RNA–Protein interactions for RNA: ENST00000463688.6

COMMD3-205, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 1,407 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-205ENST00000463688 CD160O95971 181 aa13.6□□□□□ -0.23
COMMD3-205ENST00000463688 HTR1BP28222 390 aa13.6□□□□□ -0.23
COMMD3-205ENST00000463688 MAN1A1P33908 653 aa13.6□□□□□ -0.23
COMMD3-205ENST00000463688 PEX5P50542 639 aa13.6□□□□□ -0.23
COMMD3-205ENST00000463688 THOP1P52888 689 aa13.6□□□□□ -0.23
COMMD3-205ENST00000463688 ZNF211Q13398 564 aaPredicted RBP13.6□□□□□ -0.23
COMMD3-205ENST00000463688 ZNF235Q14590 738 aa13.6□□□□□ -0.23
COMMD3-205ENST00000463688 UNQ6494/PRO21346Q6UXR6 183 aa13.6□□□□□ -0.23
COMMD3-205ENST00000463688 PARS2Q7L3T8 475 aaKnown RBP13.6□□□□□ -0.23
COMMD3-205ENST00000463688 BAHD1Q8TBE0 780 aaPredicted RBP13.6□□□□□ -0.23
COMMD3-205ENST00000463688 ZNF564Q8TBZ8 553 aaPredicted RBP13.6□□□□□ -0.23
COMMD3-205ENST00000463688 SCG3Q8WXD2 468 aaKnown RBP13.6□□□□□ -0.23
COMMD3-205ENST00000463688 PSKH2Q96QS6 385 aa13.6□□□□□ -0.23
COMMD3-205ENST00000463688 DNAJC7Q99615 494 aa13.6□□□□□ -0.23
COMMD3-205ENST00000463688 EBF2Q9HAK2 575 aa13.6□□□□□ -0.23
COMMD3-205ENST00000463688 AMACRQ9UHK6 382 aa13.6□□□□□ -0.23
COMMD3-205ENST00000463688 DNPEPQ9ULA0 475 aa13.6□□□□□ -0.23
COMMD3-205ENST00000463688 INTUQ9ULD6 942 aa13.6□□□□□ -0.23
COMMD3-205ENST00000463688 CSNK1G3Q9Y6M4 447 aa13.6□□□□□ -0.23
COMMD3-205ENST00000463688 TNRC6BQ9UPQ9 1833 aaKnown RBP13.6□□□□□ -0.23
COMMD3-205ENST00000463688 PCDH15Q96QU1 1955 aa13.59□□□□□ -0.23
COMMD3-205ENST00000463688 A0A087X0T9 212 aa13.59□□□□□ -0.23
COMMD3-205ENST00000463688 ENC1O14682 589 aa13.59□□□□□ -0.23
COMMD3-205ENST00000463688 AREL1O15033 823 aa13.59□□□□□ -0.23
COMMD3-205ENST00000463688 ATMINO43313 823 aaPredicted RBP13.59□□□□□ -0.23
COMMD3-205ENST00000463688 PAK4O96013 591 aaPredicted RBP13.59□□□□□ -0.23
COMMD3-205ENST00000463688 FAM228BP0C875 321 aa13.59□□□□□ -0.23
COMMD3-205ENST00000463688 CKMT2P17540 419 aa13.59□□□□□ -0.23
COMMD3-205ENST00000463688 KELP23276 732 aa13.59□□□□□ -0.23
COMMD3-205ENST00000463688 RPIAP49247 311 aa13.59□□□□□ -0.23
COMMD3-205ENST00000463688 PEX6Q13608 980 aa13.59□□□□□ -0.23
COMMD3-205ENST00000463688 DPYSQ14117 519 aa13.59□□□□□ -0.23
COMMD3-205ENST00000463688 UGP2Q16851 508 aa13.59□□□□□ -0.23
COMMD3-205ENST00000463688 RAB6CQ53S08 254 aa13.59□□□□□ -0.23
COMMD3-205ENST00000463688 ZFYVE27Q5T4F4 411 aa13.59□□□□□ -0.23
COMMD3-205ENST00000463688 AFMIDQ63HM1 303 aa13.59□□□□□ -0.23
COMMD3-205ENST00000463688 Q6ZSR6 202 aa13.59□□□□□ -0.23
COMMD3-205ENST00000463688 POLNQ7Z5Q5 900 aa13.59□□□□□ -0.23
COMMD3-205ENST00000463688 PTAR1Q7Z6K3 402 aaPredicted RBP13.59□□□□□ -0.23
COMMD3-205ENST00000463688 SRLQ86TD4 932 aa13.59□□□□□ -0.23
COMMD3-205ENST00000463688 PARGQ86W56 976 aa13.59□□□□□ -0.23
COMMD3-205ENST00000463688 VSIG1Q86XK7 387 aa13.59□□□□□ -0.23
COMMD3-205ENST00000463688 CACTIN-AS1Q8N1I8 211 aa13.59□□□□□ -0.23
COMMD3-205ENST00000463688 ATPAF2Q8N5M1 289 aa13.59□□□□□ -0.23
COMMD3-205ENST00000463688 KCTD6Q8NC69 237 aa13.59□□□□□ -0.23
COMMD3-205ENST00000463688 SPOCK2Q92563 424 aa13.59□□□□□ -0.23
COMMD3-205ENST00000463688 HSPH1Q92598 858 aa13.59□□□□□ -0.23
COMMD3-205ENST00000463688 CNDP2Q96KP4 475 aaKnown RBP13.59□□□□□ -0.23
COMMD3-205ENST00000463688 KCTD15Q96SI1 283 aaPredicted RBP13.59□□□□□ -0.23
COMMD3-205ENST00000463688 ZNF670Q9BS34 389 aa13.59□□□□□ -0.23
COMMD3-205ENST00000463688 CALN1Q9BXU9 219 aa13.59□□□□□ -0.23
COMMD3-205ENST00000463688 SLC39A8Q9C0K1 460 aa13.59□□□□□ -0.23
COMMD3-205ENST00000463688 RAB6CQ9H0N0 254 aa13.59□□□□□ -0.23
COMMD3-205ENST00000463688 NOL6Q9H6R4 1146 aaKnown RBP13.59□□□□□ -0.23
COMMD3-205ENST00000463688 CWC15Q9P013 229 aaKnown RBP13.59□□□□□ -0.23
COMMD3-205ENST00000463688 CEP295Q9C0D2 2601 aa13.59□□□□□ -0.23
COMMD3-205ENST00000463688 CEP192Q8TEP8 1941 aa13.58□□□□□ -0.24
COMMD3-205ENST00000463688 TSPAN11A1L157 253 aa13.58□□□□□ -0.24
COMMD3-205ENST00000463688 PLK4O00444 970 aa13.58□□□□□ -0.24
COMMD3-205ENST00000463688 IPO7O95373 1038 aaKnown RBP13.58□□□□□ -0.24
COMMD3-205ENST00000463688 WNT1P04628 370 aa13.58□□□□□ -0.24
COMMD3-205ENST00000463688 TMEM253P0C7T8 217 aa13.58□□□□□ -0.24
COMMD3-205ENST00000463688 PRLRP16471 622 aa13.58□□□□□ -0.24
COMMD3-205ENST00000463688 ZFXP17010 805 aaPredicted RBP13.58□□□□□ -0.24
COMMD3-205ENST00000463688 SLC1A1P43005 524 aa13.58□□□□□ -0.24
COMMD3-205ENST00000463688 METAP1P53582 386 aa13.58□□□□□ -0.24
COMMD3-205ENST00000463688 LBRQ14739 615 aaKnown RBP13.58□□□□□ -0.24
COMMD3-205ENST00000463688 CYTH1Q15438 398 aa13.58□□□□□ -0.24
COMMD3-205ENST00000463688 TMEM52BQ4KMG9 183 aa13.58□□□□□ -0.24
COMMD3-205ENST00000463688 MARC1Q5VT66 337 aa13.58□□□□□ -0.24
COMMD3-205ENST00000463688 E4F1Q66K89 784 aaPredicted RBP13.58□□□□□ -0.24
COMMD3-205ENST00000463688 BZW1Q7L1Q6 419 aaKnown RBP13.58□□□□□ -0.24
COMMD3-205ENST00000463688 VSTM4Q8IW00 320 aa13.58□□□□□ -0.24
COMMD3-205ENST00000463688 KDF1Q8NAX2 398 aaPredicted RBP13.58□□□□□ -0.24
COMMD3-205ENST00000463688 OR6K2Q8NGY2 324 aa13.58□□□□□ -0.24
COMMD3-205ENST00000463688 FATE1Q969F0 183 aa13.58□□□□□ -0.24
COMMD3-205ENST00000463688 CAMK1GQ96NX5 476 aa13.58□□□□□ -0.24
COMMD3-205ENST00000463688 CSPG4P5Q96PW8 444 aa13.58□□□□□ -0.24
COMMD3-205ENST00000463688 MAK16Q9BXY0 300 aaKnown RBP13.58□□□□□ -0.24
COMMD3-205ENST00000463688 PDFQ9HBH1 243 aa13.58□□□□□ -0.24
COMMD3-205ENST00000463688 NUMA1Q14980 2115 aa13.58□□□□□ -0.24
COMMD3-205ENST00000463688 IGLON5A6NGN9 336 aa13.57□□□□□ -0.24
COMMD3-205ENST00000463688 ZNF487B1APH4 448 aa13.57□□□□□ -0.24
COMMD3-205ENST00000463688 AKR1B15C9JRZ8 316 aaPredicted RBP13.57□□□□□ -0.24
COMMD3-205ENST00000463688 TPP1O14773 563 aa13.57□□□□□ -0.24
COMMD3-205ENST00000463688 HYAL3O43820 417 aaPredicted RBP13.57□□□□□ -0.24
COMMD3-205ENST00000463688 LZTS3O60299 673 aaPredicted RBP13.57□□□□□ -0.24
COMMD3-205ENST00000463688 RFPL3O75679 317 aa13.57□□□□□ -0.24
COMMD3-205ENST00000463688 PROSCO94903 275 aa13.57□□□□□ -0.24
COMMD3-205ENST00000463688 CSF2P04141 144 aa13.57□□□□□ -0.24
COMMD3-205ENST00000463688 RARAP10276 462 aa13.57□□□□□ -0.24
COMMD3-205ENST00000463688 EIF4A3P38919 411 aaKnown RBP13.57□□□□□ -0.24
COMMD3-205ENST00000463688 LRRC14Q15048 493 aa13.57□□□□□ -0.24
COMMD3-205ENST00000463688 AGERQ15109 404 aa13.57□□□□□ -0.24
COMMD3-205ENST00000463688 ATXN7L2Q5T6C5 722 aaPredicted RBP13.57□□□□□ -0.24
COMMD3-205ENST00000463688 SEL1L3Q68CR1 1132 aa13.57□□□□□ -0.24
COMMD3-205ENST00000463688 TMPRSS7Q7RTY8 843 aa13.57□□□□□ -0.24
COMMD3-205ENST00000463688 TXLNBQ8N3L3 684 aa13.57□□□□□ -0.24
COMMD3-205ENST00000463688 CHCHD4Q8N4Q1 142 aa13.57□□□□□ -0.24
COMMD3-205ENST00000463688 TPCN2Q8NHX9 752 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms