RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 NEK11Q8NG66 645 aa15.59■□□□□ 0.09
SKA3-204ENST00000462482 CENPIQ92674 756 aaPredicted RBP15.59■□□□□ 0.09
SKA3-204ENST00000462482 CCDC97Q96F63 343 aaPredicted RBP15.59■□□□□ 0.09
SKA3-204ENST00000462482 TBATAQ96M53 351 aa15.59■□□□□ 0.09
SKA3-204ENST00000462482 DPH1Q9BZG8 443 aa15.59■□□□□ 0.09
SKA3-204ENST00000462482 CATSPERBQ9H7T0 1116 aa15.59■□□□□ 0.09
SKA3-204ENST00000462482 GGT7Q9UJ14 662 aa15.59■□□□□ 0.09
SKA3-204ENST00000462482 U3KQA8 63 aa15.59■□□□□ 0.09
SKA3-204ENST00000462482 LAMA5O15230 3695 aa15.58■□□□□ 0.08
SKA3-204ENST00000462482 TMEM110-MUSTN1A8MSY1 372 aa15.58■□□□□ 0.08
SKA3-204ENST00000462482 LMO7DNF2Z398 122 aa15.58■□□□□ 0.08
SKA3-204ENST00000462482 AREL1O15033 823 aa15.58■□□□□ 0.08
SKA3-204ENST00000462482 SPINT1O43278 529 aa15.58■□□□□ 0.08
SKA3-204ENST00000462482 CREB3O43889 395 aa15.58■□□□□ 0.08
SKA3-204ENST00000462482 TCEA3O75764 348 aa15.58■□□□□ 0.08
SKA3-204ENST00000462482 PRB1P04280 392 aa15.58■□□□□ 0.08
SKA3-204ENST00000462482 CTSEP14091 401 aa15.58■□□□□ 0.08
SKA3-204ENST00000462482 CHRNB2P17787 502 aa15.58■□□□□ 0.08
SKA3-204ENST00000462482 HTR1BP28222 390 aa15.58■□□□□ 0.08
SKA3-204ENST00000462482 RFC1P35251 1148 aaPredicted RBP15.58■□□□□ 0.08
SKA3-204ENST00000462482 HDAC4P56524 1084 aa15.58■□□□□ 0.08
SKA3-204ENST00000462482 PPARDQ03181 441 aa15.58■□□□□ 0.08
SKA3-204ENST00000462482 EIF2B5Q13144 721 aaKnown RBP15.58■□□□□ 0.08
SKA3-204ENST00000462482 C1orf61Q13536 156 aa15.58■□□□□ 0.08
SKA3-204ENST00000462482 GRM3Q14832 879 aa15.58■□□□□ 0.08
SKA3-204ENST00000462482 KRT31Q15323 416 aa15.58■□□□□ 0.08
SKA3-204ENST00000462482 PARP15Q460N3 678 aa15.58■□□□□ 0.08
SKA3-204ENST00000462482 RAB6CQ53S08 254 aa15.58■□□□□ 0.08
SKA3-204ENST00000462482 C3orf38Q5JPI3 329 aa15.58■□□□□ 0.08
SKA3-204ENST00000462482 MACC1Q6ZN28 852 aa15.58■□□□□ 0.08
SKA3-204ENST00000462482 FSTL5Q8N475 847 aaPredicted RBP15.58■□□□□ 0.08
SKA3-204ENST00000462482 RTL3Q8N8U3 475 aaKnown RBP15.58■□□□□ 0.08
SKA3-204ENST00000462482 C3orf20Q8ND61 904 aa15.58■□□□□ 0.08
SKA3-204ENST00000462482 ATL2Q8NHH9 583 aa15.58■□□□□ 0.08
SKA3-204ENST00000462482 CENPTQ96BT3 561 aa15.58■□□□□ 0.08
SKA3-204ENST00000462482 HIC2Q96JB3 615 aa15.58■□□□□ 0.08
SKA3-204ENST00000462482 RAB6CQ9H0N0 254 aa15.58■□□□□ 0.08
SKA3-204ENST00000462482 SYNDIG1Q9H7V2 258 aa15.58■□□□□ 0.08
SKA3-204ENST00000462482 DKK3Q9UBP4 350 aa15.58■□□□□ 0.08
SKA3-204ENST00000462482 KLF15Q9UIH9 416 aa15.58■□□□□ 0.08
SKA3-204ENST00000462482 MFHAS1Q9Y4C4 1052 aa15.58■□□□□ 0.08
SKA3-204ENST00000462482 SIGLEC16A6NMB1 481 aa15.57■□□□□ 0.08
SKA3-204ENST00000462482 RASA4BC9J798 803 aa15.57■□□□□ 0.08
SKA3-204ENST00000462482 ERVH48-1M5A8F1 160 aa15.57■□□□□ 0.08
SKA3-204ENST00000462482 KLK10O43240 276 aa15.57■□□□□ 0.08
SKA3-204ENST00000462482 RASA4O43374 803 aa15.57■□□□□ 0.08
SKA3-204ENST00000462482 GJB6O95452 261 aa15.57■□□□□ 0.08
SKA3-204ENST00000462482 ALPIP09923 528 aa15.57■□□□□ 0.08
SKA3-204ENST00000462482 CCDC172P0C7W6 258 aa15.57■□□□□ 0.08
SKA3-204ENST00000462482 UNGP13051 313 aaPredicted RBP15.57■□□□□ 0.08
SKA3-204ENST00000462482 TGM2P21980 687 aa15.57■□□□□ 0.08
SKA3-204ENST00000462482 EIF4A3P38919 411 aaKnown RBP15.57■□□□□ 0.08
SKA3-204ENST00000462482 KLK7P49862 253 aa15.57■□□□□ 0.08
SKA3-204ENST00000462482 AIF1P55008 147 aa15.57■□□□□ 0.08
SKA3-204ENST00000462482 GSCP56915 257 aaPredicted RBP15.57■□□□□ 0.08
SKA3-204ENST00000462482 JAM2P57087 298 aa15.57■□□□□ 0.08
SKA3-204ENST00000462482 RHDQ02161 417 aa15.57■□□□□ 0.08
SKA3-204ENST00000462482 LRRC14Q15048 493 aa15.57■□□□□ 0.08
SKA3-204ENST00000462482 ELOCQ15369 112 aa15.57■□□□□ 0.08
SKA3-204ENST00000462482 CLEC16AQ2KHT3 1053 aa15.57■□□□□ 0.08
SKA3-204ENST00000462482 KLHL40Q2TBA0 621 aa15.57■□□□□ 0.08
SKA3-204ENST00000462482 LRRC73Q5JTD7 316 aa15.57■□□□□ 0.08
SKA3-204ENST00000462482 C6orf132Q5T0Z8 1188 aa15.57■□□□□ 0.08
SKA3-204ENST00000462482 ERAP2Q6P179 960 aa15.57■□□□□ 0.08
SKA3-204ENST00000462482 FOXR1Q6PIV2 292 aa15.57■□□□□ 0.08
SKA3-204ENST00000462482 WDR59Q6PJI9 974 aa15.57■□□□□ 0.08
SKA3-204ENST00000462482 PHF13Q86YI8 300 aaPredicted RBP15.57■□□□□ 0.08
SKA3-204ENST00000462482 RBFAQ8N0V3 343 aa15.57■□□□□ 0.08
SKA3-204ENST00000462482 ARL14Q8N4G2 192 aa15.57■□□□□ 0.08
SKA3-204ENST00000462482 PAF1Q8N7H5 531 aa15.57■□□□□ 0.08
SKA3-204ENST00000462482 VCPIP1Q96JH7 1222 aa15.57■□□□□ 0.08
SKA3-204ENST00000462482 WRAP53Q9BUR4 548 aaKnown RBP15.57■□□□□ 0.08
SKA3-204ENST00000462482 BOCQ9BWV1 1114 aa15.57■□□□□ 0.08
SKA3-204ENST00000462482 CAAP1Q9H8G2 361 aa15.57■□□□□ 0.08
SKA3-204ENST00000462482 PADI4Q9UM07 663 aa15.57■□□□□ 0.08
SKA3-204ENST00000462482 SATB2Q9UPW6 733 aa15.57■□□□□ 0.08
SKA3-204ENST00000462482 NYNRINQ9P2P1 1898 aaKnown RBP15.57■□□□□ 0.08
SKA3-204ENST00000462482 FGF10O15520 208 aaPredicted RBP15.56■□□□□ 0.08
SKA3-204ENST00000462482 LZTS3O60299 673 aaPredicted RBP15.56■□□□□ 0.08
SKA3-204ENST00000462482 IGFALSP35858 605 aa15.56■□□□□ 0.08
SKA3-204ENST00000462482 PEX5P50542 639 aa15.56■□□□□ 0.08
SKA3-204ENST00000462482 C1QBPQ07021 282 aaKnown RBP15.56■□□□□ 0.08
SKA3-204ENST00000462482 SPIDRQ14159 915 aa15.56■□□□□ 0.08
SKA3-204ENST00000462482 TPRG1LQ5T0D9 272 aa15.56■□□□□ 0.08
SKA3-204ENST00000462482 DCUN1D2Q6PH85 259 aa15.56■□□□□ 0.08
SKA3-204ENST00000462482 IGF2-ASQ6U949 168 aa15.56■□□□□ 0.08
SKA3-204ENST00000462482 CRTC1Q6UUV9 634 aa15.56■□□□□ 0.08
SKA3-204ENST00000462482 ZNF605Q86T29 641 aa15.56■□□□□ 0.08
SKA3-204ENST00000462482 WDR36Q8NI36 951 aaKnown RBP15.56■□□□□ 0.08
SKA3-204ENST00000462482 HCAR2Q8TDS4 363 aa15.56■□□□□ 0.08
SKA3-204ENST00000462482 ATXN7L3BQ96GX2 97 aa15.56■□□□□ 0.08
SKA3-204ENST00000462482 LRRC61Q9BV99 259 aa15.56■□□□□ 0.08
SKA3-204ENST00000462482 CPEB1Q9BZB8 566 aaKnown RBP15.56■□□□□ 0.08
SKA3-204ENST00000462482 GULP1Q9UBP9 304 aa15.56■□□□□ 0.08
SKA3-204ENST00000462482 UBA2Q9UBT2 640 aaPredicted RBP15.56■□□□□ 0.08
SKA3-204ENST00000462482 KNTC1P50748 2209 aa15.56■□□□□ 0.08
SKA3-204ENST00000462482 YY2O15391 372 aa15.55■□□□□ 0.08
SKA3-204ENST00000462482 RASGRP1O95267 797 aa15.55■□□□□ 0.08
SKA3-204ENST00000462482 TIMP2P16035 220 aa15.55■□□□□ 0.08
SKA3-204ENST00000462482 TSHRP16473 764 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms