RNA–Protein interactions for RNA: ENST00000467847.1

TRIM56-203, Transcript of tripartite motif containing 56, humanhuman

TSL 2

Gene TRIM56, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-203ENST00000467847 RFC1P35251 1148 aaPredicted RBP17.49■□□□□ 0.39
TRIM56-203ENST00000467847 IGFALSP35858 605 aa17.49■□□□□ 0.39
TRIM56-203ENST00000467847 NSFP46459 744 aaKnown RBP17.49■□□□□ 0.39
TRIM56-203ENST00000467847 JAM2P57087 298 aa17.49■□□□□ 0.39
TRIM56-203ENST00000467847 TMPRSS3P57727 454 aa17.49■□□□□ 0.39
TRIM56-203ENST00000467847 RAD51Q06609 339 aa17.49■□□□□ 0.39
TRIM56-203ENST00000467847 PRRT3Q5FWE3 981 aa17.49■□□□□ 0.39
TRIM56-203ENST00000467847 FKBP15Q5T1M5 1219 aa17.49■□□□□ 0.39
TRIM56-203ENST00000467847 PHACTR4Q8IZ21 702 aa17.49■□□□□ 0.39
TRIM56-203ENST00000467847 CXorf40AQ8TE69 158 aa17.49■□□□□ 0.39
TRIM56-203ENST00000467847 KCNE4Q8WWG9 221 aa17.49■□□□□ 0.39
TRIM56-203ENST00000467847 GLMNQ92990 594 aa17.49■□□□□ 0.39
TRIM56-203ENST00000467847 NTAN1Q96AB6 310 aa17.49■□□□□ 0.39
TRIM56-203ENST00000467847 SLC13A1Q9BZW2 595 aa17.49■□□□□ 0.39
TRIM56-203ENST00000467847 TCEAL2Q9H3H9 227 aaPredicted RBP17.49■□□□□ 0.39
TRIM56-203ENST00000467847 THSD1Q9NS62 852 aa17.49■□□□□ 0.39
TRIM56-203ENST00000467847 CHMP5Q9NZZ3 219 aa17.49■□□□□ 0.39
TRIM56-203ENST00000467847 ADAM22Q9P0K1 906 aa17.49■□□□□ 0.39
TRIM56-203ENST00000467847 SATB2Q9UPW6 733 aa17.49■□□□□ 0.39
TRIM56-203ENST00000467847 KIF26BQ2KJY2 2108 aa17.48■□□□□ 0.39
TRIM56-203ENST00000467847 EME2A4GXA9 379 aaPredicted RBP17.48■□□□□ 0.39
TRIM56-203ENST00000467847 MUSKO15146 869 aa17.48■□□□□ 0.39
TRIM56-203ENST00000467847 EPHB6O15197 1021 aa17.48■□□□□ 0.39
TRIM56-203ENST00000467847 GCATO75600 419 aa17.48■□□□□ 0.39
TRIM56-203ENST00000467847 TM7SF2O76062 418 aa17.48■□□□□ 0.39
TRIM56-203ENST00000467847 IGSF6O95976 241 aa17.48■□□□□ 0.39
TRIM56-203ENST00000467847 GPD1P21695 349 aa17.48■□□□□ 0.39
TRIM56-203ENST00000467847 STAT1P42224 750 aa17.48■□□□□ 0.39
TRIM56-203ENST00000467847 RPIAP49247 311 aa17.48■□□□□ 0.39
TRIM56-203ENST00000467847 UCNP55089 124 aa17.48■□□□□ 0.39
TRIM56-203ENST00000467847 ADKP55263 362 aaKnown RBP17.48■□□□□ 0.39
TRIM56-203ENST00000467847 RHOAP61586 193 aa17.48■□□□□ 0.39
TRIM56-203ENST00000467847 YPEL5P62699 121 aa17.48■□□□□ 0.39
TRIM56-203ENST00000467847 PTP4A2Q12974 167 aa17.48■□□□□ 0.39
TRIM56-203ENST00000467847 C1orf61Q13536 156 aa17.48■□□□□ 0.39
TRIM56-203ENST00000467847 KRT31Q15323 416 aa17.48■□□□□ 0.39
TRIM56-203ENST00000467847 TAF1BQ53T94 588 aaPredicted RBP17.48■□□□□ 0.39
TRIM56-203ENST00000467847 C3orf38Q5JPI3 329 aa17.48■□□□□ 0.39
TRIM56-203ENST00000467847 CRTC1Q6UUV9 634 aa17.48■□□□□ 0.39
TRIM56-203ENST00000467847 RBM44Q6ZP01 1051 aaKnown RBP17.48■□□□□ 0.39
TRIM56-203ENST00000467847 SLFN11Q7Z7L1 901 aa17.48■□□□□ 0.39
TRIM56-203ENST00000467847 PYROXD2Q8N2H3 581 aa17.48■□□□□ 0.39
TRIM56-203ENST00000467847 RTL3Q8N8U3 475 aaKnown RBP17.48■□□□□ 0.39
TRIM56-203ENST00000467847 TPCN2Q8NHX9 752 aa17.48■□□□□ 0.39
TRIM56-203ENST00000467847 CASKIN2Q8WXE0 1202 aa17.48■□□□□ 0.39
TRIM56-203ENST00000467847 ATXN7L3BQ96GX2 97 aa17.48■□□□□ 0.39
TRIM56-203ENST00000467847 EPAS1Q99814 870 aa17.48■□□□□ 0.39
TRIM56-203ENST00000467847 WRAP53Q9BUR4 548 aaKnown RBP17.48■□□□□ 0.39
TRIM56-203ENST00000467847 LRRC61Q9BV99 259 aa17.48■□□□□ 0.39
TRIM56-203ENST00000467847 SELENOOQ9BVL4 669 aa17.48■□□□□ 0.39
TRIM56-203ENST00000467847 BOCQ9BWV1 1114 aa17.48■□□□□ 0.39
TRIM56-203ENST00000467847 TTYH3Q9C0H2 523 aa17.48■□□□□ 0.39
TRIM56-203ENST00000467847 ASCL3Q9NQ33 180 aa17.48■□□□□ 0.39
TRIM56-203ENST00000467847 LRRK1Q38SD2 2015 aa17.48■□□□□ 0.39
TRIM56-203ENST00000467847 KLK10O43240 276 aa17.47■□□□□ 0.39
TRIM56-203ENST00000467847 CALB1P05937 261 aa17.47■□□□□ 0.39
TRIM56-203ENST00000467847 ANXA6P08133 673 aa17.47■□□□□ 0.39
TRIM56-203ENST00000467847 UNGP13051 313 aaPredicted RBP17.47■□□□□ 0.39
TRIM56-203ENST00000467847 EPHB2P29323 1055 aa17.47■□□□□ 0.39
TRIM56-203ENST00000467847 RBMS1P29558 406 aaKnown RBP17.47■□□□□ 0.39
TRIM56-203ENST00000467847 KLHL40Q2TBA0 621 aa17.47■□□□□ 0.39
TRIM56-203ENST00000467847 EFHC2Q5JST6 749 aa17.47■□□□□ 0.39
TRIM56-203ENST00000467847 PERM1Q5SV97 790 aa17.47■□□□□ 0.39
TRIM56-203ENST00000467847 C6orf132Q5T0Z8 1188 aa17.47■□□□□ 0.39
TRIM56-203ENST00000467847 FAXCQ5TGI0 409 aa17.47■□□□□ 0.39
TRIM56-203ENST00000467847 CDKAL1Q5VV42 579 aa17.47■□□□□ 0.39
TRIM56-203ENST00000467847 MACC1Q6ZN28 852 aa17.47■□□□□ 0.39
TRIM56-203ENST00000467847 NETO2Q8NC67 525 aa17.47■□□□□ 0.39
TRIM56-203ENST00000467847 ENOX1Q8TC92 643 aaKnown RBP17.47■□□□□ 0.39
TRIM56-203ENST00000467847 GRAMD1AQ96CP6 724 aa17.47■□□□□ 0.39
TRIM56-203ENST00000467847 VCPIP1Q96JH7 1222 aa17.47■□□□□ 0.39
TRIM56-203ENST00000467847 TBATAQ96M53 351 aa17.47■□□□□ 0.39
TRIM56-203ENST00000467847 PCDHB18PQ96TA0 734 aa17.47■□□□□ 0.39
TRIM56-203ENST00000467847 KLC2Q9H0B6 622 aa17.47■□□□□ 0.39
TRIM56-203ENST00000467847 NOL6Q9H6R4 1146 aaKnown RBP17.47■□□□□ 0.39
TRIM56-203ENST00000467847 CPNE5Q9HCH3 593 aa17.47■□□□□ 0.39
TRIM56-203ENST00000467847 MBNL1Q9NR56 388 aaKnown RBP17.47■□□□□ 0.39
TRIM56-203ENST00000467847 PNMA8BQ9ULN7 279 aaPredicted RBP17.47■□□□□ 0.39
TRIM56-203ENST00000467847 DAAM1Q9Y4D1 1078 aa17.47■□□□□ 0.39
TRIM56-203ENST00000467847 ENTPD2Q9Y5L3 495 aa17.47■□□□□ 0.39
TRIM56-203ENST00000467847 LMO7DNF2Z398 122 aa17.46■□□□□ 0.39
TRIM56-203ENST00000467847 TOR1BO14657 336 aa17.46■□□□□ 0.39
TRIM56-203ENST00000467847 TCEA3O75764 348 aa17.46■□□□□ 0.39
TRIM56-203ENST00000467847 TIMP2P16035 220 aa17.46■□□□□ 0.39
TRIM56-203ENST00000467847 ITIH2P19823 946 aa17.46■□□□□ 0.39
TRIM56-203ENST00000467847 XPAP23025 273 aaPredicted RBP17.46■□□□□ 0.39
TRIM56-203ENST00000467847 EIF4A3P38919 411 aaKnown RBP17.46■□□□□ 0.39
TRIM56-203ENST00000467847 GSCP56915 257 aaPredicted RBP17.46■□□□□ 0.39
TRIM56-203ENST00000467847 PPARDQ03181 441 aa17.46■□□□□ 0.39
TRIM56-203ENST00000467847 CLEC16AQ2KHT3 1053 aa17.46■□□□□ 0.39
TRIM56-203ENST00000467847 INO80DQ53TQ3 878 aaPredicted RBP17.46■□□□□ 0.39
TRIM56-203ENST00000467847 ARHGAP40Q5TG30 622 aa17.46■□□□□ 0.39
TRIM56-203ENST00000467847 SCYL2Q6P3W7 929 aa17.46■□□□□ 0.39
TRIM56-203ENST00000467847 WDR59Q6PJI9 974 aa17.46■□□□□ 0.39
TRIM56-203ENST00000467847 IGF2-ASQ6U949 168 aa17.46■□□□□ 0.39
TRIM56-203ENST00000467847 PHF13Q86YI8 300 aaPredicted RBP17.46■□□□□ 0.39
TRIM56-203ENST00000467847 SLC35F3Q8IY50 421 aa17.46■□□□□ 0.39
TRIM56-203ENST00000467847 TP53I13Q8NBR0 393 aaPredicted RBP17.46■□□□□ 0.39
TRIM56-203ENST00000467847 C3orf20Q8ND61 904 aa17.46■□□□□ 0.39
TRIM56-203ENST00000467847 NAT6Q93015 286 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms