RNA–Protein interactions for RNA: ENST00000459708.1

SSX2IP-204, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 5

Gene SSX2IP, Length 453 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-204ENST00000459708 CADM3Q8N126 398 aa3.92□□□□□ -1.78
SSX2IP-204ENST00000459708 ANKRD44Q8N8A2 993 aa3.92□□□□□ -1.78
SSX2IP-204ENST00000459708 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.92□□□□□ -1.78
SSX2IP-204ENST00000459708 ZNF479Q96JC4 524 aa3.92□□□□□ -1.78
SSX2IP-204ENST00000459708 MARK4Q96L34 752 aa3.92□□□□□ -1.78
SSX2IP-204ENST00000459708 PPP1R10Q96QC0 940 aaKnown RBP3.92□□□□□ -1.78
SSX2IP-204ENST00000459708 PYM1Q9BRP8 204 aaKnown RBP3.92□□□□□ -1.78
SSX2IP-204ENST00000459708 HERPUD2Q9BSE4 406 aa3.92□□□□□ -1.78
SSX2IP-204ENST00000459708 CHMP4AQ9BY43 222 aa3.92□□□□□ -1.78
SSX2IP-204ENST00000459708 CHMP4BQ9H444 224 aaKnown RBP3.92□□□□□ -1.78
SSX2IP-204ENST00000459708 STN1Q9H668 368 aaKnown RBP3.92□□□□□ -1.78
SSX2IP-204ENST00000459708 NLKQ9UBE8 527 aa3.92□□□□□ -1.78
SSX2IP-204ENST00000459708 DHDHQ9UQ10 334 aa3.92□□□□□ -1.78
SSX2IP-204ENST00000459708 GDAQ9Y2T3 454 aa3.92□□□□□ -1.78
SSX2IP-204ENST00000459708 PTCH1Q13635 1447 aa3.92□□□□□ -1.78
SSX2IP-204ENST00000459708 CDC42BPGQ6DT37 1551 aa3.92□□□□□ -1.78
SSX2IP-204ENST00000459708 ARHGEF28Q8N1W1 1705 aaKnown RBP3.92□□□□□ -1.78
SSX2IP-204ENST00000459708 ANKRD26Q9UPS8 1709 aa3.92□□□□□ -1.78
SSX2IP-204ENST00000459708 RIMS1Q86UR5 1692 aaKnown RBP3.91□□□□□ -1.78
SSX2IP-204ENST00000459708 QRICH2Q9H0J4 1663 aa3.91□□□□□ -1.78
SSX2IP-204ENST00000459708 KIF13AQ9H1H9 1805 aa3.91□□□□□ -1.78
SSX2IP-204ENST00000459708 IGKV2D-30A0A075B6S6 120 aa3.91□□□□□ -1.78
SSX2IP-204ENST00000459708 VWA3AA6NCI4 1184 aa3.91□□□□□ -1.78
SSX2IP-204ENST00000459708 INAFM1C9JVW0 142 aa3.91□□□□□ -1.78
SSX2IP-204ENST00000459708 PEX12O00623 359 aa3.91□□□□□ -1.78
SSX2IP-204ENST00000459708 RNMTO43148 476 aaKnown RBP3.91□□□□□ -1.78
SSX2IP-204ENST00000459708 KLK10O43240 276 aa3.91□□□□□ -1.78
SSX2IP-204ENST00000459708 LDB2O43679 373 aa3.91□□□□□ -1.78
SSX2IP-204ENST00000459708 DHX16O60231 1041 aaKnown RBP3.91□□□□□ -1.78
SSX2IP-204ENST00000459708 TNNT1P13805 278 aa3.91□□□□□ -1.78
SSX2IP-204ENST00000459708 ARSBP15848 533 aa3.91□□□□□ -1.78
SSX2IP-204ENST00000459708 DPP6P42658 865 aa3.91□□□□□ -1.78
SSX2IP-204ENST00000459708 ENTPD1P49961 510 aa3.91□□□□□ -1.78
SSX2IP-204ENST00000459708 PMS2P54278 862 aa3.91□□□□□ -1.78
SSX2IP-204ENST00000459708 GOLGA8FQ08AF8 430 aa3.91□□□□□ -1.78
SSX2IP-204ENST00000459708 GPS2Q13227 327 aa3.91□□□□□ -1.78
SSX2IP-204ENST00000459708 FBXO43Q4G163 708 aa3.91□□□□□ -1.78
SSX2IP-204ENST00000459708 TMEM268Q5VZI3 342 aa3.91□□□□□ -1.78
SSX2IP-204ENST00000459708 DENND1BQ6P3S1 775 aa3.91□□□□□ -1.78
SSX2IP-204ENST00000459708 SERPINA11Q86U17 422 aa3.91□□□□□ -1.78
SSX2IP-204ENST00000459708 PRR26Q8N8Z3 221 aa3.91□□□□□ -1.78
SSX2IP-204ENST00000459708 BICD2Q8TD16 824 aa3.91□□□□□ -1.78
SSX2IP-204ENST00000459708 NCSTNQ92542 709 aa3.91□□□□□ -1.78
SSX2IP-204ENST00000459708 ATOH1Q92858 354 aaPredicted RBP3.91□□□□□ -1.78
SSX2IP-204ENST00000459708 LHPPQ9H008 270 aa3.91□□□□□ -1.78
SSX2IP-204ENST00000459708 LMAN2LQ9H0V9 348 aa3.91□□□□□ -1.78
SSX2IP-204ENST00000459708 CATSPERBQ9H7T0 1116 aa3.91□□□□□ -1.78
SSX2IP-204ENST00000459708 GRHL1Q9NZI5 618 aa3.91□□□□□ -1.78
SSX2IP-204ENST00000459708 SEL1LQ9UBV2 794 aa3.91□□□□□ -1.78
SSX2IP-204ENST00000459708 PCDHA7Q9UN72 937 aa3.91□□□□□ -1.78
SSX2IP-204ENST00000459708 RAI2Q9Y5P3 530 aa3.91□□□□□ -1.78
SSX2IP-204ENST00000459708 PTGDR2Q9Y5Y4 395 aa3.91□□□□□ -1.78
SSX2IP-204ENST00000459708 ARHGAP23Q9P227 1491 aa3.91□□□□□ -1.78
SSX2IP-204ENST00000459708 ANKARQ7Z5J8 1434 aa3.9□□□□□ -1.78
SSX2IP-204ENST00000459708 NCOA3Q9Y6Q9 1424 aa3.9□□□□□ -1.78
SSX2IP-204ENST00000459708 SAC3D1A6NKF1 404 aa3.9□□□□□ -1.79
SSX2IP-204ENST00000459708 HSPB6O14558 160 aa3.9□□□□□ -1.79
SSX2IP-204ENST00000459708 SPRY3O43610 288 aa3.9□□□□□ -1.79
SSX2IP-204ENST00000459708 ADAP00813 363 aa3.9□□□□□ -1.79
SSX2IP-204ENST00000459708 NGFRP08138 427 aa3.9□□□□□ -1.79
SSX2IP-204ENST00000459708 PLA2G2AP14555 144 aa3.9□□□□□ -1.79
SSX2IP-204ENST00000459708 CDC25AP30304 524 aa3.9□□□□□ -1.79
SSX2IP-204ENST00000459708 HNF1BP35680 557 aa3.9□□□□□ -1.79
SSX2IP-204ENST00000459708 THPOP40225 353 aa3.9□□□□□ -1.79
SSX2IP-204ENST00000459708 ZP1P60852 638 aa3.9□□□□□ -1.79
SSX2IP-204ENST00000459708 ROR2Q01974 943 aaKnown RBP3.9□□□□□ -1.79
SSX2IP-204ENST00000459708 CALD1Q05682 793 aaKnown RBP3.9□□□□□ -1.79
SSX2IP-204ENST00000459708 SLC12A1Q13621 1099 aa3.9□□□□□ -1.79
SSX2IP-204ENST00000459708 HNF4GQ14541 408 aa3.9□□□□□ -1.79
SSX2IP-204ENST00000459708 LYZL4Q96KX0 146 aa3.9□□□□□ -1.79
SSX2IP-204ENST00000459708 CFAP53Q96M91 514 aa3.9□□□□□ -1.79
SSX2IP-204ENST00000459708 CLSTN3Q9BQT9 956 aa3.9□□□□□ -1.79
SSX2IP-204ENST00000459708 SF3B5Q9BWJ5 86 aaKnown RBP3.9□□□□□ -1.79
SSX2IP-204ENST00000459708 NPLQ9BXD5 320 aaPredicted RBP3.9□□□□□ -1.79
SSX2IP-204ENST00000459708 DCLK3Q9C098 648 aa3.9□□□□□ -1.79
SSX2IP-204ENST00000459708 MROH8Q9H579 483 aa3.9□□□□□ -1.79
SSX2IP-204ENST00000459708 TERF2IPQ9NYB0 399 aa3.9□□□□□ -1.79
SSX2IP-204ENST00000459708 FBXO40Q9UH90 709 aa3.9□□□□□ -1.79
SSX2IP-204ENST00000459708 FZD10Q9ULW2 581 aa3.9□□□□□ -1.79
SSX2IP-204ENST00000459708 NUDCQ9Y266 331 aa3.9□□□□□ -1.79
SSX2IP-204ENST00000459708 A2ML1A8K2U0 1454 aa3.9□□□□□ -1.79
SSX2IP-204ENST00000459708 ZNF142P52746 1687 aaPredicted RBP3.9□□□□□ -1.79
SSX2IP-204ENST00000459708 USP54Q70EL1 1684 aa3.9□□□□□ -1.79
SSX2IP-204ENST00000459708 SOS1Q07889 1333 aaPredicted RBP3.9□□□□□ -1.79
SSX2IP-204ENST00000459708 PLEKHG1Q9ULL1 1385 aa3.89□□□□□ -1.79
SSX2IP-204ENST00000459708 YTHDC2Q9H6S0 1430 aaKnown RBP3.89□□□□□ -1.79
SSX2IP-204ENST00000459708 YEATS2Q9ULM3 1422 aa3.89□□□□□ -1.79
SSX2IP-204ENST00000459708 C17orf102A2RUQ5 167 aa3.89□□□□□ -1.79
SSX2IP-204ENST00000459708 FAM90A7PA6NKC0 464 aa3.89□□□□□ -1.79
SSX2IP-204ENST00000459708 FAM90A22PA8MWA6 464 aa3.89□□□□□ -1.79
SSX2IP-204ENST00000459708 FAM90A12PA8MX19 464 aa3.89□□□□□ -1.79
SSX2IP-204ENST00000459708 FAM90A23PA8MXZ1 464 aa3.89□□□□□ -1.79
SSX2IP-204ENST00000459708 LACTBL1A8MY62 500 aa3.89□□□□□ -1.79
SSX2IP-204ENST00000459708 LIASO43766 372 aa3.89□□□□□ -1.79
SSX2IP-204ENST00000459708 WEE2P0C1S8 567 aa3.89□□□□□ -1.79
SSX2IP-204ENST00000459708 MYZAPP0CAP1 466 aa3.89□□□□□ -1.79
SSX2IP-204ENST00000459708 CKMT1AP12532 417 aa3.89□□□□□ -1.79
SSX2IP-204ENST00000459708 YWHAQP27348 245 aa3.89□□□□□ -1.79
SSX2IP-204ENST00000459708 RFC1P35251 1148 aaPredicted RBP3.89□□□□□ -1.79
SSX2IP-204ENST00000459708 CDH12P55289 794 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms