RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 SLC2A4P14672 509 aa3.09□□□□□ -1.91
HPS3-203ENST00000460822 LMO1P25800 156 aa3.09□□□□□ -1.91
HPS3-203ENST00000460822 HOXC13P31276 330 aa3.09□□□□□ -1.91
HPS3-203ENST00000460822 IDUAP35475 653 aa3.09□□□□□ -1.91
HPS3-203ENST00000460822 SKIV2L2P42285 1042 aaKnown RBP3.09□□□□□ -1.91
HPS3-203ENST00000460822 TNNT3P45378 269 aaPredicted RBP3.09□□□□□ -1.91
HPS3-203ENST00000460822 PIP4K2AP48426 406 aaPredicted RBP3.09□□□□□ -1.91
HPS3-203ENST00000460822 PTH2RP49190 550 aa3.09□□□□□ -1.91
HPS3-203ENST00000460822 LMAN1P49257 510 aa3.09□□□□□ -1.91
HPS3-203ENST00000460822 CACNA2D1P54289 1103 aa3.09□□□□□ -1.91
HPS3-203ENST00000460822 F2RL1P55085 397 aa3.09□□□□□ -1.91
HPS3-203ENST00000460822 RRP1P56182 461 aaKnown RBP3.09□□□□□ -1.91
HPS3-203ENST00000460822 CYP4F2P78329 520 aa3.09□□□□□ -1.91
HPS3-203ENST00000460822 SIM1P81133 766 aaPredicted RBP3.09□□□□□ -1.91
HPS3-203ENST00000460822 SLC14A1Q13336 389 aa3.09□□□□□ -1.91
HPS3-203ENST00000460822 TNFAIP1Q13829 316 aa3.09□□□□□ -1.91
HPS3-203ENST00000460822 VEPH1Q14D04 833 aa3.09□□□□□ -1.91
HPS3-203ENST00000460822 PPP2R5BQ15173 497 aa3.09□□□□□ -1.91
HPS3-203ENST00000460822 RNPS1Q15287 305 aaKnown RBP3.09□□□□□ -1.91
HPS3-203ENST00000460822 NTRK2Q16620 822 aa3.09□□□□□ -1.91
HPS3-203ENST00000460822 C5orf22Q49AR2 442 aa3.09□□□□□ -1.91
HPS3-203ENST00000460822 GLE1Q53GS7 698 aaKnown RBP3.09□□□□□ -1.91
HPS3-203ENST00000460822 AWAT1Q58HT5 328 aa3.09□□□□□ -1.91
HPS3-203ENST00000460822 FAM171A1Q5VUB5 890 aa3.09□□□□□ -1.91
HPS3-203ENST00000460822 GSTA5Q7RTV2 222 aa3.09□□□□□ -1.91
HPS3-203ENST00000460822 GRASPQ7Z6J2 395 aaPredicted RBP3.09□□□□□ -1.91
HPS3-203ENST00000460822 TFAP2DQ7Z6R9 452 aa3.09□□□□□ -1.91
HPS3-203ENST00000460822 RFX6Q8HWS3 928 aa3.09□□□□□ -1.91
HPS3-203ENST00000460822 RHPN2Q8IUC4 686 aa3.09□□□□□ -1.91
HPS3-203ENST00000460822 TICAM1Q8IUC6 712 aa3.09□□□□□ -1.91
HPS3-203ENST00000460822 IL17RCQ8NAC3 791 aa3.09□□□□□ -1.91
HPS3-203ENST00000460822 Q8NFD4 153 aa3.09□□□□□ -1.91
HPS3-203ENST00000460822 VPS33AQ96AX1 596 aa3.09□□□□□ -1.91
HPS3-203ENST00000460822 HIC2Q96JB3 615 aa3.09□□□□□ -1.91
HPS3-203ENST00000460822 GCNAQ96QF7 691 aa3.09□□□□□ -1.91
HPS3-203ENST00000460822 SRSF8Q9BRL6 282 aaKnown RBP3.09□□□□□ -1.91
HPS3-203ENST00000460822 FRMD8Q9BZ67 464 aaPredicted RBP3.09□□□□□ -1.91
HPS3-203ENST00000460822 NUF2Q9BZD4 464 aa3.09□□□□□ -1.91
HPS3-203ENST00000460822 EDEM3Q9BZQ6 932 aa3.09□□□□□ -1.91
HPS3-203ENST00000460822 SLC35C2Q9NQQ7 365 aa3.09□□□□□ -1.91
HPS3-203ENST00000460822 ARL8BQ9NVJ2 186 aa3.09□□□□□ -1.91
HPS3-203ENST00000460822 ASIC5Q9NY37 505 aa3.09□□□□□ -1.91
HPS3-203ENST00000460822 C5AR2Q9P296 337 aa3.09□□□□□ -1.91
HPS3-203ENST00000460822 FBXL17Q9UF56 701 aa3.09□□□□□ -1.91
HPS3-203ENST00000460822 NENFQ9UMX5 172 aa3.09□□□□□ -1.91
HPS3-203ENST00000460822 ST3GAL5Q9UNP4 418 aa3.09□□□□□ -1.91
HPS3-203ENST00000460822 ICKQ9UPZ9 632 aa3.09□□□□□ -1.91
HPS3-203ENST00000460822 COL11A2P13942 1736 aaPredicted RBP3.09□□□□□ -1.91
HPS3-203ENST00000460822 WIZO95785 1651 aa3.09□□□□□ -1.91
HPS3-203ENST00000460822 CEP162Q5TB80 1403 aa3.09□□□□□ -1.91
HPS3-203ENST00000460822 ADGRF5Q8IZF2 1346 aa3.09□□□□□ -1.92
HPS3-203ENST00000460822 SALL3Q9BXA9 1300 aa3.09□□□□□ -1.92
HPS3-203ENST00000460822 GLOD5A6NK44 160 aa3.09□□□□□ -1.92
HPS3-203ENST00000460822 CLGNO14967 610 aa3.09□□□□□ -1.92
HPS3-203ENST00000460822 TBCAO75347 108 aaKnown RBP3.09□□□□□ -1.92
HPS3-203ENST00000460822 CSPG5O95196 566 aa3.09□□□□□ -1.92
HPS3-203ENST00000460822 IGLV2-14P01704 120 aa3.09□□□□□ -1.92
HPS3-203ENST00000460822 HLA-DQA2P01906 255 aa3.09□□□□□ -1.92
HPS3-203ENST00000460822 CDK4P11802 303 aa3.09□□□□□ -1.92
HPS3-203ENST00000460822 SELLP14151 372 aa3.09□□□□□ -1.92
HPS3-203ENST00000460822 GRIA3P42263 894 aa3.09□□□□□ -1.92
HPS3-203ENST00000460822 CCT8P50990 548 aa3.09□□□□□ -1.92
HPS3-203ENST00000460822 PMS2P54278 862 aa3.09□□□□□ -1.92
HPS3-203ENST00000460822 ARSFP54793 590 aa3.09□□□□□ -1.92
HPS3-203ENST00000460822 YWHAZP63104 245 aaKnown RBP3.09□□□□□ -1.92
HPS3-203ENST00000460822 PPARDQ03181 441 aa3.09□□□□□ -1.92
HPS3-203ENST00000460822 PPP2R5CQ13362 524 aa3.09□□□□□ -1.92
HPS3-203ENST00000460822 FGFBP1Q14512 234 aa3.09□□□□□ -1.92
HPS3-203ENST00000460822 PCLAFQ15004 111 aa3.09□□□□□ -1.92
HPS3-203ENST00000460822 LARS2Q15031 903 aaKnown RBP3.09□□□□□ -1.92
HPS3-203ENST00000460822 ME3Q16798 604 aa3.09□□□□□ -1.92
HPS3-203ENST00000460822 COL28A1Q2UY09 1125 aa3.09□□□□□ -1.92
HPS3-203ENST00000460822 AARS2Q5JTZ9 985 aaKnown RBP3.09□□□□□ -1.92
HPS3-203ENST00000460822 ERMARDQ5T6L9 678 aa3.09□□□□□ -1.92
HPS3-203ENST00000460822 ZNF474Q6S9Z5 364 aaPredicted RBP3.09□□□□□ -1.92
HPS3-203ENST00000460822 IL27RAQ6UWB1 636 aa3.09□□□□□ -1.92
HPS3-203ENST00000460822 SLFN11Q7Z7L1 901 aa3.09□□□□□ -1.92
HPS3-203ENST00000460822 KBTBD6Q86V97 674 aa3.09□□□□□ -1.92
HPS3-203ENST00000460822 DNAAF5Q86Y56 855 aa3.09□□□□□ -1.92
HPS3-203ENST00000460822 TDRPQ86YL5 185 aa3.09□□□□□ -1.92
HPS3-203ENST00000460822 CEP97Q8IW35 865 aa3.09□□□□□ -1.92
HPS3-203ENST00000460822 NDUFAF2Q8N183 169 aa3.09□□□□□ -1.92
HPS3-203ENST00000460822 TMEM217Q8N7C4 229 aa3.09□□□□□ -1.92
HPS3-203ENST00000460822 POGLUT1Q8NBL1 392 aa3.09□□□□□ -1.92
HPS3-203ENST00000460822 PRPF31Q8WWY3 499 aaKnown RBP3.09□□□□□ -1.92
HPS3-203ENST00000460822 ELMOD3Q96FG2 381 aa3.09□□□□□ -1.92
HPS3-203ENST00000460822 PGAP3Q96FM1 320 aaPredicted RBP3.09□□□□□ -1.92
HPS3-203ENST00000460822 NAF1Q96HR8 494 aaKnown RBP3.09□□□□□ -1.92
HPS3-203ENST00000460822 CDHR1Q96JP9 859 aa3.09□□□□□ -1.92
HPS3-203ENST00000460822 NUAK2Q9H093 628 aa3.09□□□□□ -1.92
HPS3-203ENST00000460822 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.09□□□□□ -1.92
HPS3-203ENST00000460822 R3HDMLQ9H3Y0 253 aa3.09□□□□□ -1.92
HPS3-203ENST00000460822 KIF9Q9HAQ2 790 aa3.09□□□□□ -1.92
HPS3-203ENST00000460822 LTB4R2Q9NPC1 389 aa3.09□□□□□ -1.92
HPS3-203ENST00000460822 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.09□□□□□ -1.92
HPS3-203ENST00000460822 ABCF3Q9NUQ8 709 aa3.09□□□□□ -1.92
HPS3-203ENST00000460822 PLK2Q9NYY3 685 aa3.09□□□□□ -1.92
HPS3-203ENST00000460822 ISY1Q9ULR0 285 aaKnown RBP3.09□□□□□ -1.92
HPS3-203ENST00000460822 MTMR6Q9Y217 621 aa3.09□□□□□ -1.92
HPS3-203ENST00000460822 CLDN16Q9Y5I7 305 aa3.09□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms