RNA–Protein interactions for RNA: ENST00000461540.2

CCT4-203, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

TSL 3

Gene CCT4, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-203ENST00000461540 ELP5Q8TE02 316 aa3.65□□□□□ -1.83
CCT4-203ENST00000461540 CREB3L4Q8TEY5 395 aa3.65□□□□□ -1.83
CCT4-203ENST00000461540 HMGB4Q8WW32 186 aa3.65□□□□□ -1.83
CCT4-203ENST00000461540 JAKMIP2Q96AA8 810 aa3.65□□□□□ -1.83
CCT4-203ENST00000461540 CLMNQ96JQ2 1002 aa3.65□□□□□ -1.83
CCT4-203ENST00000461540 MXD3Q9BW11 206 aa3.65□□□□□ -1.83
CCT4-203ENST00000461540 SIL1Q9H173 461 aa3.65□□□□□ -1.83
CCT4-203ENST00000461540 GRPEL1Q9HAV7 217 aa3.65□□□□□ -1.83
CCT4-203ENST00000461540 SEPT11Q9NVA2 429 aaKnown RBP3.65□□□□□ -1.83
CCT4-203ENST00000461540 TMLHEQ9NVH6 421 aa3.65□□□□□ -1.83
CCT4-203ENST00000461540 CHORDC1Q9UHD1 332 aaPredicted RBP3.65□□□□□ -1.83
CCT4-203ENST00000461540 KCND3Q9UK17 655 aa3.65□□□□□ -1.83
CCT4-203ENST00000461540 BAG5Q9UL15 447 aa3.65□□□□□ -1.83
CCT4-203ENST00000461540 ZNF215Q9UL58 517 aaPredicted RBP3.65□□□□□ -1.83
CCT4-203ENST00000461540 NFU1Q9UMS0 254 aa3.65□□□□□ -1.83
CCT4-203ENST00000461540 SUFUQ9UMX1 484 aa3.65□□□□□ -1.83
CCT4-203ENST00000461540 ZNF711Q9Y462 761 aa3.65□□□□□ -1.83
CCT4-203ENST00000461540 SNX5Q9Y5X3 404 aa3.65□□□□□ -1.83
CCT4-203ENST00000461540 PTGES3LE9PB15 166 aa3.64□□□□□ -1.83
CCT4-203ENST00000461540 PEX12O00623 359 aa3.64□□□□□ -1.83
CCT4-203ENST00000461540 MDM4O15151 490 aa3.64□□□□□ -1.83
CCT4-203ENST00000461540 CNTN5O94779 1100 aa3.64□□□□□ -1.83
CCT4-203ENST00000461540 KAT7O95251 611 aa3.64□□□□□ -1.83
CCT4-203ENST00000461540 BAG2O95816 211 aa3.64□□□□□ -1.83
CCT4-203ENST00000461540 CLEC3BP05452 202 aa3.64□□□□□ -1.83
CCT4-203ENST00000461540 HOXC6P09630 235 aa3.64□□□□□ -1.83
CCT4-203ENST00000461540 CSH1P0DML2 217 aa3.64□□□□□ -1.83
CCT4-203ENST00000461540 CSH2P0DML3 217 aa3.64□□□□□ -1.83
CCT4-203ENST00000461540 GGT5P36269 586 aa3.64□□□□□ -1.83
CCT4-203ENST00000461540 DSCR9P59020 149 aa3.64□□□□□ -1.83
CCT4-203ENST00000461540 NLRP5P59047 1200 aa3.64□□□□□ -1.83
CCT4-203ENST00000461540 CSHL1Q14406 222 aa3.64□□□□□ -1.83
CCT4-203ENST00000461540 GRM4Q14833 912 aa3.64□□□□□ -1.83
CCT4-203ENST00000461540 TMEM266Q2M3C6 531 aa3.64□□□□□ -1.83
CCT4-203ENST00000461540 TRIM60Q495X7 471 aa3.64□□□□□ -1.83
CCT4-203ENST00000461540 KIAA1755Q5JYT7 1200 aa3.64□□□□□ -1.83
CCT4-203ENST00000461540 ASPHD1Q5U4P2 390 aa3.64□□□□□ -1.83
CCT4-203ENST00000461540 DGAT2L7PQ6IED9 249 aa3.64□□□□□ -1.83
CCT4-203ENST00000461540 NAA16Q6N069 864 aaPredicted RBP3.64□□□□□ -1.83
CCT4-203ENST00000461540 SLC22A25Q6T423 547 aa3.64□□□□□ -1.83
CCT4-203ENST00000461540 SYNE3Q6ZMZ3 975 aa3.64□□□□□ -1.83
CCT4-203ENST00000461540 Q6ZTK2 550 aa3.64□□□□□ -1.83
CCT4-203ENST00000461540 GALNTL5Q7Z4T8 443 aa3.64□□□□□ -1.83
CCT4-203ENST00000461540 PXKQ7Z7A4 578 aa3.64□□□□□ -1.83
CCT4-203ENST00000461540 IQCA1Q86XH1 822 aa3.64□□□□□ -1.83
CCT4-203ENST00000461540 NDUFAF2Q8N183 169 aa3.64□□□□□ -1.83
CCT4-203ENST00000461540 ZNF713Q8N859 430 aaPredicted RBP3.64□□□□□ -1.83
CCT4-203ENST00000461540 ARL10Q8N8L6 244 aa3.64□□□□□ -1.83
CCT4-203ENST00000461540 OR52N4Q8NGI2 321 aa3.64□□□□□ -1.83
CCT4-203ENST00000461540 ETNPPLQ8TBG4 499 aa3.64□□□□□ -1.83
CCT4-203ENST00000461540 NOC3LQ8WTT2 800 aaKnown RBP3.64□□□□□ -1.83
CCT4-203ENST00000461540 FAM120BQ96EK7 910 aaKnown RBP3.64□□□□□ -1.83
CCT4-203ENST00000461540 RBM17Q96I25 401 aaKnown RBP3.64□□□□□ -1.83
CCT4-203ENST00000461540 NUDT22Q9BRQ3 303 aa3.64□□□□□ -1.83
CCT4-203ENST00000461540 SEZ6LQ9BYH1 1024 aa3.64□□□□□ -1.83
CCT4-203ENST00000461540 SPAG4Q9NPE6 437 aa3.64□□□□□ -1.83
CCT4-203ENST00000461540 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.64□□□□□ -1.83
CCT4-203ENST00000461540 TBC1D14Q9P2M4 693 aa3.64□□□□□ -1.83
CCT4-203ENST00000461540 ACAD8Q9UKU7 415 aa3.64□□□□□ -1.83
CCT4-203ENST00000461540 CNTN6Q9UQ52 1028 aa3.64□□□□□ -1.83
CCT4-203ENST00000461540 LMTK3Q96Q04 1460 aa3.64□□□□□ -1.83
CCT4-203ENST00000461540 FAM90A18PA6NE21 464 aa3.63□□□□□ -1.83
CCT4-203ENST00000461540 FAM90A16PA6NEW6 464 aa3.63□□□□□ -1.83
CCT4-203ENST00000461540 OR2W5A6NFC9 320 aa3.63□□□□□ -1.83
CCT4-203ENST00000461540 TRIM64A6NGJ6 449 aa3.63□□□□□ -1.83
CCT4-203ENST00000461540 TRIM64BA6NI03 449 aa3.63□□□□□ -1.83
CCT4-203ENST00000461540 OR6C75A6NL08 312 aa3.63□□□□□ -1.83
CCT4-203ENST00000461540 FAM90A9PA6NNJ1 464 aa3.63□□□□□ -1.83
CCT4-203ENST00000461540 FAM90A5PA8MXJ8 464 aa3.63□□□□□ -1.83
CCT4-203ENST00000461540 FOXO6A8MYZ6 492 aa3.63□□□□□ -1.83
CCT4-203ENST00000461540 VILLO15195 856 aa3.63□□□□□ -1.83
CCT4-203ENST00000461540 LARGE1O95461 756 aa3.63□□□□□ -1.83
CCT4-203ENST00000461540 MLYCDO95822 493 aa3.63□□□□□ -1.83
CCT4-203ENST00000461540 F9P00740 461 aa3.63□□□□□ -1.83
CCT4-203ENST00000461540 KLKB1P03952 638 aa3.63□□□□□ -1.83
CCT4-203ENST00000461540 CYP1A2P05177 515 aa3.63□□□□□ -1.83
CCT4-203ENST00000461540 FAM90A15PP0C7V4 464 aa3.63□□□□□ -1.83
CCT4-203ENST00000461540 FAM90A14PP0C7W9 464 aa3.63□□□□□ -1.83
CCT4-203ENST00000461540 LAMP2P13473 410 aa3.63□□□□□ -1.83
CCT4-203ENST00000461540 TGM2P21980 687 aa3.63□□□□□ -1.83
CCT4-203ENST00000461540 MUTP22033 750 aa3.63□□□□□ -1.83
CCT4-203ENST00000461540 ABCD1P33897 745 aa3.63□□□□□ -1.83
CCT4-203ENST00000461540 TNNT3P45378 269 aaPredicted RBP3.63□□□□□ -1.83
CCT4-203ENST00000461540 HARS2P49590 506 aaKnown RBP3.63□□□□□ -1.83
CCT4-203ENST00000461540 IFI35P80217 286 aaPredicted RBP3.63□□□□□ -1.83
CCT4-203ENST00000461540 ROR2Q01974 943 aaKnown RBP3.63□□□□□ -1.83
CCT4-203ENST00000461540 SF3A3Q12874 501 aaKnown RBP eCLIP3.63□□□□□ -1.83
CCT4-203ENST00000461540 CAMK1Q14012 370 aa3.63□□□□□ -1.83
CCT4-203ENST00000461540 GALNTL6Q49A17 601 aa3.63□□□□□ -1.83
CCT4-203ENST00000461540 ZNF569Q5MCW4 686 aa3.63□□□□□ -1.83
CCT4-203ENST00000461540 Q5PR19 223 aa3.63□□□□□ -1.83
CCT4-203ENST00000461540 PRAMEF19Q5SWL8 479 aa3.63□□□□□ -1.83
CCT4-203ENST00000461540 WDR93Q6P2C0 686 aa3.63□□□□□ -1.83
CCT4-203ENST00000461540 H1FNTQ75WM6 255 aaPredicted RBP3.63□□□□□ -1.83
CCT4-203ENST00000461540 SZRD1Q7Z422 152 aa3.63□□□□□ -1.83
CCT4-203ENST00000461540 PRPF39Q86UA1 669 aaKnown RBP3.63□□□□□ -1.83
CCT4-203ENST00000461540 GPSM1Q86YR5 675 aa3.63□□□□□ -1.83
CCT4-203ENST00000461540 C17orf53Q8N3J3 647 aaPredicted RBP3.63□□□□□ -1.83
CCT4-203ENST00000461540 TTC39CQ8N584 583 aa3.63□□□□□ -1.83
CCT4-203ENST00000461540 FSIP1Q8NA03 581 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms