RNA–Protein interactions for RNA: ENST00000465601.1

CHPF2-202, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 3

Gene CHPF2, Length 782 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-202ENST00000465601 ADRB3P13945 408 aa12.52□□□□□ -0.41
CHPF2-202ENST00000465601 TIMP2P16035 220 aa12.52□□□□□ -0.41
CHPF2-202ENST00000465601 ITIH2P19823 946 aa12.52□□□□□ -0.41
CHPF2-202ENST00000465601 CR2P20023 1033 aa12.52□□□□□ -0.41
CHPF2-202ENST00000465601 TGM2P21980 687 aa12.52□□□□□ -0.41
CHPF2-202ENST00000465601 HSPA9P38646 679 aaKnown RBP12.52□□□□□ -0.41
CHPF2-202ENST00000465601 CETN2P41208 172 aa12.52□□□□□ -0.41
CHPF2-202ENST00000465601 NR2C2P49116 596 aa12.52□□□□□ -0.41
CHPF2-202ENST00000465601 PPP2CBP62714 309 aa12.52□□□□□ -0.41
CHPF2-202ENST00000465601 PPP2CAP67775 309 aa12.52□□□□□ -0.41
CHPF2-202ENST00000465601 SF3A2Q15428 464 aaKnown RBP12.52□□□□□ -0.41
CHPF2-202ENST00000465601 CCDC181Q5TID7 509 aa12.52□□□□□ -0.41
CHPF2-202ENST00000465601 BBS12Q6ZW61 710 aa12.52□□□□□ -0.41
CHPF2-202ENST00000465601 BZW1Q7L1Q6 419 aaKnown RBP12.52□□□□□ -0.41
CHPF2-202ENST00000465601 TTC7BQ86TV6 843 aa12.52□□□□□ -0.41
CHPF2-202ENST00000465601 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.52□□□□□ -0.41
CHPF2-202ENST00000465601 P3H4Q92791 437 aa12.52□□□□□ -0.41
CHPF2-202ENST00000465601 FATE1Q969F0 183 aa12.52□□□□□ -0.41
CHPF2-202ENST00000465601 HES6Q96HZ4 224 aa12.52□□□□□ -0.41
CHPF2-202ENST00000465601 OLFM3Q96PB7 478 aa12.52□□□□□ -0.41
CHPF2-202ENST00000465601 NUDCD1Q96RS6 583 aa12.52□□□□□ -0.41
CHPF2-202ENST00000465601 MGME1Q9BQP7 344 aa12.52□□□□□ -0.41
CHPF2-202ENST00000465601 KDM4CQ9H3R0 1056 aa12.52□□□□□ -0.41
CHPF2-202ENST00000465601 ATP13A3Q9H7F0 1226 aa12.52□□□□□ -0.41
CHPF2-202ENST00000465601 NOD2Q9HC29 1040 aa12.52□□□□□ -0.41
CHPF2-202ENST00000465601 SCUBE2Q9NQ36 999 aa12.52□□□□□ -0.41
CHPF2-202ENST00000465601 VPS45Q9NRW7 570 aa12.52□□□□□ -0.41
CHPF2-202ENST00000465601 SLCO1B1Q9Y6L6 691 aa12.52□□□□□ -0.41
CHPF2-202ENST00000465601 PLXNA2O75051 1894 aa12.52□□□□□ -0.41
CHPF2-202ENST00000465601 DMXL1Q9Y485 3027 aa12.52□□□□□ -0.41
CHPF2-202ENST00000465601 SPTBN2O15020 2390 aa12.51□□□□□ -0.41
CHPF2-202ENST00000465601 TDRD6O60522 2096 aaKnown RBP12.51□□□□□ -0.41
CHPF2-202ENST00000465601 RNGTTO60942 597 aaKnown RBP12.51□□□□□ -0.41
CHPF2-202ENST00000465601 NEBLO76041 1014 aa12.51□□□□□ -0.41
CHPF2-202ENST00000465601 PCDH8O95206 1070 aa12.51□□□□□ -0.41
CHPF2-202ENST00000465601 ZNF806P0C7X5 589 aa12.51□□□□□ -0.41
CHPF2-202ENST00000465601 MAT2AP31153 395 aaKnown RBP12.51□□□□□ -0.41
CHPF2-202ENST00000465601 HOXD11P31277 338 aaPredicted RBP12.51□□□□□ -0.41
CHPF2-202ENST00000465601 ABL2P42684 1182 aa12.51□□□□□ -0.41
CHPF2-202ENST00000465601 CCR5P51681 352 aa12.51□□□□□ -0.41
CHPF2-202ENST00000465601 AP1S1P61966 158 aa12.51□□□□□ -0.41
CHPF2-202ENST00000465601 BCL2L1Q07817 233 aa12.51□□□□□ -0.41
CHPF2-202ENST00000465601 GRM3Q14832 879 aa12.51□□□□□ -0.41
CHPF2-202ENST00000465601 CSRP2Q16527 193 aa12.51□□□□□ -0.41
CHPF2-202ENST00000465601 LRRC73Q5JTD7 316 aa12.51□□□□□ -0.41
CHPF2-202ENST00000465601 TCEAL6Q6IPX3 200 aa12.51□□□□□ -0.41
CHPF2-202ENST00000465601 ZC3H18Q86VM9 953 aaKnown RBP12.51□□□□□ -0.41
CHPF2-202ENST00000465601 KIAA2013Q8IYS2 634 aa12.51□□□□□ -0.41
CHPF2-202ENST00000465601 ZCCHC9Q8N567 271 aaKnown RBP12.51□□□□□ -0.41
CHPF2-202ENST00000465601 KLK6Q92876 244 aa12.51□□□□□ -0.41
CHPF2-202ENST00000465601 TCEAL3Q969E4 200 aa12.51□□□□□ -0.41
CHPF2-202ENST00000465601 ZNF641Q96N77 438 aaPredicted RBP12.51□□□□□ -0.41
CHPF2-202ENST00000465601 ALS2CR12Q96Q35 445 aa12.51□□□□□ -0.41
CHPF2-202ENST00000465601 TUBGCP5Q96RT8 1024 aa12.51□□□□□ -0.41
CHPF2-202ENST00000465601 SEMA3CQ99985 751 aa12.51□□□□□ -0.41
CHPF2-202ENST00000465601 BRD8Q9H0E9 1235 aa12.51□□□□□ -0.41
CHPF2-202ENST00000465601 EBF2Q9HAK2 575 aa12.51□□□□□ -0.41
CHPF2-202ENST00000465601 PREBQ9HCU5 417 aa12.51□□□□□ -0.41
CHPF2-202ENST00000465601 SEPT10Q9P0V9 454 aa12.51□□□□□ -0.41
CHPF2-202ENST00000465601 DKK3Q9UBP4 350 aa12.51□□□□□ -0.41
CHPF2-202ENST00000465601 EFR3BQ9Y2G0 817 aa12.51□□□□□ -0.41
CHPF2-202ENST00000465601 TTLL3Q9Y4R7 772 aa12.51□□□□□ -0.41
CHPF2-202ENST00000465601 PCDHGC4Q9Y5F7 938 aa12.51□□□□□ -0.41
CHPF2-202ENST00000465601 FADS3Q9Y5Q0 445 aa12.51□□□□□ -0.41
CHPF2-202ENST00000465601 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.5□□□□□ -0.41
CHPF2-202ENST00000465601 A0A1W2PPC4 97 aa12.5□□□□□ -0.41
CHPF2-202ENST00000465601 A0A1W2PQU0 124 aa12.5□□□□□ -0.41
CHPF2-202ENST00000465601 C10orf142B7Z368 130 aa12.5□□□□□ -0.41
CHPF2-202ENST00000465601 APOC4-APOC2K7ER74 178 aa12.5□□□□□ -0.41
CHPF2-202ENST00000465601 KHNYNO15037 678 aaKnown RBP12.5□□□□□ -0.41
CHPF2-202ENST00000465601 APOC2P02655 101 aa12.5□□□□□ -0.41
CHPF2-202ENST00000465601 CFIP05156 583 aa12.5□□□□□ -0.41
CHPF2-202ENST00000465601 HLA-DQB2P05538 268 aa12.5□□□□□ -0.41
CHPF2-202ENST00000465601 GNSP15586 552 aa12.5□□□□□ -0.41
CHPF2-202ENST00000465601 XPAP23025 273 aaPredicted RBP12.5□□□□□ -0.41
CHPF2-202ENST00000465601 CD27P26842 260 aa12.5□□□□□ -0.41
CHPF2-202ENST00000465601 SERPINA4P29622 427 aa12.5□□□□□ -0.41
CHPF2-202ENST00000465601 PTPN7P35236 360 aa12.5□□□□□ -0.41
CHPF2-202ENST00000465601 DPP6P42658 865 aa12.5□□□□□ -0.41
CHPF2-202ENST00000465601 MAPK8P45983 427 aa12.5□□□□□ -0.41
CHPF2-202ENST00000465601 IRX4P78413 519 aa12.5□□□□□ -0.41
CHPF2-202ENST00000465601 IFI35P80217 286 aaPredicted RBP12.5□□□□□ -0.41
CHPF2-202ENST00000465601 DSC2Q02487 901 aa12.5□□□□□ -0.41
CHPF2-202ENST00000465601 NIPAL4Q0D2K0 466 aa12.5□□□□□ -0.41
CHPF2-202ENST00000465601 ZBTB17Q13105 803 aa12.5□□□□□ -0.41
CHPF2-202ENST00000465601 RPS6KA1Q15418 735 aa12.5□□□□□ -0.41
CHPF2-202ENST00000465601 DUOXA1Q1HG43 343 aa12.5□□□□□ -0.41
CHPF2-202ENST00000465601 TRIM61Q5EBN2 209 aa12.5□□□□□ -0.41
CHPF2-202ENST00000465601 CFAP58Q5T655 872 aa12.5□□□□□ -0.41
CHPF2-202ENST00000465601 MEI1Q5TIA1 1274 aa12.5□□□□□ -0.41
CHPF2-202ENST00000465601 PEAR1Q5VY43 1037 aaPredicted RBP12.5□□□□□ -0.41
CHPF2-202ENST00000465601 PRR23CQ6ZRP0 262 aa12.5□□□□□ -0.41
CHPF2-202ENST00000465601 PRPF39Q86UA1 669 aaKnown RBP12.5□□□□□ -0.41
CHPF2-202ENST00000465601 ZSWIM9Q86XI8 627 aa12.5□□□□□ -0.41
CHPF2-202ENST00000465601 REXO1L1PQ8IX06 675 aa12.5□□□□□ -0.41
CHPF2-202ENST00000465601 GPR161Q8N6U8 529 aaKnown RBP12.5□□□□□ -0.41
CHPF2-202ENST00000465601 PAF1Q8N7H5 531 aa12.5□□□□□ -0.41
CHPF2-202ENST00000465601 C1orf216Q8TAB5 229 aa12.5□□□□□ -0.41
CHPF2-202ENST00000465601 CEP76Q8TAP6 659 aa12.5□□□□□ -0.41
CHPF2-202ENST00000465601 HCAR2Q8TDS4 363 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms