RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 LHX6Q9UPM6 363 aa17.72■□□□□ 0.43
CPSF4-209ENST00000465132 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.72■□□□□ 0.43
CPSF4-209ENST00000465132 PCDHGB2Q9Y5G2 931 aa17.72■□□□□ 0.43
CPSF4-209ENST00000465132 WDFY3Q8IZQ1 3526 aa17.72■□□□□ 0.43
CPSF4-209ENST00000465132 ZFYVE26Q68DK2 2539 aa17.71■□□□□ 0.43
CPSF4-209ENST00000465132 A0A0D9SEW6 157 aa17.71■□□□□ 0.43
CPSF4-209ENST00000465132 PGRMC1O00264 195 aaKnown RBP17.71■□□□□ 0.43
CPSF4-209ENST00000465132 MCF2LO15068 1137 aa17.71■□□□□ 0.43
CPSF4-209ENST00000465132 STK10O94804 968 aaKnown RBP17.71■□□□□ 0.43
CPSF4-209ENST00000465132 ATP1A1P05023 1023 aaKnown RBP17.71■□□□□ 0.43
CPSF4-209ENST00000465132 HOXB3P14651 431 aaPredicted RBP17.71■□□□□ 0.43
CPSF4-209ENST00000465132 GARSP41250 739 aaKnown RBP17.71■□□□□ 0.43
CPSF4-209ENST00000465132 RENBPP51606 427 aa17.71■□□□□ 0.43
CPSF4-209ENST00000465132 RPS14P62263 151 aaKnown RBP17.71■□□□□ 0.43
CPSF4-209ENST00000465132 ZNF211Q13398 564 aaPredicted RBP17.71■□□□□ 0.43
CPSF4-209ENST00000465132 LONRF2Q1L5Z9 754 aa17.71■□□□□ 0.43
CPSF4-209ENST00000465132 KIF19Q2TAC6 998 aa17.71■□□□□ 0.43
CPSF4-209ENST00000465132 SLC13A5Q86YT5 568 aaPredicted RBP17.71■□□□□ 0.43
CPSF4-209ENST00000465132 APCDD1Q8J025 514 aa17.71■□□□□ 0.43
CPSF4-209ENST00000465132 CCNYQ8ND76 341 aa17.71■□□□□ 0.43
CPSF4-209ENST00000465132 OR7D4Q8NG98 312 aa17.71■□□□□ 0.43
CPSF4-209ENST00000465132 HDAC11Q96DB2 347 aa17.71■□□□□ 0.43
CPSF4-209ENST00000465132 ALG14Q96F25 216 aa17.71■□□□□ 0.43
CPSF4-209ENST00000465132 HMCESQ96FZ2 354 aa17.71■□□□□ 0.43
CPSF4-209ENST00000465132 TSGA13Q96PP4 275 aa17.71■□□□□ 0.43
CPSF4-209ENST00000465132 KLC2Q9H0B6 622 aa17.71■□□□□ 0.43
CPSF4-209ENST00000465132 NDFIP2Q9NV92 336 aa17.71■□□□□ 0.43
CPSF4-209ENST00000465132 DTLQ9NZJ0 730 aa17.71■□□□□ 0.43
CPSF4-209ENST00000465132 UBA2Q9UBT2 640 aaPredicted RBP17.71■□□□□ 0.43
CPSF4-209ENST00000465132 AMACRQ9UHK6 382 aa17.71■□□□□ 0.43
CPSF4-209ENST00000465132 VPS51Q9UID3 782 aa17.71■□□□□ 0.43
CPSF4-209ENST00000465132 ERVW-1Q9UQF0 538 aa17.71■□□□□ 0.43
CPSF4-209ENST00000465132 HS3ST2Q9Y278 367 aa17.71■□□□□ 0.43
CPSF4-209ENST00000465132 MUC22E2RYF6 1773 aaPredicted RBP17.71■□□□□ 0.43
CPSF4-209ENST00000465132 FLRT2O43155 660 aa17.7■□□□□ 0.42
CPSF4-209ENST00000465132 MFSD11O43934 449 aa17.7■□□□□ 0.42
CPSF4-209ENST00000465132 PRAMEF11O60813 436 aa17.7■□□□□ 0.42
CPSF4-209ENST00000465132 SEMA4FO95754 770 aa17.7■□□□□ 0.42
CPSF4-209ENST00000465132 FGGP02679 453 aa17.7■□□□□ 0.42
CPSF4-209ENST00000465132 DNTTP04053 509 aa17.7■□□□□ 0.42
CPSF4-209ENST00000465132 HSPA9P38646 679 aaKnown RBP17.7■□□□□ 0.42
CPSF4-209ENST00000465132 RECQLP46063 649 aaPredicted RBP17.7■□□□□ 0.42
CPSF4-209ENST00000465132 CDKL3Q8IVW4 592 aaPredicted RBP17.7■□□□□ 0.42
CPSF4-209ENST00000465132 ARHGAP12Q8IWW6 846 aa17.7■□□□□ 0.42
CPSF4-209ENST00000465132 C17orf53Q8N3J3 647 aaPredicted RBP17.7■□□□□ 0.42
CPSF4-209ENST00000465132 NPWQ8N729 165 aa17.7■□□□□ 0.42
CPSF4-209ENST00000465132 ATP11CQ8NB49 1132 aa17.7■□□□□ 0.42
CPSF4-209ENST00000465132 KIF18AQ8NI77 898 aa17.7■□□□□ 0.42
CPSF4-209ENST00000465132 ACTRT1Q8TDG2 376 aa17.7■□□□□ 0.42
CPSF4-209ENST00000465132 TFB1MQ8WVM0 346 aaKnown RBP17.7■□□□□ 0.42
CPSF4-209ENST00000465132 ISG20Q96AZ6 181 aaKnown RBP17.7■□□□□ 0.42
CPSF4-209ENST00000465132 BIRC7Q96CA5 298 aa17.7■□□□□ 0.42
CPSF4-209ENST00000465132 WDR24Q96S15 920 aa17.7■□□□□ 0.42
CPSF4-209ENST00000465132 PSMB7Q99436 277 aa17.7■□□□□ 0.42
CPSF4-209ENST00000465132 CDC6Q99741 560 aa17.7■□□□□ 0.42
CPSF4-209ENST00000465132 BTBD1Q9H0C5 482 aa17.7■□□□□ 0.42
CPSF4-209ENST00000465132 NOL6Q9H6R4 1146 aaKnown RBP17.7■□□□□ 0.42
CPSF4-209ENST00000465132 TM9SF3Q9HD45 589 aa17.7■□□□□ 0.42
CPSF4-209ENST00000465132 ETNK2Q9NVF9 386 aa17.7■□□□□ 0.42
CPSF4-209ENST00000465132 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.7■□□□□ 0.42
CPSF4-209ENST00000465132 INTS6Q9UL03 887 aaKnown RBP17.7■□□□□ 0.42
CPSF4-209ENST00000465132 SNX11Q9Y5W9 270 aa17.7■□□□□ 0.42
CPSF4-209ENST00000465132 TARSL2A2RTX5 802 aaKnown RBP17.69■□□□□ 0.42
CPSF4-209ENST00000465132 CFAP69A5D8W1 941 aa17.69■□□□□ 0.42
CPSF4-209ENST00000465132 CXCR5P32302 372 aa17.69■□□□□ 0.42
CPSF4-209ENST00000465132 ACVRL1P37023 503 aa17.69■□□□□ 0.42
CPSF4-209ENST00000465132 SERPINH1P50454 418 aaKnown RBP17.69■□□□□ 0.42
CPSF4-209ENST00000465132 GBE1Q04446 702 aa17.69■□□□□ 0.42
CPSF4-209ENST00000465132 PPIDQ08752 370 aaKnown RBP17.69■□□□□ 0.42
CPSF4-209ENST00000465132 SFSWAPQ12872 951 aaKnown RBP17.69■□□□□ 0.42
CPSF4-209ENST00000465132 TEAD4Q15561 434 aa17.69■□□□□ 0.42
CPSF4-209ENST00000465132 MARC1Q5VT66 337 aa17.69■□□□□ 0.42
CPSF4-209ENST00000465132 SYT10Q6XYQ8 523 aa17.69■□□□□ 0.42
CPSF4-209ENST00000465132 CCDC13Q8IYE1 715 aa17.69■□□□□ 0.42
CPSF4-209ENST00000465132 RASGEF1CQ8N431 466 aa17.69■□□□□ 0.42
CPSF4-209ENST00000465132 RHBDD1Q8TEB9 315 aa17.69■□□□□ 0.42
CPSF4-209ENST00000465132 VAT1Q99536 393 aa17.69■□□□□ 0.42
CPSF4-209ENST00000465132 TOR4AQ9NXH8 423 aa17.69■□□□□ 0.42
CPSF4-209ENST00000465132 FEZ2Q9UHY8 353 aaPredicted RBP17.69■□□□□ 0.42
CPSF4-209ENST00000465132 EDDM13A0A1B0GTR0 161 aa17.68■□□□□ 0.42
CPSF4-209ENST00000465132 H7C0C1 242 aa17.68■□□□□ 0.42
CPSF4-209ENST00000465132 MATN3O15232 486 aa17.68■□□□□ 0.42
CPSF4-209ENST00000465132 DKK1O94907 266 aa17.68■□□□□ 0.42
CPSF4-209ENST00000465132 FSBPO95073 299 aa17.68■□□□□ 0.42
CPSF4-209ENST00000465132 ATXN1LP0C7T5 689 aaKnown RBP17.68■□□□□ 0.42
CPSF4-209ENST00000465132 CES1P23141 567 aa17.68■□□□□ 0.42
CPSF4-209ENST00000465132 CD27P26842 260 aa17.68■□□□□ 0.42
CPSF4-209ENST00000465132 ATP5OP48047 213 aa17.68■□□□□ 0.42
CPSF4-209ENST00000465132 GRIA4P48058 902 aa17.68■□□□□ 0.42
CPSF4-209ENST00000465132 RAD51Q06609 339 aa17.68■□□□□ 0.42
CPSF4-209ENST00000465132 AP1B1Q10567 949 aa17.68■□□□□ 0.42
CPSF4-209ENST00000465132 KLF1Q13351 362 aaPredicted RBP17.68■□□□□ 0.42
CPSF4-209ENST00000465132 COL9A2Q14055 689 aaPredicted RBP17.68■□□□□ 0.42
CPSF4-209ENST00000465132 ZNF235Q14590 738 aa17.68■□□□□ 0.42
CPSF4-209ENST00000465132 SUZ12Q15022 739 aaKnown RBP17.68■□□□□ 0.42
CPSF4-209ENST00000465132 NOMO1Q15155 1222 aa17.68■□□□□ 0.42
CPSF4-209ENST00000465132 TTC31Q49AM3 519 aaPredicted RBP17.68■□□□□ 0.42
CPSF4-209ENST00000465132 ACCSLQ4AC99 568 aa17.68■□□□□ 0.42
CPSF4-209ENST00000465132 ZNF776Q68DI1 518 aaPredicted RBP17.68■□□□□ 0.42
CPSF4-209ENST00000465132 DSG4Q86SJ6 1040 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms