RNA–Protein interactions for RNA: ENST00000461708.1

SSB-206, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-206ENST00000461708 KDM7AQ6ZMT4 941 aa18.1■□□□□ 0.49
SSB-206ENST00000461708 TTC7BQ86TV6 843 aa18.1■□□□□ 0.49
SSB-206ENST00000461708 TPCN2Q8NHX9 752 aa18.1■□□□□ 0.49
SSB-206ENST00000461708 PCMTD1Q96MG8 357 aaPredicted RBP18.1■□□□□ 0.49
SSB-206ENST00000461708 ZNF578Q96N58 590 aaPredicted RBP18.1■□□□□ 0.49
SSB-206ENST00000461708 AGPAT1Q99943 283 aa18.1■□□□□ 0.49
SSB-206ENST00000461708 KLF15Q9UIH9 416 aa18.1■□□□□ 0.49
SSB-206ENST00000461708 GGT7Q9UJ14 662 aa18.1■□□□□ 0.49
SSB-206ENST00000461708 FZD10Q9ULW2 581 aa18.1■□□□□ 0.49
SSB-206ENST00000461708 ITM2BQ9Y287 266 aa18.1■□□□□ 0.49
SSB-206ENST00000461708 EIF3CLB5ME19 914 aaKnown RBP18.09■□□□□ 0.49
SSB-206ENST00000461708 TK2O00142 265 aa18.09■□□□□ 0.49
SSB-206ENST00000461708 CCP110O43303 1012 aa18.09■□□□□ 0.49
SSB-206ENST00000461708 NEBLO76041 1014 aa18.09■□□□□ 0.49
SSB-206ENST00000461708 LSSP48449 732 aa18.09■□□□□ 0.49
SSB-206ENST00000461708 THOP1P52888 689 aa18.09■□□□□ 0.49
SSB-206ENST00000461708 UBXN1Q04323 297 aa18.09■□□□□ 0.49
SSB-206ENST00000461708 EIF2B5Q13144 721 aaKnown RBP18.09■□□□□ 0.49
SSB-206ENST00000461708 GRM3Q14832 879 aa18.09■□□□□ 0.49
SSB-206ENST00000461708 TPRG1LQ5T0D9 272 aa18.09■□□□□ 0.49
SSB-206ENST00000461708 PYROXD2Q8N2H3 581 aa18.09■□□□□ 0.49
SSB-206ENST00000461708 LSM14AQ8ND56 463 aaKnown RBP18.09■□□□□ 0.49
SSB-206ENST00000461708 CRELD1Q96HD1 420 aa18.09■□□□□ 0.49
SSB-206ENST00000461708 VCPIP1Q96JH7 1222 aa18.09■□□□□ 0.49
SSB-206ENST00000461708 EIF3CQ99613 913 aaKnown RBP18.09■□□□□ 0.49
SSB-206ENST00000461708 ABCG4Q9H172 646 aa18.09■□□□□ 0.49
SSB-206ENST00000461708 CAAP1Q9H8G2 361 aa18.09■□□□□ 0.49
SSB-206ENST00000461708 SPASTQ9UBP0 616 aa18.09■□□□□ 0.49
SSB-206ENST00000461708 EME2A4GXA9 379 aaPredicted RBP18.08■□□□□ 0.48
SSB-206ENST00000461708 RASA4BC9J798 803 aa18.08■□□□□ 0.48
SSB-206ENST00000461708 LMO7DNF2Z398 122 aa18.08■□□□□ 0.48
SSB-206ENST00000461708 RASA4O43374 803 aa18.08■□□□□ 0.48
SSB-206ENST00000461708 TM7SF2O76062 418 aa18.08■□□□□ 0.48
SSB-206ENST00000461708 TIMP2P16035 220 aa18.08■□□□□ 0.48
SSB-206ENST00000461708 FERP16591 822 aa18.08■□□□□ 0.48
SSB-206ENST00000461708 DESP17661 470 aa18.08■□□□□ 0.48
SSB-206ENST00000461708 PEX5P50542 639 aa18.08■□□□□ 0.48
SSB-206ENST00000461708 ERVPABLB-1P60509 514 aa18.08■□□□□ 0.48
SSB-206ENST00000461708 RHOAP61586 193 aa18.08■□□□□ 0.48
SSB-206ENST00000461708 RPL7AP62424 266 aaKnown RBP18.08■□□□□ 0.48
SSB-206ENST00000461708 ELP6Q0PNE2 266 aa18.08■□□□□ 0.48
SSB-206ENST00000461708 STX1AQ16623 288 aa18.08■□□□□ 0.48
SSB-206ENST00000461708 SCYL2Q6P3W7 929 aa18.08■□□□□ 0.48
SSB-206ENST00000461708 IGF2-ASQ6U949 168 aa18.08■□□□□ 0.48
SSB-206ENST00000461708 SASS6Q6UVJ0 657 aa18.08■□□□□ 0.48
SSB-206ENST00000461708 LEKR1Q6ZMV7 388 aa18.08■□□□□ 0.48
SSB-206ENST00000461708 APTXQ7Z2E3 356 aaKnown RBP18.08■□□□□ 0.48
SSB-206ENST00000461708 IFI44Q8TCB0 444 aa18.08■□□□□ 0.48
SSB-206ENST00000461708 MAPK15Q8TD08 544 aa18.08■□□□□ 0.48
SSB-206ENST00000461708 CXorf40AQ8TE69 158 aa18.08■□□□□ 0.48
SSB-206ENST00000461708 HMCESQ96FZ2 354 aa18.08■□□□□ 0.48
SSB-206ENST00000461708 HIC2Q96JB3 615 aa18.08■□□□□ 0.48
SSB-206ENST00000461708 MCEEQ96PE7 176 aa18.08■□□□□ 0.48
SSB-206ENST00000461708 IL12RB2Q99665 862 aa18.08■□□□□ 0.48
SSB-206ENST00000461708 BOCQ9BWV1 1114 aa18.08■□□□□ 0.48
SSB-206ENST00000461708 KLC2Q9H0B6 622 aa18.08■□□□□ 0.48
SSB-206ENST00000461708 MYO6Q9UM54 1294 aa18.08■□□□□ 0.48
SSB-206ENST00000461708 PCDHB1Q9Y5F3 818 aa18.08■□□□□ 0.48
SSB-206ENST00000461708 TSPAN11A1L157 253 aa18.07■□□□□ 0.48
SSB-206ENST00000461708 CSO75390 466 aaKnown RBP18.07■□□□□ 0.48
SSB-206ENST00000461708 IGFALSP35858 605 aa18.07■□□□□ 0.48
SSB-206ENST00000461708 RPIAP49247 311 aa18.07■□□□□ 0.48
SSB-206ENST00000461708 NDST2P52849 883 aa18.07■□□□□ 0.48
SSB-206ENST00000461708 TLE3Q04726 772 aa18.07■□□□□ 0.48
SSB-206ENST00000461708 TMEM52BQ4KMG9 183 aa18.07■□□□□ 0.48
SSB-206ENST00000461708 ACAD10Q6JQN1 1059 aa18.07■□□□□ 0.48
SSB-206ENST00000461708 MACC1Q6ZN28 852 aa18.07■□□□□ 0.48
SSB-206ENST00000461708 ZNF354CQ86Y25 554 aa18.07■□□□□ 0.48
SSB-206ENST00000461708 ZNF248Q8NDW4 579 aa18.07■□□□□ 0.48
SSB-206ENST00000461708 LMX1AQ8TE12 382 aa18.07■□□□□ 0.48
SSB-206ENST00000461708 GLMNQ92990 594 aa18.07■□□□□ 0.48
SSB-206ENST00000461708 POLR1BQ9H9Y6 1135 aa18.07■□□□□ 0.48
SSB-206ENST00000461708 SEPT11Q9NVA2 429 aaKnown RBP18.07■□□□□ 0.48
SSB-206ENST00000461708 LHX3Q9UBR4 397 aa18.07■□□□□ 0.48
SSB-206ENST00000461708 APOBEC3BQ9UH17 382 aaKnown RBP18.07■□□□□ 0.48
SSB-206ENST00000461708 ATMQ13315 3056 aa18.06■□□□□ 0.48
SSB-206ENST00000461708 EIF4E1BA6NMX2 242 aaKnown RBP18.06■□□□□ 0.48
SSB-206ENST00000461708 TMEM110-MUSTN1A8MSY1 372 aa18.06■□□□□ 0.48
SSB-206ENST00000461708 CREB3O43889 395 aa18.06■□□□□ 0.48
SSB-206ENST00000461708 MMP20O60882 483 aa18.06■□□□□ 0.48
SSB-206ENST00000461708 USP12O75317 370 aa18.06■□□□□ 0.48
SSB-206ENST00000461708 TCEA3O75764 348 aa18.06■□□□□ 0.48
SSB-206ENST00000461708 MYF5P13349 255 aa18.06■□□□□ 0.48
SSB-206ENST00000461708 CDK11BP21127 795 aaKnown RBP18.06■□□□□ 0.48
SSB-206ENST00000461708 PCBP4P57723 403 aaKnown RBP18.06■□□□□ 0.48
SSB-206ENST00000461708 AGERQ15109 404 aa18.06■□□□□ 0.48
SSB-206ENST00000461708 CYTH1Q15438 398 aa18.06■□□□□ 0.48
SSB-206ENST00000461708 NR0B2Q15466 257 aa18.06■□□□□ 0.48
SSB-206ENST00000461708 ISXQ2M1V0 245 aa18.06■□□□□ 0.48
SSB-206ENST00000461708 DCUN1D2Q6PH85 259 aa18.06■□□□□ 0.48
SSB-206ENST00000461708 VPS36Q86VN1 386 aa18.06■□□□□ 0.48
SSB-206ENST00000461708 DNAAF5Q86Y56 855 aa18.06■□□□□ 0.48
SSB-206ENST00000461708 PHACTR4Q8IZ21 702 aa18.06■□□□□ 0.48
SSB-206ENST00000461708 MCOLN2Q8IZK6 566 aa18.06■□□□□ 0.48
SSB-206ENST00000461708 SDR16C5Q8N3Y7 309 aa18.06■□□□□ 0.48
SSB-206ENST00000461708 TP53I13Q8NBR0 393 aaPredicted RBP18.06■□□□□ 0.48
SSB-206ENST00000461708 WDR48Q8TAF3 677 aa18.06■□□□□ 0.48
SSB-206ENST00000461708 NAT6Q93015 286 aa18.06■□□□□ 0.48
SSB-206ENST00000461708 ZNF641Q96N77 438 aaPredicted RBP18.06■□□□□ 0.48
SSB-206ENST00000461708 GBP4Q96PP9 640 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms