RNA–Protein interactions for RNA: ENST00000467681.5

SSBP1-206, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 630 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-206ENST00000467681 ORAI3Q9BRQ5 295 aa13.77□□□□□ -0.21
SSBP1-206ENST00000467681 HERPUD2Q9BSE4 406 aa13.77□□□□□ -0.21
SSBP1-206ENST00000467681 NOD2Q9HC29 1040 aa13.77□□□□□ -0.21
SSBP1-206ENST00000467681 PREBQ9HCU5 417 aa13.77□□□□□ -0.21
SSBP1-206ENST00000467681 SEMA4GQ9NTN9 838 aa13.77□□□□□ -0.21
SSBP1-206ENST00000467681 EIF2B4Q9UI10 523 aaKnown RBP13.77□□□□□ -0.21
SSBP1-206ENST00000467681 PACSIN2Q9UNF0 486 aaPredicted RBP13.77□□□□□ -0.21
SSBP1-206ENST00000467681 FADS3Q9Y5Q0 445 aa13.77□□□□□ -0.21
SSBP1-206ENST00000467681 TRPM6Q9BX84 2022 aa13.76□□□□□ -0.21
SSBP1-206ENST00000467681 NYNRINQ9P2P1 1898 aaKnown RBP13.76□□□□□ -0.21
SSBP1-206ENST00000467681 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.76□□□□□ -0.21
SSBP1-206ENST00000467681 TSPAN11A1L157 253 aa13.76□□□□□ -0.21
SSBP1-206ENST00000467681 TTC24A2A3L6 582 aaPredicted RBP13.76□□□□□ -0.21
SSBP1-206ENST00000467681 PPP1R12AO14974 1030 aaPredicted RBP13.76□□□□□ -0.21
SSBP1-206ENST00000467681 AREL1O15033 823 aa13.76□□□□□ -0.21
SSBP1-206ENST00000467681 LATO43561 262 aa13.76□□□□□ -0.21
SSBP1-206ENST00000467681 AP1G1O43747 822 aa13.76□□□□□ -0.21
SSBP1-206ENST00000467681 GJB3O75712 270 aa13.76□□□□□ -0.21
SSBP1-206ENST00000467681 PIGNO95427 931 aa13.76□□□□□ -0.21
SSBP1-206ENST00000467681 PECAM1P16284 738 aaPredicted RBP13.76□□□□□ -0.21
SSBP1-206ENST00000467681 SUOXP51687 545 aa13.76□□□□□ -0.21
SSBP1-206ENST00000467681 IFI35P80217 286 aaPredicted RBP13.76□□□□□ -0.21
SSBP1-206ENST00000467681 BCL2L1Q07817 233 aa13.76□□□□□ -0.21
SSBP1-206ENST00000467681 AP1B1Q10567 949 aa13.76□□□□□ -0.21
SSBP1-206ENST00000467681 RPS6KA1Q15418 735 aa13.76□□□□□ -0.21
SSBP1-206ENST00000467681 CCDC6Q16204 474 aa13.76□□□□□ -0.21
SSBP1-206ENST00000467681 DUOXA1Q1HG43 343 aa13.76□□□□□ -0.21
SSBP1-206ENST00000467681 AADACL2Q6P093 401 aa13.76□□□□□ -0.21
SSBP1-206ENST00000467681 TRIM69Q86WT6 500 aa13.76□□□□□ -0.21
SSBP1-206ENST00000467681 REXO1L1PQ8IX06 675 aa13.76□□□□□ -0.21
SSBP1-206ENST00000467681 CEP76Q8TAP6 659 aa13.76□□□□□ -0.21
SSBP1-206ENST00000467681 FEM1CQ96JP0 617 aa13.76□□□□□ -0.21
SSBP1-206ENST00000467681 IL12RB2Q99665 862 aa13.76□□□□□ -0.21
SSBP1-206ENST00000467681 ATP13A3Q9H7F0 1226 aa13.76□□□□□ -0.21
SSBP1-206ENST00000467681 NT5MQ9NPB1 228 aa13.76□□□□□ -0.21
SSBP1-206ENST00000467681 SCUBE2Q9NQ36 999 aa13.76□□□□□ -0.21
SSBP1-206ENST00000467681 ATP8A1Q9Y2Q0 1164 aa13.76□□□□□ -0.21
SSBP1-206ENST00000467681 CEP250Q9BV73 2442 aa13.75□□□□□ -0.21
SSBP1-206ENST00000467681 SHROOM3Q8TF72 1996 aa13.75□□□□□ -0.21
SSBP1-206ENST00000467681 CEP192Q8TEP8 1941 aa13.75□□□□□ -0.21
SSBP1-206ENST00000467681 A0A1W2PPC4 97 aa13.75□□□□□ -0.21
SSBP1-206ENST00000467681 APOC4-APOC2K7ER74 178 aa13.75□□□□□ -0.21
SSBP1-206ENST00000467681 KCNK1O00180 336 aa13.75□□□□□ -0.21
SSBP1-206ENST00000467681 TRAFD1O14545 582 aaPredicted RBP13.75□□□□□ -0.21
SSBP1-206ENST00000467681 KHNYNO15037 678 aaKnown RBP13.75□□□□□ -0.21
SSBP1-206ENST00000467681 BCAT2O15382 392 aaPredicted RBP13.75□□□□□ -0.21
SSBP1-206ENST00000467681 ZSCAN12O43309 604 aa13.75□□□□□ -0.21
SSBP1-206ENST00000467681 HTRA2O43464 458 aaPredicted RBP13.75□□□□□ -0.21
SSBP1-206ENST00000467681 TSPAN6O43657 245 aa13.75□□□□□ -0.21
SSBP1-206ENST00000467681 FOXD2O60548 495 aaPredicted RBP13.75□□□□□ -0.21
SSBP1-206ENST00000467681 RNGTTO60942 597 aaKnown RBP13.75□□□□□ -0.21
SSBP1-206ENST00000467681 TJP3O95049 919 aa13.75□□□□□ -0.21
SSBP1-206ENST00000467681 PCDH8O95206 1070 aa13.75□□□□□ -0.21
SSBP1-206ENST00000467681 APOC2P02655 101 aa13.75□□□□□ -0.21
SSBP1-206ENST00000467681 GNSP15586 552 aa13.75□□□□□ -0.21
SSBP1-206ENST00000467681 SERPINA4P29622 427 aa13.75□□□□□ -0.21
SSBP1-206ENST00000467681 NUDT1P36639 197 aa13.75□□□□□ -0.21
SSBP1-206ENST00000467681 ABL2P42684 1182 aa13.75□□□□□ -0.21
SSBP1-206ENST00000467681 MAXP61244 160 aa13.75□□□□□ -0.21
SSBP1-206ENST00000467681 IRX4P78413 519 aa13.75□□□□□ -0.21
SSBP1-206ENST00000467681 ZNF211Q13398 564 aaPredicted RBP13.75□□□□□ -0.21
SSBP1-206ENST00000467681 XRCC4Q13426 336 aa13.75□□□□□ -0.21
SSBP1-206ENST00000467681 PRKD1Q15139 912 aaPredicted RBP13.75□□□□□ -0.21
SSBP1-206ENST00000467681 UGP2Q16851 508 aa13.75□□□□□ -0.21
SSBP1-206ENST00000467681 MEI1Q5TIA1 1274 aa13.75□□□□□ -0.21
SSBP1-206ENST00000467681 ALG1LQ6GMV1 187 aa13.75□□□□□ -0.21
SSBP1-206ENST00000467681 SLC23A3Q6PIS1 610 aa13.75□□□□□ -0.21
SSBP1-206ENST00000467681 BRAT1Q6PJG6 821 aa13.75□□□□□ -0.21
SSBP1-206ENST00000467681 RABEPKQ7Z6M1 372 aa13.75□□□□□ -0.21
SSBP1-206ENST00000467681 PRPF39Q86UA1 669 aaKnown RBP13.75□□□□□ -0.21
SSBP1-206ENST00000467681 HORMAD1Q86X24 394 aa13.75□□□□□ -0.21
SSBP1-206ENST00000467681 CNTD1Q8N815 330 aa13.75□□□□□ -0.21
SSBP1-206ENST00000467681 ARRDC2Q8TBH0 407 aa13.75□□□□□ -0.21
SSBP1-206ENST00000467681 TFB1MQ8WVM0 346 aaKnown RBP13.75□□□□□ -0.21
SSBP1-206ENST00000467681 SPOCK2Q92563 424 aa13.75□□□□□ -0.21
SSBP1-206ENST00000467681 ECHDC3Q96DC8 303 aa13.75□□□□□ -0.21
SSBP1-206ENST00000467681 ALS2CR12Q96Q35 445 aa13.75□□□□□ -0.21
SSBP1-206ENST00000467681 SEMA3CQ99985 751 aa13.75□□□□□ -0.21
SSBP1-206ENST00000467681 MIR1-1HGQ9H1L0 117 aa13.75□□□□□ -0.21
SSBP1-206ENST00000467681 SMOC1Q9H4F8 434 aa13.75□□□□□ -0.21
SSBP1-206ENST00000467681 EBF2Q9HAK2 575 aa13.75□□□□□ -0.21
SSBP1-206ENST00000467681 HAUS2Q9NVX0 235 aa13.75□□□□□ -0.21
SSBP1-206ENST00000467681 SUSD2Q9UGT4 822 aa13.75□□□□□ -0.21
SSBP1-206ENST00000467681 SLC6A14Q9UN76 642 aa13.75□□□□□ -0.21
SSBP1-206ENST00000467681 PCDHGC4Q9Y5F7 938 aa13.75□□□□□ -0.21
SSBP1-206ENST00000467681 DOCK9Q9BZ29 2069 aa13.75□□□□□ -0.21
SSBP1-206ENST00000467681 A0A1B0GTW7 788 aa13.74□□□□□ -0.21
SSBP1-206ENST00000467681 A0A1W2PQU0 124 aa13.74□□□□□ -0.21
SSBP1-206ENST00000467681 HACD1B0YJ81 288 aa13.74□□□□□ -0.21
SSBP1-206ENST00000467681 PRR5-ARHGAP8B1AHC4 643 aa13.74□□□□□ -0.21
SSBP1-206ENST00000467681 PATE3B3GLJ2 98 aa13.74□□□□□ -0.21
SSBP1-206ENST00000467681 MTSS1O43312 755 aa13.74□□□□□ -0.21
SSBP1-206ENST00000467681 SERPINF2P08697 491 aa13.74□□□□□ -0.21
SSBP1-206ENST00000467681 PPP2CBP62714 309 aa13.74□□□□□ -0.21
SSBP1-206ENST00000467681 POLR2LP62875 67 aaKnown RBP13.74□□□□□ -0.21
SSBP1-206ENST00000467681 PPP2CAP67775 309 aa13.74□□□□□ -0.21
SSBP1-206ENST00000467681 ITKQ08881 620 aa13.74□□□□□ -0.21
SSBP1-206ENST00000467681 NIPAL4Q0D2K0 466 aa13.74□□□□□ -0.21
SSBP1-206ENST00000467681 IHHQ14623 411 aa13.74□□□□□ -0.21
SSBP1-206ENST00000467681 SF3A2Q15428 464 aaKnown RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms