RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 DKK3Q9UBP4 350 aa22.72■■□□□ 1.23
C9orf3-209ENST00000460573 ZKSCAN5Q9Y2L8 839 aa22.72■■□□□ 1.23
C9orf3-209ENST00000460573 PCDHGA5Q9Y5G8 931 aa22.72■■□□□ 1.23
C9orf3-209ENST00000460573 SHROOM3Q8TF72 1996 aa22.72■■□□□ 1.23
C9orf3-209ENST00000460573 PLXND1Q9Y4D7 1925 aa22.71■■□□□ 1.23
C9orf3-209ENST00000460573 WDR87Q6ZQQ6 2873 aa22.71■■□□□ 1.23
C9orf3-209ENST00000460573 BCLAF3A2AJT9 711 aaKnown RBP22.71■■□□□ 1.23
C9orf3-209ENST00000460573 DCDC2BA2VCK2 349 aa22.71■■□□□ 1.23
C9orf3-209ENST00000460573 INSIG1O15503 277 aa22.71■■□□□ 1.23
C9orf3-209ENST00000460573 NDUFS2O75306 463 aa22.71■■□□□ 1.23
C9orf3-209ENST00000460573 UGT2B4P06133 528 aa22.71■■□□□ 1.23
C9orf3-209ENST00000460573 GKP32189 559 aa22.71■■□□□ 1.23
C9orf3-209ENST00000460573 CXCR5P32302 372 aa22.71■■□□□ 1.23
C9orf3-209ENST00000460573 MPLP40238 635 aa22.71■■□□□ 1.23
C9orf3-209ENST00000460573 BCL2L1Q07817 233 aa22.71■■□□□ 1.23
C9orf3-209ENST00000460573 ZBTB17Q13105 803 aa22.71■■□□□ 1.23
C9orf3-209ENST00000460573 DARS2Q6PI48 645 aaKnown RBP22.71■■□□□ 1.23
C9orf3-209ENST00000460573 NCEH1Q6PIU2 408 aa22.71■■□□□ 1.23
C9orf3-209ENST00000460573 ERN2Q76MJ5 926 aaKnown RBP22.71■■□□□ 1.23
C9orf3-209ENST00000460573 VOPP1Q96AW1 172 aa22.71■■□□□ 1.23
C9orf3-209ENST00000460573 ARRDC3Q96B67 414 aa22.71■■□□□ 1.23
C9orf3-209ENST00000460573 TOE1Q96GM8 510 aaKnown RBP22.71■■□□□ 1.23
C9orf3-209ENST00000460573 KLHL32Q96NJ5 620 aa22.71■■□□□ 1.23
C9orf3-209ENST00000460573 PCED1AQ9H1Q7 454 aa22.71■■□□□ 1.23
C9orf3-209ENST00000460573 NEUROG2Q9H2A3 272 aa22.71■■□□□ 1.23
C9orf3-209ENST00000460573 KDM4CQ9H3R0 1056 aa22.71■■□□□ 1.23
C9orf3-209ENST00000460573 MBD1Q9UIS9 605 aaPredicted RBP22.71■■□□□ 1.23
C9orf3-209ENST00000460573 TTC7AQ9ULT0 858 aaPredicted RBP22.71■■□□□ 1.23
C9orf3-209ENST00000460573 SNX12Q9UMY4 172 aa22.71■■□□□ 1.23
C9orf3-209ENST00000460573 THADAQ6YHU6 1953 aa22.7■■□□□ 1.23
C9orf3-209ENST00000460573 FRYLO94915 3013 aa22.7■■□□□ 1.22
C9orf3-209ENST00000460573 A0A1W2PQ67 120 aa22.7■■□□□ 1.22
C9orf3-209ENST00000460573 TCRBV7S2A1N4TA0A589 114 aa22.7■■□□□ 1.22
C9orf3-209ENST00000460573 FGGP02679 453 aa22.7■■□□□ 1.22
C9orf3-209ENST00000460573 HLA-DQB2P05538 268 aa22.7■■□□□ 1.22
C9orf3-209ENST00000460573 PRLRP16471 622 aa22.7■■□□□ 1.22
C9orf3-209ENST00000460573 TCP1P17987 556 aaKnown RBP22.7■■□□□ 1.22
C9orf3-209ENST00000460573 PTPN3P26045 913 aa22.7■■□□□ 1.22
C9orf3-209ENST00000460573 NEK3P51956 506 aa22.7■■□□□ 1.22
C9orf3-209ENST00000460573 MAXP61244 160 aa22.7■■□□□ 1.22
C9orf3-209ENST00000460573 CNTN1Q12860 1018 aa22.7■■□□□ 1.22
C9orf3-209ENST00000460573 SF3A2Q15428 464 aaKnown RBP22.7■■□□□ 1.22
C9orf3-209ENST00000460573 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP22.7■■□□□ 1.22
C9orf3-209ENST00000460573 RASGEF1CQ8N431 466 aa22.7■■□□□ 1.22
C9orf3-209ENST00000460573 ZNF419Q96HQ0 510 aaPredicted RBP22.7■■□□□ 1.22
C9orf3-209ENST00000460573 TEKT5Q96M29 485 aa22.7■■□□□ 1.22
C9orf3-209ENST00000460573 OSBPL9Q96SU4 736 aa22.7■■□□□ 1.22
C9orf3-209ENST00000460573 NAP1L3Q99457 506 aaPredicted RBP22.7■■□□□ 1.22
C9orf3-209ENST00000460573 NAPGQ99747 312 aaPredicted RBP22.7■■□□□ 1.22
C9orf3-209ENST00000460573 SEMA3CQ99985 751 aa22.7■■□□□ 1.22
C9orf3-209ENST00000460573 CD93Q9NPY3 652 aa22.7■■□□□ 1.22
C9orf3-209ENST00000460573 SERGEFQ9UGK8 458 aa22.7■■□□□ 1.22
C9orf3-209ENST00000460573 TRHDEQ9UKU6 1024 aa22.7■■□□□ 1.22
C9orf3-209ENST00000460573 MED19A0JLT2 244 aaPredicted RBP22.69■■□□□ 1.22
C9orf3-209ENST00000460573 LRRC72A6NJI9 287 aa22.69■■□□□ 1.22
C9orf3-209ENST00000460573 C16orf96A6NNT2 1141 aa22.69■■□□□ 1.22
C9orf3-209ENST00000460573 SOCS5O75159 536 aa22.69■■□□□ 1.22
C9orf3-209ENST00000460573 STK10O94804 968 aaKnown RBP22.69■■□□□ 1.22
C9orf3-209ENST00000460573 ZNF806P0C7X5 589 aa22.69■■□□□ 1.22
C9orf3-209ENST00000460573 RBL1P28749 1068 aa22.69■■□□□ 1.22
C9orf3-209ENST00000460573 SUOXP51687 545 aa22.69■■□□□ 1.22
C9orf3-209ENST00000460573 METAP1P53582 386 aa22.69■■□□□ 1.22
C9orf3-209ENST00000460573 WASHC5Q12768 1159 aa22.69■■□□□ 1.22
C9orf3-209ENST00000460573 LONRF2Q1L5Z9 754 aa22.69■■□□□ 1.22
C9orf3-209ENST00000460573 POM121L1PQ3SYA9 428 aa22.69■■□□□ 1.22
C9orf3-209ENST00000460573 CFAP58Q5T655 872 aa22.69■■□□□ 1.22
C9orf3-209ENST00000460573 FBXL19Q6PCT2 694 aa22.69■■□□□ 1.22
C9orf3-209ENST00000460573 BRAT1Q6PJG6 821 aa22.69■■□□□ 1.22
C9orf3-209ENST00000460573 B4GALNT4Q76KP1 1039 aa22.69■■□□□ 1.22
C9orf3-209ENST00000460573 LPCAT2Q7L5N7 544 aa22.69■■□□□ 1.22
C9orf3-209ENST00000460573 FAM124AQ86V42 546 aa22.69■■□□□ 1.22
C9orf3-209ENST00000460573 CAMK1DQ8IU85 385 aa22.69■■□□□ 1.22
C9orf3-209ENST00000460573 CNTD1Q8N815 330 aa22.69■■□□□ 1.22
C9orf3-209ENST00000460573 FRMD1Q8N878 549 aa22.69■■□□□ 1.22
C9orf3-209ENST00000460573 CADM4Q8NFZ8 388 aa22.69■■□□□ 1.22
C9orf3-209ENST00000460573 SLC35B2Q8TB61 432 aa22.69■■□□□ 1.22
C9orf3-209ENST00000460573 RAB7BQ96AH8 199 aa22.69■■□□□ 1.22
C9orf3-209ENST00000460573 WDR24Q96S15 920 aa22.69■■□□□ 1.22
C9orf3-209ENST00000460573 DUSP15Q9H1R2 295 aaPredicted RBP22.69■■□□□ 1.22
C9orf3-209ENST00000460573 NOD2Q9HC29 1040 aa22.69■■□□□ 1.22
C9orf3-209ENST00000460573 VPS45Q9NRW7 570 aa22.69■■□□□ 1.22
C9orf3-209ENST00000460573 HOMER3Q9NSC5 361 aa22.69■■□□□ 1.22
C9orf3-209ENST00000460573 TPX2Q9ULW0 747 aaKnown RBP22.69■■□□□ 1.22
C9orf3-209ENST00000460573 TTLL3Q9Y4R7 772 aa22.69■■□□□ 1.22
C9orf3-209ENST00000460573 TSPAN11A1L157 253 aa22.68■■□□□ 1.22
C9orf3-209ENST00000460573 CTAGE9A4FU28 777 aa22.68■■□□□ 1.22
C9orf3-209ENST00000460573 CFAP69A5D8W1 941 aa22.68■■□□□ 1.22
C9orf3-209ENST00000460573 SLC30A4O14863 429 aa22.68■■□□□ 1.22
C9orf3-209ENST00000460573 SEMA4FO95754 770 aa22.68■■□□□ 1.22
C9orf3-209ENST00000460573 SERPINF2P08697 491 aa22.68■■□□□ 1.22
C9orf3-209ENST00000460573 BCKDHBP21953 392 aa22.68■■□□□ 1.22
C9orf3-209ENST00000460573 CA4P22748 312 aa22.68■■□□□ 1.22
C9orf3-209ENST00000460573 ACSL1P33121 698 aa22.68■■□□□ 1.22
C9orf3-209ENST00000460573 DHPSP49366 369 aaPredicted RBP22.68■■□□□ 1.22
C9orf3-209ENST00000460573 POLR2LP62875 67 aaKnown RBP22.68■■□□□ 1.22
C9orf3-209ENST00000460573 RPL6Q02878 288 aaKnown RBP22.68■■□□□ 1.22
C9orf3-209ENST00000460573 PIP5KL1Q5T9C9 394 aa22.68■■□□□ 1.22
C9orf3-209ENST00000460573 AGBL4Q5VU57 503 aa22.68■■□□□ 1.22
C9orf3-209ENST00000460573 PAPD7Q5XG87 772 aaKnown RBP22.68■■□□□ 1.22
C9orf3-209ENST00000460573 PMS2CLQ68D20 193 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms