RNA–Protein interactions for RNA: ENST00000465155.5

ATF3-208, Transcript of activating transcription factor 3, human

TSL 2

Gene ATF3, Length 1,626 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATF3-208	ENST00000465155	MTM1	Q13496	603 aa		13.53	□□□□□ -0.24
ATF3-208	ENST00000465155	SLC14A2	Q15849	920 aa		13.53	□□□□□ -0.24
ATF3-208	ENST00000465155	PPP1R21	Q6ZMI0	780 aa		13.53	□□□□□ -0.24
ATF3-208	ENST00000465155	UBALD2	Q8IYN6	164 aa		13.53	□□□□□ -0.24
ATF3-208	ENST00000465155	ZCCHC9	Q8N567	271 aa	Known RBP	13.53	□□□□□ -0.24
ATF3-208	ENST00000465155	EIF1AD	Q8N9N8	165 aa	Known RBP	13.53	□□□□□ -0.24
ATF3-208	ENST00000465155	MCU	Q8NE86	351 aa		13.53	□□□□□ -0.24
ATF3-208	ENST00000465155	PDCD6IP	Q8WUM4	868 aa	Known RBP	13.53	□□□□□ -0.24
ATF3-208	ENST00000465155	IFT43	Q96FT9	208 aa		13.53	□□□□□ -0.24
ATF3-208	ENST00000465155	FMO2	Q99518	471 aa		13.53	□□□□□ -0.24
ATF3-208	ENST00000465155	TBL1Y	Q9BQ87	522 aa		13.53	□□□□□ -0.24
ATF3-208	ENST00000465155	ATP13A3	Q9H7F0	1226 aa		13.53	□□□□□ -0.24
ATF3-208	ENST00000465155	PIH1D1	Q9NWS0	290 aa	Known RBP	13.53	□□□□□ -0.24
ATF3-208	ENST00000465155	MTRF1L	Q9UGC7	380 aa	Known RBP	13.53	□□□□□ -0.24
ATF3-208	ENST00000465155	MUTYH	Q9UIF7	546 aa		13.53	□□□□□ -0.24
ATF3-208	ENST00000465155	RAI2	Q9Y5P3	530 aa		13.53	□□□□□ -0.24
ATF3-208	ENST00000465155	F5	P12259	2224 aa		13.53	□□□□□ -0.24
ATF3-208	ENST00000465155	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	13.53	□□□□□ -0.24
ATF3-208	ENST00000465155	RNF40	O75150	1001 aa		13.53	□□□□□ -0.24
ATF3-208	ENST00000465155	SIN3B	O75182	1162 aa		13.53	□□□□□ -0.24
ATF3-208	ENST00000465155	CA4	P22748	312 aa		13.53	□□□□□ -0.24
ATF3-208	ENST00000465155	ADRA1A	P35348	466 aa		13.53	□□□□□ -0.24
ATF3-208	ENST00000465155	TNNT3	P45378	269 aa	Predicted RBP	13.53	□□□□□ -0.24
ATF3-208	ENST00000465155	CDK18	Q07002	472 aa		13.53	□□□□□ -0.24
ATF3-208	ENST00000465155	TRAF2	Q12933	501 aa		13.53	□□□□□ -0.24
ATF3-208	ENST00000465155	ENPP2	Q13822	863 aa		13.53	□□□□□ -0.24
ATF3-208	ENST00000465155	CCIN	Q13939	588 aa		13.53	□□□□□ -0.24
ATF3-208	ENST00000465155	FBXO43	Q4G163	708 aa		13.53	□□□□□ -0.24
ATF3-208	ENST00000465155	C9orf64	Q5T6V5	341 aa		13.53	□□□□□ -0.24
ATF3-208	ENST00000465155	ZNF534	Q76KX8	674 aa		13.53	□□□□□ -0.24
ATF3-208	ENST00000465155	LINC00523	Q86TU6	105 aa		13.53	□□□□□ -0.24
ATF3-208	ENST00000465155	CAMK1D	Q8IU85	385 aa		13.53	□□□□□ -0.24
ATF3-208	ENST00000465155	SIX5	Q8N196	739 aa		13.53	□□□□□ -0.24
ATF3-208	ENST00000465155	IL17RC	Q8NAC3	791 aa		13.53	□□□□□ -0.24
ATF3-208	ENST00000465155	OR52K1	Q8NGK4	314 aa		13.53	□□□□□ -0.24
ATF3-208	ENST00000465155	GRIN3A	Q8TCU5	1115 aa		13.53	□□□□□ -0.24
ATF3-208	ENST00000465155	KCNV2	Q8TDN2	545 aa		13.53	□□□□□ -0.24
ATF3-208	ENST00000465155	ERLEC1	Q96DZ1	483 aa		13.53	□□□□□ -0.24
ATF3-208	ENST00000465155	SHD	Q96IW2	340 aa		13.53	□□□□□ -0.24
ATF3-208	ENST00000465155	SERPINB12	Q96P63	405 aa		13.53	□□□□□ -0.24
ATF3-208	ENST00000465155	NECAB3	Q96P71	396 aa	Predicted RBP	13.53	□□□□□ -0.24
ATF3-208	ENST00000465155	TUBGCP5	Q96RT8	1024 aa		13.53	□□□□□ -0.24
ATF3-208	ENST00000465155	HEPH	Q9BQS7	1158 aa		13.53	□□□□□ -0.24
ATF3-208	ENST00000465155	TDRD1	Q9BXT4	1180 aa	Known RBP	13.53	□□□□□ -0.24
ATF3-208	ENST00000465155	CPEB1	Q9BZB8	566 aa	Known RBP	13.53	□□□□□ -0.24
ATF3-208	ENST00000465155	SUN2	Q9UH99	717 aa		13.53	□□□□□ -0.24
ATF3-208	ENST00000465155	IL36A	Q9UHA7	158 aa		13.53	□□□□□ -0.24
ATF3-208	ENST00000465155	CHKB	Q9Y259	395 aa		13.53	□□□□□ -0.24
ATF3-208	ENST00000465155	CKAP5	Q14008	2032 aa		13.52	□□□□□ -0.24
ATF3-208	ENST00000465155	AVIL	O75366	819 aa		13.52	□□□□□ -0.25
ATF3-208	ENST00000465155	KLF8	O95600	359 aa	Predicted RBP	13.52	□□□□□ -0.25
ATF3-208	ENST00000465155	CHRM1	P11229	460 aa	Predicted RBP	13.52	□□□□□ -0.25
ATF3-208	ENST00000465155	SERPINA4	P29622	427 aa		13.52	□□□□□ -0.25
ATF3-208	ENST00000465155	NTSR1	P30989	418 aa		13.52	□□□□□ -0.25
ATF3-208	ENST00000465155	CHRNA4	P43681	627 aa		13.52	□□□□□ -0.25
ATF3-208	ENST00000465155	ARL4C	P56559	192 aa		13.52	□□□□□ -0.25
ATF3-208	ENST00000465155	MRPS21	P82921	87 aa	Known RBP	13.52	□□□□□ -0.25
ATF3-208	ENST00000465155	GRM3	Q14832	879 aa		13.52	□□□□□ -0.25
ATF3-208	ENST00000465155	HIF1A	Q16665	826 aa		13.52	□□□□□ -0.25
ATF3-208	ENST00000465155	FNBP1L	Q5T0N5	605 aa		13.52	□□□□□ -0.25
ATF3-208	ENST00000465155	SDE2	Q6IQ49	451 aa		13.52	□□□□□ -0.25
ATF3-208	ENST00000465155	LRRC8B	Q6P9F7	803 aa		13.52	□□□□□ -0.25
ATF3-208	ENST00000465155	RANBP10	Q6VN20	620 aa		13.52	□□□□□ -0.25
ATF3-208	ENST00000465155	CAND1	Q86VP6	1230 aa	Known RBP	13.52	□□□□□ -0.25
ATF3-208	ENST00000465155	CCDC25	Q86WR0	208 aa		13.52	□□□□□ -0.25
ATF3-208	ENST00000465155	STK40	Q8N2I9	435 aa		13.52	□□□□□ -0.25
ATF3-208	ENST00000465155	SLC25A41	Q8N5S1	370 aa		13.52	□□□□□ -0.25
ATF3-208	ENST00000465155	PAF1	Q8N7H5	531 aa		13.52	□□□□□ -0.25
ATF3-208	ENST00000465155	DNAAF3	Q8N9W5	541 aa		13.52	□□□□□ -0.25
ATF3-208	ENST00000465155	VOPP1	Q96AW1	172 aa		13.52	□□□□□ -0.25
ATF3-208	ENST00000465155	FEM1C	Q96JP0	617 aa		13.52	□□□□□ -0.25
ATF3-208	ENST00000465155	FRMD8	Q9BZ67	464 aa	Predicted RBP	13.52	□□□□□ -0.25
ATF3-208	ENST00000465155	XAB2	Q9HCS7	855 aa	Known RBP	13.52	□□□□□ -0.25
ATF3-208	ENST00000465155	PRSS16	Q9NQE7	514 aa		13.52	□□□□□ -0.25
ATF3-208	ENST00000465155	WASF2	Q9Y6W5	498 aa		13.52	□□□□□ -0.25
ATF3-208	ENST00000465155	MYLK	Q15746	1914 aa		13.51	□□□□□ -0.25
ATF3-208	ENST00000465155	LOC285095	A0A1B0GVY8	99 aa		13.51	□□□□□ -0.25
ATF3-208	ENST00000465155	TRAFD1	O14545	582 aa	Predicted RBP	13.51	□□□□□ -0.25
ATF3-208	ENST00000465155	SOCS5	O75159	536 aa		13.51	□□□□□ -0.25
ATF3-208	ENST00000465155	PPFIA2	O75334	1257 aa		13.51	□□□□□ -0.25
ATF3-208	ENST00000465155	LEFTY1	O75610	366 aa		13.51	□□□□□ -0.25
ATF3-208	ENST00000465155	UGT2B4	P06133	528 aa		13.51	□□□□□ -0.25
ATF3-208	ENST00000465155	CTSL	P07711	333 aa		13.51	□□□□□ -0.25
ATF3-208	ENST00000465155	PDHA1	P08559	390 aa		13.51	□□□□□ -0.25
ATF3-208	ENST00000465155	FAM153B	P0C7A2	387 aa		13.51	□□□□□ -0.25
ATF3-208	ENST00000465155	STARD6	P59095	220 aa		13.51	□□□□□ -0.25
ATF3-208	ENST00000465155	CDH17	Q12864	832 aa		13.51	□□□□□ -0.25
ATF3-208	ENST00000465155	GALNT3	Q14435	633 aa		13.51	□□□□□ -0.25
ATF3-208	ENST00000465155	ELAVL3	Q14576	367 aa	Known RBP	13.51	□□□□□ -0.25
ATF3-208	ENST00000465155	SLC1A5	Q15758	541 aa		13.51	□□□□□ -0.25
ATF3-208	ENST00000465155	FAM153C	Q494X1	144 aa		13.51	□□□□□ -0.25
ATF3-208	ENST00000465155	ARSI	Q5FYB1	569 aa		13.51	□□□□□ -0.25
ATF3-208	ENST00000465155	TRMT11	Q7Z4G4	463 aa	Known RBP	13.51	□□□□□ -0.25
ATF3-208	ENST00000465155	PDIK1L	Q8N165	341 aa		13.51	□□□□□ -0.25
ATF3-208	ENST00000465155	TXNDC5	Q8NBS9	432 aa	Known RBP	13.51	□□□□□ -0.25
ATF3-208	ENST00000465155	RPLP0P6	Q8NHW5	317 aa		13.51	□□□□□ -0.25
ATF3-208	ENST00000465155	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	13.51	□□□□□ -0.25
ATF3-208	ENST00000465155	OR8D1	Q8WZ84	308 aa		13.51	□□□□□ -0.25
ATF3-208	ENST00000465155	TRIB3	Q96RU7	358 aa		13.51	□□□□□ -0.25
ATF3-208	ENST00000465155	FOXP3	Q9BZS1	431 aa		13.51	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms