RNA–Protein interactions for RNA: ENST00000464313.1

PTPN12-210, Transcript of protein tyrosine phosphatase, non-receptor type 12, human

TSL 4

Gene PTPN12, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN12-210	ENST00000464313	ZNF333	Q96JL9	665 aa		4.28	□□□□□ -1.72
PTPN12-210	ENST00000464313	NR1H4	Q96RI1	486 aa	Predicted RBP	4.28	□□□□□ -1.72
PTPN12-210	ENST00000464313	MPP6	Q9NZW5	540 aa		4.28	□□□□□ -1.72
PTPN12-210	ENST00000464313	AASS	Q9UDR5	926 aa		4.28	□□□□□ -1.72
PTPN12-210	ENST00000464313	PNMA2	Q9UL42	364 aa		4.28	□□□□□ -1.72
PTPN12-210	ENST00000464313	INSL5	Q9Y5Q6	135 aa		4.28	□□□□□ -1.72
PTPN12-210	ENST00000464313	SQOR	Q9Y6N5	450 aa		4.28	□□□□□ -1.72
PTPN12-210	ENST00000464313	KDM3A	Q9Y4C1	1321 aa		4.27	□□□□□ -1.73
PTPN12-210	ENST00000464313		A0A1W2PQM1	296 aa		4.27	□□□□□ -1.73
PTPN12-210	ENST00000464313	TYW5	A2RUC4	315 aa	Known RBP	4.27	□□□□□ -1.73
PTPN12-210	ENST00000464313	GAGE12J	A6NER3	117 aa		4.27	□□□□□ -1.73
PTPN12-210	ENST00000464313	BECN2	A8MW95	431 aa		4.27	□□□□□ -1.73
PTPN12-210	ENST00000464313		B4DGG1	531 aa		4.27	□□□□□ -1.73
PTPN12-210	ENST00000464313	EBAG9	O00559	213 aa		4.27	□□□□□ -1.73
PTPN12-210	ENST00000464313	TGFB1I1	O43294	461 aa		4.27	□□□□□ -1.73
PTPN12-210	ENST00000464313	LDB2	O43679	373 aa		4.27	□□□□□ -1.73
PTPN12-210	ENST00000464313	KIF1C	O43896	1103 aa	Known RBP	4.27	□□□□□ -1.73
PTPN12-210	ENST00000464313	SRD5A1	P18405	259 aa		4.27	□□□□□ -1.73
PTPN12-210	ENST00000464313	ICAM3	P32942	547 aa		4.27	□□□□□ -1.73
PTPN12-210	ENST00000464313	POLD2	P49005	469 aa		4.27	□□□□□ -1.73
PTPN12-210	ENST00000464313	CTCF	P49711	727 aa	Predicted RBP	4.27	□□□□□ -1.73
PTPN12-210	ENST00000464313	PMS2	P54278	862 aa		4.27	□□□□□ -1.73
PTPN12-210	ENST00000464313	GEMIN4	P57678	1058 aa	Known RBP	4.27	□□□□□ -1.73
PTPN12-210	ENST00000464313	GRIK3	Q13003	919 aa		4.27	□□□□□ -1.73
PTPN12-210	ENST00000464313	GPR18	Q14330	331 aa		4.27	□□□□□ -1.73
PTPN12-210	ENST00000464313	VEPH1	Q14D04	833 aa		4.27	□□□□□ -1.73
PTPN12-210	ENST00000464313	TBCE	Q15813	527 aa	Predicted RBP	4.27	□□□□□ -1.73
PTPN12-210	ENST00000464313	LEXM	Q3ZCV2	418 aa		4.27	□□□□□ -1.73
PTPN12-210	ENST00000464313	DCAF12L2	Q5VW00	463 aa		4.27	□□□□□ -1.73
PTPN12-210	ENST00000464313	FAAH2	Q6GMR7	532 aa		4.27	□□□□□ -1.73
PTPN12-210	ENST00000464313	ATF7IP	Q6VMQ6	1270 aa		4.27	□□□□□ -1.73
PTPN12-210	ENST00000464313		Q6ZSV7	163 aa		4.27	□□□□□ -1.73
PTPN12-210	ENST00000464313	TBC1D26	Q86UD7	250 aa		4.27	□□□□□ -1.73
PTPN12-210	ENST00000464313	NOXA1	Q86UR1	476 aa		4.27	□□□□□ -1.73
PTPN12-210	ENST00000464313	PIM3	Q86V86	326 aa		4.27	□□□□□ -1.73
PTPN12-210	ENST00000464313	TDRP	Q86YL5	185 aa		4.27	□□□□□ -1.73
PTPN12-210	ENST00000464313	DHX40	Q8IX18	779 aa	Known RBP	4.27	□□□□□ -1.73
PTPN12-210	ENST00000464313	C11orf65	Q8NCR3	313 aa		4.27	□□□□□ -1.73
PTPN12-210	ENST00000464313	MCPH1	Q8NEM0	835 aa		4.27	□□□□□ -1.73
PTPN12-210	ENST00000464313	PPHLN1	Q8NEY8	458 aa	Known RBP	4.27	□□□□□ -1.73
PTPN12-210	ENST00000464313	CADM4	Q8NFZ8	388 aa		4.27	□□□□□ -1.73
PTPN12-210	ENST00000464313	TDRD7	Q8NHU6	1098 aa	Known RBP	4.27	□□□□□ -1.73
PTPN12-210	ENST00000464313	BICD2	Q8TD16	824 aa		4.27	□□□□□ -1.73
PTPN12-210	ENST00000464313	ASB5	Q8WWX0	329 aa		4.27	□□□□□ -1.73
PTPN12-210	ENST00000464313	SKA1	Q96BD8	255 aa		4.27	□□□□□ -1.73
PTPN12-210	ENST00000464313	ZC3HAV1L	Q96H79	300 aa	Known RBP	4.27	□□□□□ -1.73
PTPN12-210	ENST00000464313	URB1-AS1	Q96HZ7	61 aa		4.27	□□□□□ -1.73
PTPN12-210	ENST00000464313	PIP5K1A	Q99755	562 aa		4.27	□□□□□ -1.73
PTPN12-210	ENST00000464313	MAF1	Q9H063	256 aa		4.27	□□□□□ -1.73
PTPN12-210	ENST00000464313	FAM234A	Q9H0X4	552 aa		4.27	□□□□□ -1.73
PTPN12-210	ENST00000464313	KRCC1	Q9NPI7	259 aa	Predicted RBP	4.27	□□□□□ -1.73
PTPN12-210	ENST00000464313	SPATS2L	Q9NUQ6	558 aa	Known RBP	4.27	□□□□□ -1.73
PTPN12-210	ENST00000464313	TAS2R10	Q9NYW0	307 aa		4.27	□□□□□ -1.73
PTPN12-210	ENST00000464313	NCKIPSD	Q9NZQ3	722 aa		4.27	□□□□□ -1.73
PTPN12-210	ENST00000464313	NPIPB15	A6NHN6	443 aa	Predicted RBP	4.26	□□□□□ -1.73
PTPN12-210	ENST00000464313	KLRF2	D3W0D1	207 aa		4.26	□□□□□ -1.73
PTPN12-210	ENST00000464313	NPIPB11	E5RHQ5	1161 aa		4.26	□□□□□ -1.73
PTPN12-210	ENST00000464313	TNFRSF13B	O14836	293 aa	Predicted RBP	4.26	□□□□□ -1.73
PTPN12-210	ENST00000464313	SEC31A	O94979	1220 aa	Known RBP	4.26	□□□□□ -1.73
PTPN12-210	ENST00000464313	TOMM40	O96008	361 aa		4.26	□□□□□ -1.73
PTPN12-210	ENST00000464313	HEXA	P06865	529 aa		4.26	□□□□□ -1.73
PTPN12-210	ENST00000464313	MMP3	P08254	477 aa		4.26	□□□□□ -1.73
PTPN12-210	ENST00000464313	MYZAP	P0CAP1	466 aa		4.26	□□□□□ -1.73
PTPN12-210	ENST00000464313	SNHG28	P0DPA3	235 aa		4.26	□□□□□ -1.73
PTPN12-210	ENST00000464313	UBL4A	P11441	157 aa		4.26	□□□□□ -1.73
PTPN12-210	ENST00000464313	ENO3	P13929	434 aa	Predicted RBP	4.26	□□□□□ -1.73
PTPN12-210	ENST00000464313	DDIT3	P35638	169 aa		4.26	□□□□□ -1.73
PTPN12-210	ENST00000464313	POLG	P54098	1239 aa	Predicted RBP	4.26	□□□□□ -1.73
PTPN12-210	ENST00000464313	DCTN2	Q13561	401 aa	Known RBP	4.26	□□□□□ -1.73
PTPN12-210	ENST00000464313	SIM2	Q14190	667 aa	Predicted RBP	4.26	□□□□□ -1.73
PTPN12-210	ENST00000464313	KRT32	Q14532	448 aa		4.26	□□□□□ -1.73
PTPN12-210	ENST00000464313	HNF4G	Q14541	408 aa		4.26	□□□□□ -1.73
PTPN12-210	ENST00000464313	RNPS1	Q15287	305 aa	Known RBP	4.26	□□□□□ -1.73
PTPN12-210	ENST00000464313	PRAMEF19	Q5SWL8	479 aa		4.26	□□□□□ -1.73
PTPN12-210	ENST00000464313	GPATCH4	Q5T3I0	446 aa	Known RBP	4.26	□□□□□ -1.73
PTPN12-210	ENST00000464313	INO80C	Q6PI98	192 aa	Predicted RBP	4.26	□□□□□ -1.73
PTPN12-210	ENST00000464313	C1orf122	Q6ZSJ8	110 aa		4.26	□□□□□ -1.73
PTPN12-210	ENST00000464313	TBC1D1	Q86TI0	1168 aa	Predicted RBP	4.26	□□□□□ -1.73
PTPN12-210	ENST00000464313	DENND6A	Q8IWF6	608 aa		4.26	□□□□□ -1.73
PTPN12-210	ENST00000464313	SAMD14	Q8IZD0	417 aa	Predicted RBP	4.26	□□□□□ -1.73
PTPN12-210	ENST00000464313	ZMIZ2	Q8NF64	920 aa		4.26	□□□□□ -1.73
PTPN12-210	ENST00000464313	GJC3	Q8NFK1	279 aa		4.26	□□□□□ -1.73
PTPN12-210	ENST00000464313	ADAMTS15	Q8TE58	950 aa		4.26	□□□□□ -1.73
PTPN12-210	ENST00000464313	SLC35F5	Q8WV83	523 aa		4.26	□□□□□ -1.73
PTPN12-210	ENST00000464313	PERP	Q96FX8	193 aa		4.26	□□□□□ -1.73
PTPN12-210	ENST00000464313	HMCES	Q96FZ2	354 aa		4.26	□□□□□ -1.73
PTPN12-210	ENST00000464313	VCPIP1	Q96JH7	1222 aa		4.26	□□□□□ -1.73
PTPN12-210	ENST00000464313	C7orf26	Q96N11	449 aa		4.26	□□□□□ -1.73
PTPN12-210	ENST00000464313	BBS4	Q96RK4	519 aa		4.26	□□□□□ -1.73
PTPN12-210	ENST00000464313	MSTO1	Q9BUK6	570 aa		4.26	□□□□□ -1.73
PTPN12-210	ENST00000464313	PLAC1	Q9HBJ0	212 aa		4.26	□□□□□ -1.73
PTPN12-210	ENST00000464313	OLA1	Q9NTK5	396 aa	Known RBP	4.26	□□□□□ -1.73
PTPN12-210	ENST00000464313	ORC3	Q9UBD5	711 aa	Predicted RBP	4.26	□□□□□ -1.73
PTPN12-210	ENST00000464313	MKLN1	Q9UL63	735 aa		4.26	□□□□□ -1.73
PTPN12-210	ENST00000464313	RAI2	Q9Y5P3	530 aa		4.26	□□□□□ -1.73
PTPN12-210	ENST00000464313		A0A0U1RQF3	1178 aa		4.25	□□□□□ -1.73
PTPN12-210	ENST00000464313	BCAT2	O15382	392 aa	Predicted RBP	4.25	□□□□□ -1.73
PTPN12-210	ENST00000464313	INSIG1	O15503	277 aa		4.25	□□□□□ -1.73
PTPN12-210	ENST00000464313	RGS11	O94810	467 aa		4.25	□□□□□ -1.73
PTPN12-210	ENST00000464313	LCAT	P04180	440 aa		4.25	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms