RNA–Protein interactions for RNA: ENST00000463487.1

COL9A3-204, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-204ENST00000463487 RABEPKQ7Z6M1 372 aa20.01■□□□□ 0.79
COL9A3-204ENST00000463487 TBC1D3Q8IZP1 549 aaPredicted RBP20.01■□□□□ 0.79
COL9A3-204ENST00000463487 HTR3CQ8WXA8 447 aa20.01■□□□□ 0.79
COL9A3-204ENST00000463487 FAM122AQ96E09 287 aa20.01■□□□□ 0.79
COL9A3-204ENST00000463487 ZNF419Q96HQ0 510 aaPredicted RBP20.01■□□□□ 0.79
COL9A3-204ENST00000463487 SEMA3CQ99985 751 aa20.01■□□□□ 0.79
COL9A3-204ENST00000463487 HINFPQ9BQA5 517 aa20.01■□□□□ 0.79
COL9A3-204ENST00000463487 METTL12A8MUP2 240 aa20■□□□□ 0.79
COL9A3-204ENST00000463487 AP1G1O43747 822 aa20■□□□□ 0.79
COL9A3-204ENST00000463487 PIGNO95427 931 aa20■□□□□ 0.79
COL9A3-204ENST00000463487 RBP3P10745 1247 aa20■□□□□ 0.79
COL9A3-204ENST00000463487 CR2P20023 1033 aa20■□□□□ 0.79
COL9A3-204ENST00000463487 HOXD12P35452 270 aa20■□□□□ 0.79
COL9A3-204ENST00000463487 METAP1P53582 386 aa20■□□□□ 0.79
COL9A3-204ENST00000463487 ELP6Q0PNE2 266 aa20■□□□□ 0.79
COL9A3-204ENST00000463487 KLF1Q13351 362 aaPredicted RBP20■□□□□ 0.79
COL9A3-204ENST00000463487 KIAA0895LQ68EN5 471 aa20■□□□□ 0.79
COL9A3-204ENST00000463487 ERAP2Q6P179 960 aa20■□□□□ 0.79
COL9A3-204ENST00000463487 DARS2Q6PI48 645 aaKnown RBP20■□□□□ 0.79
COL9A3-204ENST00000463487 PARS2Q7L3T8 475 aaKnown RBP20■□□□□ 0.79
COL9A3-204ENST00000463487 TTC7BQ86TV6 843 aa20■□□□□ 0.79
COL9A3-204ENST00000463487 CAMK1DQ8IU85 385 aa20■□□□□ 0.79
COL9A3-204ENST00000463487 RGL4Q8IZJ4 473 aa20■□□□□ 0.79
COL9A3-204ENST00000463487 NDUFAF2Q8N183 169 aa20■□□□□ 0.79
COL9A3-204ENST00000463487 SLC35F6Q8N357 371 aa20■□□□□ 0.79
COL9A3-204ENST00000463487 PGBD5Q8N414 524 aa20■□□□□ 0.79
COL9A3-204ENST00000463487 SNX19Q92543 992 aa20■□□□□ 0.79
COL9A3-204ENST00000463487 RUBCNQ92622 972 aa20■□□□□ 0.79
COL9A3-204ENST00000463487 TRIM44Q96DX7 344 aaPredicted RBP20■□□□□ 0.79
COL9A3-204ENST00000463487 NOD2Q9HC29 1040 aa20■□□□□ 0.79
COL9A3-204ENST00000463487 KLHL8Q9P2G9 620 aaPredicted RBP20■□□□□ 0.79
COL9A3-204ENST00000463487 TRHDEQ9UKU6 1024 aa20■□□□□ 0.79
COL9A3-204ENST00000463487 ATP8A1Q9Y2Q0 1164 aa20■□□□□ 0.79
COL9A3-204ENST00000463487 THADAQ6YHU6 1953 aa20■□□□□ 0.79
COL9A3-204ENST00000463487 PRR23AA6NEV1 266 aa19.99■□□□□ 0.79
COL9A3-204ENST00000463487 PLK4O00444 970 aa19.99■□□□□ 0.79
COL9A3-204ENST00000463487 EPN2O95208 641 aa19.99■□□□□ 0.79
COL9A3-204ENST00000463487 HLA-DQB2P05538 268 aa19.99■□□□□ 0.79
COL9A3-204ENST00000463487 NUDT1P36639 197 aa19.99■□□□□ 0.79
COL9A3-204ENST00000463487 CCR5P51681 352 aa19.99■□□□□ 0.79
COL9A3-204ENST00000463487 CREB5Q02930 508 aa19.99■□□□□ 0.79
COL9A3-204ENST00000463487 ZBTB17Q13105 803 aa19.99■□□□□ 0.79
COL9A3-204ENST00000463487 TEX44Q53QW1 395 aa19.99■□□□□ 0.79
COL9A3-204ENST00000463487 ARMCX6Q7L4S7 300 aa19.99■□□□□ 0.79
COL9A3-204ENST00000463487 SLC13A5Q86YT5 568 aaPredicted RBP19.99■□□□□ 0.79
COL9A3-204ENST00000463487 DEFB119Q8N690 84 aa19.99■□□□□ 0.79
COL9A3-204ENST00000463487 PDCD6IPQ8WUM4 868 aaKnown RBP19.99■□□□□ 0.79
COL9A3-204ENST00000463487 LRRN4Q8WUT4 740 aa19.99■□□□□ 0.79
COL9A3-204ENST00000463487 PBKQ96KB5 322 aa19.99■□□□□ 0.79
COL9A3-204ENST00000463487 AGAP3Q96P47 875 aa19.99■□□□□ 0.79
COL9A3-204ENST00000463487 NAP1L3Q99457 506 aaPredicted RBP19.99■□□□□ 0.79
COL9A3-204ENST00000463487 HERPUD2Q9BSE4 406 aa19.99■□□□□ 0.79
COL9A3-204ENST00000463487 KCND1Q9NSA2 647 aa19.99■□□□□ 0.79
COL9A3-204ENST00000463487 SUSD2Q9UGT4 822 aa19.99■□□□□ 0.79
COL9A3-204ENST00000463487 TSPAN11A1L157 253 aa19.98■□□□□ 0.79
COL9A3-204ENST00000463487 USP27XA6NNY8 438 aa19.98■□□□□ 0.79
COL9A3-204ENST00000463487 UPK3BL1B0FP48 263 aa19.98■□□□□ 0.79
COL9A3-204ENST00000463487 UPK3BL2E5RIL1 263 aa19.98■□□□□ 0.79
COL9A3-204ENST00000463487 RNF103O00237 685 aa19.98■□□□□ 0.79
COL9A3-204ENST00000463487 ENC1O14682 589 aa19.98■□□□□ 0.79
COL9A3-204ENST00000463487 TSPAN6O43657 245 aa19.98■□□□□ 0.79
COL9A3-204ENST00000463487 CEP104O60308 925 aa19.98■□□□□ 0.79
COL9A3-204ENST00000463487 FSBPO95073 299 aa19.98■□□□□ 0.79
COL9A3-204ENST00000463487 PCDH8O95206 1070 aa19.98■□□□□ 0.79
COL9A3-204ENST00000463487 GNSP15586 552 aa19.98■□□□□ 0.79
COL9A3-204ENST00000463487 PTPN3P26045 913 aa19.98■□□□□ 0.79
COL9A3-204ENST00000463487 TNNT3P45378 269 aaPredicted RBP19.98■□□□□ 0.79
COL9A3-204ENST00000463487 GNG11P61952 73 aa19.98■□□□□ 0.79
COL9A3-204ENST00000463487 ARMC12Q5T9G4 340 aa19.98■□□□□ 0.79
COL9A3-204ENST00000463487 KIAA1161Q6NSJ0 714 aa19.98■□□□□ 0.79
COL9A3-204ENST00000463487 SYT12Q8IV01 421 aa19.98■□□□□ 0.79
COL9A3-204ENST00000463487 C6orf106Q9H6K1 298 aaPredicted RBP19.98■□□□□ 0.79
COL9A3-204ENST00000463487 ZKSCAN5Q9Y2L8 839 aa19.98■□□□□ 0.79
COL9A3-204ENST00000463487 ZBTB32Q9Y2Y4 487 aaPredicted RBP19.98■□□□□ 0.79
COL9A3-204ENST00000463487 BCLAF3A2AJT9 711 aaKnown RBP19.97■□□□□ 0.79
COL9A3-204ENST00000463487 CFAP69A5D8W1 941 aa19.97■□□□□ 0.79
COL9A3-204ENST00000463487 FOXD2O60548 495 aaPredicted RBP19.97■□□□□ 0.79
COL9A3-204ENST00000463487 LRP3O75074 770 aa19.97■□□□□ 0.79
COL9A3-204ENST00000463487 PTGER3P43115 390 aa19.97■□□□□ 0.79
COL9A3-204ENST00000463487 DSC2Q02487 901 aa19.97■□□□□ 0.79
COL9A3-204ENST00000463487 UGP2Q16851 508 aa19.97■□□□□ 0.79
COL9A3-204ENST00000463487 ITPRIPL1Q6GPH6 555 aa19.97■□□□□ 0.79
COL9A3-204ENST00000463487 PID1Q7Z2X4 250 aa19.97■□□□□ 0.79
COL9A3-204ENST00000463487 PRPF39Q86UA1 669 aaKnown RBP19.97■□□□□ 0.79
COL9A3-204ENST00000463487 TRIM69Q86WT6 500 aa19.97■□□□□ 0.79
COL9A3-204ENST00000463487 SLC41A1Q8IVJ1 513 aa19.97■□□□□ 0.79
COL9A3-204ENST00000463487 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.97■□□□□ 0.79
COL9A3-204ENST00000463487 CEP76Q8TAP6 659 aa19.97■□□□□ 0.79
COL9A3-204ENST00000463487 PIGKQ92643 395 aa19.97■□□□□ 0.79
COL9A3-204ENST00000463487 ECHDC3Q96DC8 303 aa19.97■□□□□ 0.79
COL9A3-204ENST00000463487 FEM1CQ96JP0 617 aa19.97■□□□□ 0.79
COL9A3-204ENST00000463487 TEKT5Q96M29 485 aa19.97■□□□□ 0.79
COL9A3-204ENST00000463487 PPP1R2P1Q96PQ5 205 aa19.97■□□□□ 0.79
COL9A3-204ENST00000463487 HOMER3Q9NSC5 361 aa19.97■□□□□ 0.79
COL9A3-204ENST00000463487 PCDHGC4Q9Y5F7 938 aa19.97■□□□□ 0.79
COL9A3-204ENST00000463487 FADS3Q9Y5Q0 445 aa19.97■□□□□ 0.79
COL9A3-204ENST00000463487 ABCA7Q8IZY2 2146 aa19.97■□□□□ 0.79
COL9A3-204ENST00000463487 PRR5-ARHGAP8B1AHC4 643 aa19.96■□□□□ 0.79
COL9A3-204ENST00000463487 KCNN4O15554 427 aa19.96■□□□□ 0.79
COL9A3-204ENST00000463487 CPP00450 1065 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms