468136 FOXN2P32314 431 aa10.27□□□□□ -0.77
MSH5-213ENST00000468136 VASPP50552 380 aaPredicted RBP10.27□□□□□ -0.77
MSH5-213ENST00000468136 HK2P52789 917 aa10.27□□□□□ -0.77
MSH5-213ENST00000468136 SLC12A2P55011 1212 aa10.27□□□□□ -0.77
MSH5-213ENST00000468136 MAXP61244 160 aa10.27□□□□□ -0.77
MSH5-213ENST00000468136 ERVK-21P61565 698 aa10.27□□□□□ -0.77
MSH5-213ENST00000468136 PDE1CQ14123 709 aaPredicted RBP10.27□□□□□ -0.77
MSH5-213ENST00000468136 SEPT6Q14141 434 aa10.27□□□□□ -0.77
MSH5-213ENST00000468136 SETDB1Q15047 1291 aa10.27□□□□□ -0.77
MSH5-213ENST00000468136 CYTH1Q15438 398 aa10.27□□□□□ -0.77
MSH5-213ENST00000468136 TAF1AQ15573 450 aaPredicted RBP10.27□□□□□ -0.77
MSH5-213ENST00000468136 CNGA3Q16281 694 aa10.27□□□□□ -0.77
MSH5-213ENST00000468136 PCSK7Q16549 785 aa10.27□□□□□ -0.77
MSH5-213ENST00000468136 GPR158Q5T848 1215 aa10.27□□□□□ -0.77
MSH5-213ENST00000468136 RNF187Q5TA31 235 aaPredicted RBP10.27□□□□□ -0.77
MSH5-213ENST00000468136 ESRP1Q6NXG1 681 aaKnown RBP10.27□□□□□ -0.77
MSH5-213ENST00000468136 NUDCD3Q8IVD9 361 aa10.27□□□□□ -0.77
MSH5-213ENST00000468136 PLPP6Q8IY26 295 aa10.27□□□□□ -0.77
MSH5-213ENST00000468136 CMTM8Q8IZV2 173 aa10.27□□□□□ -0.77
MSH5-213ENST00000468136 CARNMT1Q8N4J0 409 aa10.27□□□□□ -0.77
MSH5-213ENST00000468136 DCLK2Q8N568 766 aa10.27□□□□□ -0.77
MSH5-213ENST00000468136 DDI1Q8WTU0 396 aa10.27□□□□□ -0.77
MSH5-213ENST00000468136 SLC22A17Q8WUG5 538 aa10.27□□□□□ -0.77
MSH5-213ENST00000468136 PPP2R3CQ969Q6 453 aa10.27□□□□□ -0.77
MSH5-213ENST00000468136 E2F7Q96AV8 911 aa10.27□□□□□ -0.77
MSH5-213ENST00000468136 MYEOVQ96EZ4 313 aa10.27□□□□□ -0.77
MSH5-213ENST00000468136 TRIB3Q96RU7 358 aa10.27□□□□□ -0.77
MSH5-213ENST00000468136 TUBB6Q9BUF5 446 aa10.27□□□□□ -0.77
MSH5-213ENST00000468136 TSSK1BQ9BXA7 367 aa10.27□□□□□ -0.77
MSH5-213ENST00000468136 TDRD1Q9BXT4 1180 aaKnown RBP10.27□□□□□ -0.77
MSH5-213ENST00000468136 TRIM55Q9BYV6 548 aa10.27□□□□□ -0.77
MSH5-213ENST00000468136 SLC13A1Q9BZW2 595 aa10.27□□□□□ -0.77
MSH5-213ENST00000468136 CEP44Q9C0F1 390 aa10.27□□□□□ -0.77
MSH5-213ENST00000468136 STN1Q9H668 368 aaKnown RBP10.27□□□□□ -0.77
MSH5-213ENST00000468136 UGT1A7Q9HAW7 530 aa10.27□□□□□ -0.77
MSH5-213ENST00000468136 UGT1A10Q9HAW8 530 aa10.27□□□□□ -0.77
MSH5-213ENST00000468136 UGT1A8Q9HAW9 530 aa10.27□□□□□ -0.77
MSH5-213ENST00000468136 MAN1C1Q9NR34 630 aa10.27□□□□□ -0.77
MSH5-213ENST00000468136 SNX15Q9NRS6 342 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms