RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, human

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDC42BPA-211	ENST00000466538	ATOH1	Q92858	354 aa	Predicted RBP	4.58	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	SNAPC3	Q92966	411 aa		4.58	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	GTF3C6	Q969F1	213 aa		4.58	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	ZG16B	Q96DA0	208 aa		4.58	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	PERP	Q96FX8	193 aa		4.58	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	ZNF419	Q96HQ0	510 aa	Predicted RBP	4.58	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	QTRT1	Q9BXR0	403 aa	Known RBP	4.58	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	GLIS2	Q9BZE0	524 aa	Predicted RBP	4.58	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	B3GNT4	Q9C0J1	378 aa		4.58	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	DLGAP2	Q9P1A6	1054 aa		4.58	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	ZNF70	Q9UC06	446 aa	Predicted RBP	4.58	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	ZMYM2	Q9UBW7	1377 aa		4.57	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	TTBK1	Q5TCY1	1321 aa	Predicted RBP	4.57	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	KLRF2	D3W0D1	207 aa		4.57	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	SCAMP1	O15126	338 aa		4.57	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	FIBP	O43427	364 aa		4.57	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	TIMM44	O43615	452 aa		4.57	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	LIAS	O43766	372 aa		4.57	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	SLC25A17	O43808	307 aa		4.57	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	IPO7	O95373	1038 aa	Known RBP	4.57	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	IFNA2	P01563	188 aa		4.57	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	CELA2A	P08217	269 aa		4.57	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	PIP4K2A	P48426	406 aa	Predicted RBP	4.57	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	EFNA5	P52803	228 aa		4.57	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	CLDN2	P57739	230 aa		4.57	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	CREB5	Q02930	508 aa		4.57	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	ACVR2B	Q13705	512 aa		4.57	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	RUNX2	Q13950	521 aa		4.57	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	WTAP	Q15007	396 aa		4.57	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	MED22	Q15528	200 aa		4.57	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	KRT24	Q2M2I5	525 aa		4.57	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	DCAF6	Q58WW2	860 aa		4.57	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	TTI2	Q6NXR4	508 aa		4.57	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	TMEM154	Q6P9G4	183 aa		4.57	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	KLHL35	Q6PF15	583 aa		4.57	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	C16orf54	Q6UWD8	224 aa		4.57	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	YTHDF3	Q7Z739	585 aa	Known RBP	4.57	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	CNGA4	Q8IV77	575 aa		4.57	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	LRRC57	Q8N9N7	239 aa		4.57	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	PRSS3P2	Q8NHM4	247 aa		4.57	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	PIGO	Q8TEQ8	1089 aa		4.57	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	TMEM174	Q8WUU8	243 aa		4.57	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	EME1	Q96AY2	570 aa		4.57	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	CCDC34	Q96HJ3	373 aa		4.57	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	YME1L1	Q96TA2	773 aa		4.57	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	TRMO	Q9BU70	441 aa		4.57	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	AAMDC	Q9H7C9	122 aa		4.57	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	KAT14	Q9H8E8	782 aa		4.57	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	SCPEP1	Q9HB40	452 aa		4.57	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	SMYD2	Q9NRG4	433 aa		4.57	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	TMEM184C	Q9NVA4	438 aa		4.57	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	ANKRD10	Q9NXR5	420 aa		4.57	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	CLIC5	Q9NZA1	410 aa		4.57	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	PLEKHB1	Q9UF11	243 aa	Predicted RBP	4.57	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	TBC1D29	Q9UFV1	150 aa		4.57	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	NDRG3	Q9UGV2	375 aa		4.57	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	MTMR6	Q9Y217	621 aa		4.57	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	CAPN7	Q9Y6W3	813 aa		4.57	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	PASK	Q96RG2	1323 aa		4.56	□□□□□ -1.68
CDC42BPA-211	ENST00000466538		A0A0G2JK05	382 aa		4.56	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	ZNF814	B7Z6K7	855 aa		4.56	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	NPIPB11	E5RHQ5	1161 aa		4.56	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	VILL	O15195	856 aa		4.56	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	HNRNPCL1	O60812	293 aa	Known RBP	4.56	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	RARG	P13631	454 aa		4.56	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	SRD5A1	P18405	259 aa		4.56	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	KEL	P23276	732 aa		4.56	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	HOXD9	P28356	352 aa	Predicted RBP	4.56	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	PPARG	P37231	505 aa	Predicted RBP	4.56	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	PBX3	P40426	434 aa		4.56	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	RASSF2	P50749	326 aa		4.56	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	HMGA2	P52926	109 aa		4.56	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	HDAC4	P56524	1084 aa		4.56	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	FRG1	Q14331	258 aa	Known RBP	4.56	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	DUSP28	Q4G0W2	176 aa		4.56	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	PLEKHS1	Q5SXH7	462 aa		4.56	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	C10orf25	Q5T742	122 aa		4.56	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	HEPHL1	Q6MZM0	1159 aa		4.56	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	HMBOX1	Q6NT76	420 aa		4.56	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	TSSK4	Q6SA08	328 aa		4.56	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	TICAM1	Q8IUC6	712 aa		4.56	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	LURAP1L	Q8IV03	231 aa		4.56	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	DENND6A	Q8IWF6	608 aa		4.56	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	ADGRF2	Q8IZF7	708 aa		4.56	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	ZCCHC9	Q8N567	271 aa	Known RBP	4.56	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	TEX45	Q8NA69	505 aa		4.56	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	TMEM163	Q8TC26	289 aa		4.56	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	COQ8B	Q96D53	544 aa		4.56	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	MSI2	Q96DH6	328 aa	Known RBP	4.56	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	FAM120B	Q96EK7	910 aa	Known RBP	4.56	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	TMEM68	Q96MH6	324 aa		4.56	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	CMTM3	Q96MX0	182 aa		4.56	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	SIN3A	Q96ST3	1273 aa		4.56	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	NCAPG	Q9BPX3	1015 aa		4.56	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	TMPRSS5	Q9H3S3	457 aa		4.56	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	SMARCAD1	Q9H4L7	1026 aa		4.56	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	SH2D4A	Q9H788	454 aa		4.56	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	MVB12B	Q9H7P6	319 aa		4.56	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	FZD3	Q9NPG1	666 aa		4.56	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	NRIP3	Q9NQ35	241 aa		4.56	□□□□□ -1.68

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