RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 RGS2P41220 211 aa3.19□□□□□ -1.9
HDAC6-212ENST00000461608 DPP6P42658 865 aa3.19□□□□□ -1.9
HDAC6-212ENST00000461608 RAD52P43351 418 aa3.19□□□□□ -1.9
HDAC6-212ENST00000461608 PROK1P58294 105 aa3.19□□□□□ -1.9
HDAC6-212ENST00000461608 NLRP5P59047 1200 aa3.19□□□□□ -1.9
HDAC6-212ENST00000461608 ZBED6P86452 979 aa3.19□□□□□ -1.9
HDAC6-212ENST00000461608 CREB5Q02930 508 aa3.19□□□□□ -1.9
HDAC6-212ENST00000461608 SLC18A2Q05940 514 aa3.19□□□□□ -1.9
HDAC6-212ENST00000461608 TMEM115Q12893 351 aaPredicted RBP3.19□□□□□ -1.9
HDAC6-212ENST00000461608 PPP2R5BQ15173 497 aa3.19□□□□□ -1.9
HDAC6-212ENST00000461608 TCTN1Q2MV58 587 aa3.19□□□□□ -1.9
HDAC6-212ENST00000461608 TMEM119Q4V9L6 283 aa3.19□□□□□ -1.9
HDAC6-212ENST00000461608 SYTL3Q4VX76 610 aa3.19□□□□□ -1.9
HDAC6-212ENST00000461608 PLEKHO1Q53GL0 409 aaPredicted RBP3.19□□□□□ -1.9
HDAC6-212ENST00000461608 C6orf141Q5SZD1 244 aa3.19□□□□□ -1.9
HDAC6-212ENST00000461608 PAPD7Q5XG87 772 aaKnown RBP3.19□□□□□ -1.9
HDAC6-212ENST00000461608 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.19□□□□□ -1.9
HDAC6-212ENST00000461608 HMBOX1Q6NT76 420 aa3.19□□□□□ -1.9
HDAC6-212ENST00000461608 FBXO42Q6P3S6 717 aa3.19□□□□□ -1.9
HDAC6-212ENST00000461608 FAM83HQ6ZRV2 1179 aaPredicted RBP3.19□□□□□ -1.9
HDAC6-212ENST00000461608 IKBIPQ70UQ0 350 aa3.19□□□□□ -1.9
HDAC6-212ENST00000461608 KRT74Q7RTS7 529 aa3.19□□□□□ -1.9
HDAC6-212ENST00000461608 GPAT4Q86UL3 456 aa3.19□□□□□ -1.9
HDAC6-212ENST00000461608 DENND6AQ8IWF6 608 aa3.19□□□□□ -1.9
HDAC6-212ENST00000461608 CNTROBQ8N137 903 aa3.19□□□□□ -1.9
HDAC6-212ENST00000461608 MPLKIPQ8TAP9 179 aa3.19□□□□□ -1.9
HDAC6-212ENST00000461608 TMEM163Q8TC26 289 aa3.19□□□□□ -1.9
HDAC6-212ENST00000461608 GTF3C6Q969F1 213 aa3.19□□□□□ -1.9
HDAC6-212ENST00000461608 MOAP1Q96BY2 351 aa3.19□□□□□ -1.9
HDAC6-212ENST00000461608 ERP27Q96DN0 273 aa3.19□□□□□ -1.9
HDAC6-212ENST00000461608 ZNF419Q96HQ0 510 aaPredicted RBP3.19□□□□□ -1.9
HDAC6-212ENST00000461608 SERINC2Q96SA4 455 aa3.19□□□□□ -1.9
HDAC6-212ENST00000461608 KAT14Q9H8E8 782 aa3.19□□□□□ -1.9
HDAC6-212ENST00000461608 ZNF304Q9HCX3 659 aa3.19□□□□□ -1.9
HDAC6-212ENST00000461608 SEPT11Q9NVA2 429 aaKnown RBP3.19□□□□□ -1.9
HDAC6-212ENST00000461608 TMEM45AQ9NWC5 275 aa3.19□□□□□ -1.9
HDAC6-212ENST00000461608 NLKQ9UBE8 527 aa3.19□□□□□ -1.9
HDAC6-212ENST00000461608 INTS6Q9UL03 887 aaKnown RBP3.19□□□□□ -1.9
HDAC6-212ENST00000461608 FAM96BQ9Y3D0 163 aa3.19□□□□□ -1.9
HDAC6-212ENST00000461608 SNX8Q9Y5X2 465 aa3.19□□□□□ -1.9
HDAC6-212ENST00000461608 A0A0A0MQY5 61 aa3.18□□□□□ -1.9
HDAC6-212ENST00000461608 TRBV5-3A0A0A0MS03 114 aa3.18□□□□□ -1.9
HDAC6-212ENST00000461608 TYW5A2RUC4 315 aaKnown RBP3.18□□□□□ -1.9
HDAC6-212ENST00000461608 MANSC4A6NHS7 340 aaPredicted RBP3.18□□□□□ -1.9
HDAC6-212ENST00000461608 CDRT15L2A8MXV6 281 aa3.18□□□□□ -1.9
HDAC6-212ENST00000461608 TCERG1O14776 1098 aaKnown RBP3.18□□□□□ -1.9
HDAC6-212ENST00000461608 TGFB1I1O43294 461 aa3.18□□□□□ -1.9
HDAC6-212ENST00000461608 TLX3O43711 291 aaPredicted RBP3.18□□□□□ -1.9
HDAC6-212ENST00000461608 UGDHO60701 494 aa3.18□□□□□ -1.9
HDAC6-212ENST00000461608 HNRNPCL1O60812 293 aaKnown RBP3.18□□□□□ -1.9
HDAC6-212ENST00000461608 MTA2O94776 668 aa3.18□□□□□ -1.9
HDAC6-212ENST00000461608 ACTN1P12814 892 aa3.18□□□□□ -1.9
HDAC6-212ENST00000461608 KRT10P13645 584 aa3.18□□□□□ -1.9
HDAC6-212ENST00000461608 ENO3P13929 434 aaPredicted RBP3.18□□□□□ -1.9
HDAC6-212ENST00000461608 HOXB6P17509 224 aaKnown RBP3.18□□□□□ -1.9
HDAC6-212ENST00000461608 MYF6P23409 242 aa3.18□□□□□ -1.9
HDAC6-212ENST00000461608 ATP5F1P24539 256 aaPredicted RBP3.18□□□□□ -1.9
HDAC6-212ENST00000461608 HOXA13P31271 388 aaPredicted RBP3.18□□□□□ -1.9
HDAC6-212ENST00000461608 ICAM3P32942 547 aa3.18□□□□□ -1.9
HDAC6-212ENST00000461608 RYKP34925 604 aa3.18□□□□□ -1.9
HDAC6-212ENST00000461608 RFC1P35251 1148 aaPredicted RBP3.18□□□□□ -1.9
HDAC6-212ENST00000461608 GNAQP50148 359 aa3.18□□□□□ -1.9
HDAC6-212ENST00000461608 RAD23BP54727 409 aa3.18□□□□□ -1.9
HDAC6-212ENST00000461608 KRTAP10-7P60409 375 aaPredicted RBP3.18□□□□□ -1.9
HDAC6-212ENST00000461608 LRMPQ12912 555 aa3.18□□□□□ -1.9
HDAC6-212ENST00000461608 TOMM20Q15388 145 aa3.18□□□□□ -1.9
HDAC6-212ENST00000461608 PCGF3Q3KNV8 242 aa3.18□□□□□ -1.9
HDAC6-212ENST00000461608 DUSP28Q4G0W2 176 aa3.18□□□□□ -1.9
HDAC6-212ENST00000461608 FBXO43Q4G163 708 aa3.18□□□□□ -1.9
HDAC6-212ENST00000461608 MIDNQ504T8 468 aa3.18□□□□□ -1.9
HDAC6-212ENST00000461608 COLEC12Q5KU26 742 aa3.18□□□□□ -1.9
HDAC6-212ENST00000461608 ENTPD8Q5MY95 495 aa3.18□□□□□ -1.9
HDAC6-212ENST00000461608 C6orf10Q5SRN2 563 aa3.18□□□□□ -1.9
HDAC6-212ENST00000461608 ZNF782Q6ZMW2 699 aaPredicted RBP3.18□□□□□ -1.9
HDAC6-212ENST00000461608 MOB3CQ70IA8 216 aa3.18□□□□□ -1.9
HDAC6-212ENST00000461608 TRAPPC11Q7Z392 1133 aa3.18□□□□□ -1.9
HDAC6-212ENST00000461608 SZRD1Q7Z422 152 aa3.18□□□□□ -1.9
HDAC6-212ENST00000461608 PATL1Q86TB9 770 aaKnown RBP3.18□□□□□ -1.9
HDAC6-212ENST00000461608 PRPF39Q86UA1 669 aaKnown RBP3.18□□□□□ -1.9
HDAC6-212ENST00000461608 ANKRD13BQ86YJ7 626 aa3.18□□□□□ -1.9
HDAC6-212ENST00000461608 SFTPA2Q8IWL1 248 aa3.18□□□□□ -1.9
HDAC6-212ENST00000461608 TAGAPQ8N103 731 aa3.18□□□□□ -1.9
HDAC6-212ENST00000461608 TTC39CQ8N584 583 aa3.18□□□□□ -1.9
HDAC6-212ENST00000461608 SRBD1Q8N5C6 995 aaKnown RBP3.18□□□□□ -1.9
HDAC6-212ENST00000461608 MCPH1Q8NEM0 835 aa3.18□□□□□ -1.9
HDAC6-212ENST00000461608 PSPC1Q8WXF1 523 aaKnown RBP3.18□□□□□ -1.9
HDAC6-212ENST00000461608 SMG7Q92540 1137 aaKnown RBP3.18□□□□□ -1.9
HDAC6-212ENST00000461608 FBXL8Q96CD0 374 aa3.18□□□□□ -1.9
HDAC6-212ENST00000461608 ZC3HAV1LQ96H79 300 aaKnown RBP3.18□□□□□ -1.9
HDAC6-212ENST00000461608 BBS4Q96RK4 519 aa3.18□□□□□ -1.9
HDAC6-212ENST00000461608 SIGLEC11Q96RL6 698 aa3.18□□□□□ -1.9
HDAC6-212ENST00000461608 SIN3AQ96ST3 1273 aa3.18□□□□□ -1.9
HDAC6-212ENST00000461608 LBHD1Q9BQE6 289 aaPredicted RBP3.18□□□□□ -1.9
HDAC6-212ENST00000461608 TRMOQ9BU70 441 aa3.18□□□□□ -1.9
HDAC6-212ENST00000461608 CDT1Q9H211 546 aa3.18□□□□□ -1.9
HDAC6-212ENST00000461608 SMARCAD1Q9H4L7 1026 aa3.18□□□□□ -1.9
HDAC6-212ENST00000461608 SCPEP1Q9HB40 452 aa3.18□□□□□ -1.9
HDAC6-212ENST00000461608 WDR6Q9NNW5 1121 aaKnown RBP3.18□□□□□ -1.9
HDAC6-212ENST00000461608 SPAG4Q9NPE6 437 aa3.18□□□□□ -1.9
HDAC6-212ENST00000461608 NRIP3Q9NQ35 241 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms