RNA–Protein interactions for RNA: ENST00000467468.5

SMC4-208, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-208ENST00000467468 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.39□□□□□ -1.716e-65■■■■■ 143.5
SMC4-208ENST00000467468 GHDCQ8N2G8 530 aa4.39□□□□□ -1.71
SMC4-208ENST00000467468 OR52N4Q8NGI2 321 aa4.39□□□□□ -1.71
SMC4-208ENST00000467468 BCAS4Q8TDM0 211 aa4.39□□□□□ -1.71
SMC4-208ENST00000467468 CELF1Q92879 486 aaKnown RBP4.39□□□□□ -1.71
SMC4-208ENST00000467468 COQ8BQ96D53 544 aa4.39□□□□□ -1.71
SMC4-208ENST00000467468 P2RY11Q96G91 374 aa4.39□□□□□ -1.71
SMC4-208ENST00000467468 GATA5Q9BWX5 397 aaPredicted RBP4.39□□□□□ -1.71
SMC4-208ENST00000467468 HEMGNQ9BXL5 484 aa4.39□□□□□ -1.71
SMC4-208ENST00000467468 MAK16Q9BXY0 300 aaKnown RBP4.39□□□□□ -1.71
SMC4-208ENST00000467468 SMARCAD1Q9H4L7 1026 aa4.39□□□□□ -1.71
SMC4-208ENST00000467468 KAT14Q9H8E8 782 aa4.39□□□□□ -1.71
SMC4-208ENST00000467468 ENTPD7Q9NQZ7 604 aa4.39□□□□□ -1.71
SMC4-208ENST00000467468 FBXO40Q9UH90 709 aa4.39□□□□□ -1.71
SMC4-208ENST00000467468 INTS6Q9UL03 887 aaKnown RBP4.39□□□□□ -1.71
SMC4-208ENST00000467468 ZNF711Q9Y462 761 aa4.39□□□□□ -1.71
SMC4-208ENST00000467468 ZMYM2Q9UBW7 1377 aa4.39□□□□□ -1.71
SMC4-208ENST00000467468 A0A1W2PQ09 198 aa4.38□□□□□ -1.71
SMC4-208ENST00000467468 TTC36A6NLP5 189 aa4.38□□□□□ -1.71
SMC4-208ENST00000467468 KCNJ18B7U540 433 aa4.38□□□□□ -1.71
SMC4-208ENST00000467468 SH2B2O14492 632 aaPredicted RBP4.38□□□□□ -1.71
SMC4-208ENST00000467468 CSPG5O95196 566 aa4.38□□□□□ -1.71
SMC4-208ENST00000467468 IGKV2-30P06310 120 aa4.38□□□□□ -1.71
SMC4-208ENST00000467468 CLTBP09497 229 aa4.38□□□□□ -1.71
SMC4-208ENST00000467468 GLULP15104 373 aa4.38□□□□□ -1.71
SMC4-208ENST00000467468 ZBTB16Q05516 673 aa4.38□□□□□ -1.71
SMC4-208ENST00000467468 IRF3Q14653 427 aa4.38□□□□□ -1.71
SMC4-208ENST00000467468 SERTAD4-AS1Q5TG53 156 aa4.38□□□□□ -1.71
SMC4-208ENST00000467468 GPR139Q6DWJ6 353 aa4.38□□□□□ -1.71
SMC4-208ENST00000467468 IL20RBQ6UXL0 311 aa4.38□□□□□ -1.71
SMC4-208ENST00000467468 FAM160B2Q86V87 743 aa4.38□□□□□ -1.71
SMC4-208ENST00000467468 PAQR4Q8N4S7 273 aaPredicted RBP4.38□□□□□ -1.71
SMC4-208ENST00000467468 PIGKQ92643 395 aa4.38□□□□□ -1.71
SMC4-208ENST00000467468 JAKMIP2Q96AA8 810 aa4.38□□□□□ -1.71
SMC4-208ENST00000467468 ADAD1Q96M93 576 aaKnown RBP4.38□□□□□ -1.71
SMC4-208ENST00000467468 CMTM3Q96MX0 182 aa4.38□□□□□ -1.71
SMC4-208ENST00000467468 FRG2BQ96QU4 278 aa4.38□□□□□ -1.71
SMC4-208ENST00000467468 FCRL5Q96RD9 977 aa4.38□□□□□ -1.71
SMC4-208ENST00000467468 ZNF347Q96SE7 839 aa4.38□□□□□ -1.71
SMC4-208ENST00000467468 SPRTNQ9H040 489 aaPredicted RBP4.38□□□□□ -1.71
SMC4-208ENST00000467468 SH2D4AQ9H788 454 aa4.38□□□□□ -1.71
SMC4-208ENST00000467468 FBRSL1Q9HCM7 1045 aaKnown RBP4.38□□□□□ -1.71
SMC4-208ENST00000467468 ZCCHC17Q9NP64 241 aaKnown RBP4.38□□□□□ -1.71
SMC4-208ENST00000467468 SNTG1Q9NSN8 517 aa4.38□□□□□ -1.71
SMC4-208ENST00000467468 SPATS2LQ9NUQ6 558 aaKnown RBP4.38□□□□□ -1.71
SMC4-208ENST00000467468 SUCLA2Q9P2R7 463 aaPredicted RBP4.38□□□□□ -1.71
SMC4-208ENST00000467468 MKLN1Q9UL63 735 aa4.38□□□□□ -1.71
SMC4-208ENST00000467468 DHDHQ9UQ10 334 aa4.38□□□□□ -1.71
SMC4-208ENST00000467468 EMSYQ7Z589 1322 aa4.38□□□□□ -1.71
SMC4-208ENST00000467468 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.37□□□□□ -1.71
SMC4-208ENST00000467468 A0A1W2PRG0 241 aa4.37□□□□□ -1.71
SMC4-208ENST00000467468 ARHGAP10A1A4S6 786 aa4.37□□□□□ -1.71
SMC4-208ENST00000467468 LRRC53A6NM62 1247 aa4.37□□□□□ -1.71
SMC4-208ENST00000467468 ADAM10O14672 748 aa4.37□□□□□ -1.71
SMC4-208ENST00000467468 LIASO43766 372 aa4.37□□□□□ -1.71
SMC4-208ENST00000467468 TLR2O60603 784 aa4.37□□□□□ -1.71
SMC4-208ENST00000467468 HNRNPCL1O60812 293 aaKnown RBP4.37□□□□□ -1.71
SMC4-208ENST00000467468 SERPINC1P01008 464 aa4.37□□□□□ -1.71
SMC4-208ENST00000467468 HEXAP06865 529 aa4.37□□□□□ -1.71
SMC4-208ENST00000467468 CTSAP10619 480 aa4.37□□□□□ -1.71
SMC4-208ENST00000467468 FCGR2AP12318 317 aa4.37□□□□□ -1.71
SMC4-208ENST00000467468 TFEBP19484 476 aa4.37□□□□□ -1.71
SMC4-208ENST00000467468 MCM3P25205 808 aa4.37□□□□□ -1.71
SMC4-208ENST00000467468 POU1F1P28069 291 aa4.37□□□□□ -1.71
SMC4-208ENST00000467468 GCH1P30793 250 aa4.37□□□□□ -1.71
SMC4-208ENST00000467468 IDUAP35475 653 aa4.37□□□□□ -1.71
SMC4-208ENST00000467468 SKIV2L2P42285 1042 aaKnown RBP4.37□□□□□ -1.71
SMC4-208ENST00000467468 DPP6P42658 865 aa4.37□□□□□ -1.71
SMC4-208ENST00000467468 GABRB2P47870 512 aa4.37□□□□□ -1.71
SMC4-208ENST00000467468 TERF1P54274 439 aa4.37□□□□□ -1.71
SMC4-208ENST00000467468 CDH8P55286 799 aa4.37□□□□□ -1.71
SMC4-208ENST00000467468 NIPAL4Q0D2K0 466 aa4.37□□□□□ -1.71
SMC4-208ENST00000467468 CSTF3Q12996 717 aaKnown RBP4.37□□□□□ -1.71
SMC4-208ENST00000467468 MTA1Q13330 715 aa4.37□□□□□ -1.71
SMC4-208ENST00000467468 RBMS2Q15434 407 aaKnown RBP4.37□□□□□ -1.71
SMC4-208ENST00000467468 ANXA2RQ3ZCQ2 193 aa4.37□□□□□ -1.71
SMC4-208ENST00000467468 TXNDC8Q6A555 127 aa4.37□□□□□ -1.71
SMC4-208ENST00000467468 ZNF793Q6ZN11 406 aa4.37□□□□□ -1.71
SMC4-208ENST00000467468 CHST9Q7L1S5 443 aa4.37□□□□□ -1.71
SMC4-208ENST00000467468 PRSS45Q7RTY3 260 aa4.37□□□□□ -1.71
SMC4-208ENST00000467468 KLBQ86Z14 1044 aa4.37□□□□□ -1.71
SMC4-208ENST00000467468 DNAAF1Q8NEP3 725 aa4.37□□□□□ -1.71
SMC4-208ENST00000467468 ZFPM2Q8WW38 1151 aa4.37□□□□□ -1.71
SMC4-208ENST00000467468 KAT2BQ92831 832 aa4.37□□□□□ -1.71
SMC4-208ENST00000467468 PGAM5Q96HS1 289 aa4.37□□□□□ -1.71
SMC4-208ENST00000467468 ZNF48Q96MX3 618 aaPredicted RBP4.37□□□□□ -1.71
SMC4-208ENST00000467468 WDFY2Q96P53 400 aa4.37□□□□□ -1.71
SMC4-208ENST00000467468 TEFMQ96QE5 360 aaKnown RBP4.37□□□□□ -1.71
SMC4-208ENST00000467468 TRMOQ9BU70 441 aa4.37□□□□□ -1.71
SMC4-208ENST00000467468 GLIS2Q9BZE0 524 aaPredicted RBP4.37□□□□□ -1.71
SMC4-208ENST00000467468 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.37□□□□□ -1.711e-147■■■■■ 345.5
SMC4-208ENST00000467468 ALDH8A1Q9H2A2 487 aaPredicted RBP4.37□□□□□ -1.71
SMC4-208ENST00000467468 POLR1BQ9H9Y6 1135 aa4.37□□□□□ -1.71
SMC4-208ENST00000467468 PDE7BQ9NP56 450 aa4.37□□□□□ -1.71
SMC4-208ENST00000467468 ATP8A2Q9NTI2 1148 aa4.37□□□□□ -1.71
SMC4-208ENST00000467468 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.37□□□□□ -1.71
SMC4-208ENST00000467468 BABAM1Q9NWV8 329 aa4.37□□□□□ -1.71
SMC4-208ENST00000467468 IPO11Q9UI26 975 aaKnown RBP4.37□□□□□ -1.71
SMC4-208ENST00000467468 A4GNTQ9UNA3 340 aa4.37□□□□□ -1.71
SMC4-208ENST00000467468 ICKQ9UPZ9 632 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms