RNA–Protein interactions for RNA: ENST00000460333.5

VPS13D-202, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 4,910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-202ENST00000460333 CALCAP01258 141 aa6.25□□□□□ -1.41
VPS13D-202ENST00000460333 ITGAVP06756 1048 aa6.25□□□□□ -1.41
VPS13D-202ENST00000460333 CRABP2P29373 138 aa6.25□□□□□ -1.41
VPS13D-202ENST00000460333 TM4SF4P48230 202 aa6.25□□□□□ -1.41
VPS13D-202ENST00000460333 SULT1E1P49888 294 aa6.25□□□□□ -1.41
VPS13D-202ENST00000460333 PSME3P61289 254 aa6.25□□□□□ -1.41
VPS13D-202ENST00000460333 FRG1Q14331 258 aaKnown RBP6.25□□□□□ -1.41
VPS13D-202ENST00000460333 ANGPT1Q15389 498 aa6.25□□□□□ -1.41
VPS13D-202ENST00000460333 SPANXN3Q5MJ09 141 aa6.25□□□□□ -1.41
VPS13D-202ENST00000460333 DEFB128Q7Z7B8 93 aa6.25□□□□□ -1.41
VPS13D-202ENST00000460333 AMIGO2Q86SJ2 522 aa6.25□□□□□ -1.41
VPS13D-202ENST00000460333 SYTL1Q8IYJ3 562 aa6.25□□□□□ -1.41
VPS13D-202ENST00000460333 TAGAPQ8N103 731 aa6.25□□□□□ -1.41
VPS13D-202ENST00000460333 RDH11Q8TC12 318 aa6.25□□□□□ -1.41
VPS13D-202ENST00000460333 TFB1MQ8WVM0 346 aaKnown RBP6.25□□□□□ -1.41
VPS13D-202ENST00000460333 SNX19Q92543 992 aa6.25□□□□□ -1.41
VPS13D-202ENST00000460333 ELOVL4Q9GZR5 314 aa6.25□□□□□ -1.41
VPS13D-202ENST00000460333 FBXO6Q9NRD1 293 aaPredicted RBP6.25□□□□□ -1.41
VPS13D-202ENST00000460333 TMEM9Q9P0T7 183 aa6.25□□□□□ -1.41
VPS13D-202ENST00000460333 NOTOA8MTQ0 251 aa6.25□□□□□ -1.41
VPS13D-202ENST00000460333 TSC22D2O75157 780 aa6.25□□□□□ -1.41
VPS13D-202ENST00000460333 H6PDO95479 791 aa6.25□□□□□ -1.41
VPS13D-202ENST00000460333 F9P00740 461 aa6.25□□□□□ -1.41
VPS13D-202ENST00000460333 MSL3P1P0C860 447 aa6.25□□□□□ -1.41
VPS13D-202ENST00000460333 CPB1P15086 417 aa6.25□□□□□ -1.41
VPS13D-202ENST00000460333 KCNE1P15382 129 aa6.25□□□□□ -1.41
VPS13D-202ENST00000460333 PGAM1P18669 254 aa6.25□□□□□ -1.41
VPS13D-202ENST00000460333 SLC26A3P40879 764 aa6.25□□□□□ -1.41
VPS13D-202ENST00000460333 CCT3P49368 545 aaKnown RBP6.25□□□□□ -1.41
VPS13D-202ENST00000460333 NSUN2Q08J23 767 aaKnown RBP eCLIP6.25□□□□□ -1.41
VPS13D-202ENST00000460333 ADGRE1Q14246 886 aa6.25□□□□□ -1.41
VPS13D-202ENST00000460333 C6orf10Q5SRN2 563 aa6.25□□□□□ -1.41
VPS13D-202ENST00000460333 TMEM53Q6P2H8 277 aa6.25□□□□□ -1.41
VPS13D-202ENST00000460333 TMEM26Q6ZUK4 368 aa6.25□□□□□ -1.41
VPS13D-202ENST00000460333 CYP2U1Q7Z449 544 aa6.25□□□□□ -1.41
VPS13D-202ENST00000460333 ALYREFQ86V81 257 aaKnown RBP6.25□□□□□ -1.41
VPS13D-202ENST00000460333 RNF135Q8IUD6 432 aa6.25□□□□□ -1.41
VPS13D-202ENST00000460333 ZDHHC13Q8IUH4 622 aa6.25□□□□□ -1.41
VPS13D-202ENST00000460333 SPATA2LQ8IUW3 424 aaPredicted RBP6.25□□□□□ -1.41
VPS13D-202ENST00000460333 NIPA2Q8N8Q9 360 aa6.25□□□□□ -1.41
VPS13D-202ENST00000460333 FNDC8Q8TC99 324 aa6.25□□□□□ -1.41
VPS13D-202ENST00000460333 C18orf25Q96B23 403 aaPredicted RBP6.25□□□□□ -1.41
VPS13D-202ENST00000460333 PHF21AQ96BD5 680 aa6.25□□□□□ -1.41
VPS13D-202ENST00000460333 BIRC8Q96P09 236 aa6.25□□□□□ -1.41
VPS13D-202ENST00000460333 SLC4A5Q9BY07 1137 aa6.25□□□□□ -1.41
VPS13D-202ENST00000460333 SEMA6AQ9H2E6 1030 aa6.25□□□□□ -1.41
VPS13D-202ENST00000460333 MARCH7Q9H992 704 aa6.25□□□□□ -1.41
VPS13D-202ENST00000460333 HES2Q9Y543 173 aa6.25□□□□□ -1.41
VPS13D-202ENST00000460333 KIAA1217Q5T5P2 1943 aa6.25□□□□□ -1.41
VPS13D-202ENST00000460333 NR5A2O00482 541 aa6.25□□□□□ -1.41
VPS13D-202ENST00000460333 LIASO43766 372 aa6.25□□□□□ -1.41
VPS13D-202ENST00000460333 TBX10O75333 385 aa6.25□□□□□ -1.41
VPS13D-202ENST00000460333 ABCB1P08183 1280 aaPredicted RBP6.25□□□□□ -1.41
VPS13D-202ENST00000460333 ATP6V1B2P21281 511 aa6.25□□□□□ -1.41
VPS13D-202ENST00000460333 AQP4P55087 323 aa6.25□□□□□ -1.41
VPS13D-202ENST00000460333 INCA1Q0VD86 236 aa6.25□□□□□ -1.41
VPS13D-202ENST00000460333 IKBKEQ14164 716 aa6.25□□□□□ -1.41
VPS13D-202ENST00000460333 CYP51A1Q16850 503 aa6.25□□□□□ -1.41
VPS13D-202ENST00000460333 ZNF423Q2M1K9 1284 aa6.25□□□□□ -1.41
VPS13D-202ENST00000460333 GALNTL6Q49A17 601 aa6.25□□□□□ -1.41
VPS13D-202ENST00000460333 ZBED5Q49AG3 693 aa6.25□□□□□ -1.41
VPS13D-202ENST00000460333 DENND5BQ6ZUT9 1274 aa6.25□□□□□ -1.41
VPS13D-202ENST00000460333 PSMA8Q8TAA3 256 aa6.25□□□□□ -1.41
VPS13D-202ENST00000460333 SGF29Q96ES7 293 aa6.25□□□□□ -1.41
VPS13D-202ENST00000460333 B3GALT6Q96L58 329 aa6.25□□□□□ -1.41
VPS13D-202ENST00000460333 SLITRK1Q96PX8 696 aa6.25□□□□□ -1.41
VPS13D-202ENST00000460333 NMUR2Q9GZQ4 415 aa6.25□□□□□ -1.41
VPS13D-202ENST00000460333 XYLT2Q9H1B5 865 aa6.25□□□□□ -1.41
VPS13D-202ENST00000460333 ABCB10Q9NRK6 738 aa6.25□□□□□ -1.41
VPS13D-202ENST00000460333 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.25□□□□□ -1.41
VPS13D-202ENST00000460333 RUVBL2Q9Y230 463 aaKnown RBP6.25□□□□□ -1.41
VPS13D-202ENST00000460333 KAT6AQ92794 2004 aa6.24□□□□□ -1.41
VPS13D-202ENST00000460333 MOXD2PA6NHM9 499 aa6.24□□□□□ -1.41
VPS13D-202ENST00000460333 TTLL13PA6NNM8 815 aa6.24□□□□□ -1.41
VPS13D-202ENST00000460333 EFCAB14O75071 495 aa6.24□□□□□ -1.41
VPS13D-202ENST00000460333 B3GAT3O94766 335 aa6.24□□□□□ -1.41
VPS13D-202ENST00000460333 ITGBL1O95965 494 aaPredicted RBP6.24□□□□□ -1.41
VPS13D-202ENST00000460333 DNAJB2P25686 324 aa6.24□□□□□ -1.41
VPS13D-202ENST00000460333 SLC5A3P53794 718 aa6.24□□□□□ -1.41
VPS13D-202ENST00000460333 BMPR2Q13873 1038 aa6.24□□□□□ -1.41
VPS13D-202ENST00000460333 C1DQ13901 141 aaKnown RBP6.24□□□□□ -1.41
VPS13D-202ENST00000460333 QPRTQ15274 297 aa6.24□□□□□ -1.41
VPS13D-202ENST00000460333 MOGQ16653 247 aa6.24□□□□□ -1.41
VPS13D-202ENST00000460333 AMHR2Q16671 573 aa6.24□□□□□ -1.41
VPS13D-202ENST00000460333 CYP1B1Q16678 543 aa6.24□□□□□ -1.41
VPS13D-202ENST00000460333 CCDC142Q17RM4 750 aa6.24□□□□□ -1.41
VPS13D-202ENST00000460333 NADK2Q4G0N4 442 aa6.24□□□□□ -1.41
VPS13D-202ENST00000460333 PTPN20Q4JDL3 420 aa6.24□□□□□ -1.41
VPS13D-202ENST00000460333 ARHGAP17Q68EM7 881 aa6.24□□□□□ -1.41
VPS13D-202ENST00000460333 GALNT18Q6P9A2 607 aa6.24□□□□□ -1.41
VPS13D-202ENST00000460333 RNF19BQ6ZMZ0 732 aa6.24□□□□□ -1.41
VPS13D-202ENST00000460333 ADGRG6Q86SQ4 1221 aa6.24□□□□□ -1.41
VPS13D-202ENST00000460333 TMEM192Q8IY95 271 aa6.24□□□□□ -1.41
VPS13D-202ENST00000460333 FAM47BQ8NA70 645 aa6.24□□□□□ -1.41
VPS13D-202ENST00000460333 ACTL9Q8TC94 416 aa6.24□□□□□ -1.41
VPS13D-202ENST00000460333 COLEC11Q9BWP8 271 aa6.24□□□□□ -1.41
VPS13D-202ENST00000460333 FTHL17Q9BXU8 183 aa6.24□□□□□ -1.41
VPS13D-202ENST00000460333 C1orf21Q9H246 121 aa6.24□□□□□ -1.41
VPS13D-202ENST00000460333 MFSD1Q9H3U5 465 aa6.24□□□□□ -1.41
VPS13D-202ENST00000460333 R3HDMLQ9H3Y0 253 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 113.8 ms