RNA–Protein interactions for RNA: ENST00000458085.6

CAPN13-203, Transcript of calpain 13, humanhuman

TSL 5

Gene CAPN13, Length 2,269 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN13-203ENST00000458085 RANBP9Q96S59 729 aa16.51■□□□□ 0.23
CAPN13-203ENST00000458085 RETREG1Q9H6L5 497 aa16.51■□□□□ 0.23
CAPN13-203ENST00000458085 HAUS2Q9NVX0 235 aa16.51■□□□□ 0.23
CAPN13-203ENST00000458085 MROH6A6NGR9 719 aa16.5■□□□□ 0.23
CAPN13-203ENST00000458085 BIRC5O15392 142 aa16.5■□□□□ 0.23
CAPN13-203ENST00000458085 SIN3BO75182 1162 aa16.5■□□□□ 0.23
CAPN13-203ENST00000458085 C8AP07357 584 aa16.5■□□□□ 0.23
CAPN13-203ENST00000458085 EN2P19622 333 aaPredicted RBP16.5■□□□□ 0.23
CAPN13-203ENST00000458085 OCRLQ01968 901 aa16.5■□□□□ 0.23
CAPN13-203ENST00000458085 CDK18Q07002 472 aa16.5■□□□□ 0.23
CAPN13-203ENST00000458085 ZNF460Q14592 562 aa16.5■□□□□ 0.23
CAPN13-203ENST00000458085 FYB2Q5VWT5 728 aa16.5■□□□□ 0.23
CAPN13-203ENST00000458085 ATG14Q6ZNE5 492 aa16.5■□□□□ 0.23
CAPN13-203ENST00000458085 HERC6Q8IVU3 1022 aa16.5■□□□□ 0.23
CAPN13-203ENST00000458085 GPR65Q8IYL9 337 aa16.5■□□□□ 0.23
CAPN13-203ENST00000458085 CARNMT1Q8N4J0 409 aa16.5■□□□□ 0.23
CAPN13-203ENST00000458085 PLCD4Q9BRC7 762 aa16.5■□□□□ 0.23
CAPN13-203ENST00000458085 CINPQ9BW66 212 aaPredicted RBP16.5■□□□□ 0.23
CAPN13-203ENST00000458085 PRKD2Q9BZL6 878 aa16.5■□□□□ 0.23
CAPN13-203ENST00000458085 MUC3BQ9H195 1237 aa16.5■□□□□ 0.23
CAPN13-203ENST00000458085 MYLK2Q9H1R3 596 aa16.5■□□□□ 0.23
CAPN13-203ENST00000458085 SEPT3Q9UH03 358 aa16.5■□□□□ 0.23
CAPN13-203ENST00000458085 CARNS1A5YM72 827 aa16.5■□□□□ 0.23
CAPN13-203ENST00000458085 OR51F1A6NGY5 319 aa16.5■□□□□ 0.23
CAPN13-203ENST00000458085 GFRA2O00451 464 aa16.5■□□□□ 0.23
CAPN13-203ENST00000458085 LDB2O43679 373 aa16.5■□□□□ 0.23
CAPN13-203ENST00000458085 HAUS5O94927 633 aa16.5■□□□□ 0.23
CAPN13-203ENST00000458085 FGF3P11487 239 aaPredicted RBP16.5■□□□□ 0.23
CAPN13-203ENST00000458085 DNAJB1P25685 340 aa16.5■□□□□ 0.23
CAPN13-203ENST00000458085 SCNN1BP51168 640 aa16.5■□□□□ 0.23
CAPN13-203ENST00000458085 THOC5Q13769 683 aaKnown RBP16.5■□□□□ 0.23
CAPN13-203ENST00000458085 INSCQ1MX18 579 aa16.5■□□□□ 0.23
CAPN13-203ENST00000458085 PABPC1LQ4VXU2 614 aaKnown RBP16.5■□□□□ 0.23
CAPN13-203ENST00000458085 TMEM240Q5SV17 173 aa16.5■□□□□ 0.23
CAPN13-203ENST00000458085 MBLAC2Q68D91 279 aa16.5■□□□□ 0.23
CAPN13-203ENST00000458085 NEPROQ6NW34 567 aa16.5■□□□□ 0.23
CAPN13-203ENST00000458085 C10orf107Q8IVU9 208 aa16.5■□□□□ 0.23
CAPN13-203ENST00000458085 C2CD4AQ8NCU7 369 aaPredicted RBP16.5■□□□□ 0.23
CAPN13-203ENST00000458085 IFT43Q96FT9 208 aa16.5■□□□□ 0.23
CAPN13-203ENST00000458085 FEM1CQ96JP0 617 aa16.5■□□□□ 0.23
CAPN13-203ENST00000458085 SMIM14Q96QK8 99 aa16.5■□□□□ 0.23
CAPN13-203ENST00000458085 TCF25Q9BQ70 676 aa16.5■□□□□ 0.23
CAPN13-203ENST00000458085 ACTR5Q9H9F9 607 aaPredicted RBP16.5■□□□□ 0.23
CAPN13-203ENST00000458085 FBXO6Q9NRD1 293 aaPredicted RBP16.5■□□□□ 0.23
CAPN13-203ENST00000458085 NSMCE4AQ9NXX6 385 aa16.5■□□□□ 0.23
CAPN13-203ENST00000458085 MAFFQ9ULX9 164 aa16.5■□□□□ 0.23
CAPN13-203ENST00000458085 INSL6Q9Y581 213 aa16.5■□□□□ 0.23
CAPN13-203ENST00000458085 ARL5AQ9Y689 179 aa16.5■□□□□ 0.23
CAPN13-203ENST00000458085 A0A0G2JND7 137 aa16.49■□□□□ 0.23
CAPN13-203ENST00000458085 A0A1W2PRU2 124 aa16.49■□□□□ 0.23
CAPN13-203ENST00000458085 SNNO75324 88 aaPredicted RBP16.49■□□□□ 0.23
CAPN13-203ENST00000458085 LRG1P02750 347 aa16.49■□□□□ 0.23
CAPN13-203ENST00000458085 SERPINF2P08697 491 aa16.49■□□□□ 0.23
CAPN13-203ENST00000458085 DLDP09622 509 aaKnown RBP16.49■□□□□ 0.23
CAPN13-203ENST00000458085 TROVE2P10155 538 aaKnown RBP eCLIP16.49■□□□□ 0.23
CAPN13-203ENST00000458085 PAMP19021 973 aa16.49■□□□□ 0.23
CAPN13-203ENST00000458085 CR2P20023 1033 aa16.49■□□□□ 0.23
CAPN13-203ENST00000458085 USP10Q14694 798 aaKnown RBP16.49■□□□□ 0.23
CAPN13-203ENST00000458085 CNSTQ6PJW8 725 aa16.49■□□□□ 0.23
CAPN13-203ENST00000458085 NLRP9Q7RTR0 991 aa16.49■□□□□ 0.23
CAPN13-203ENST00000458085 CEP97Q8IW35 865 aa16.49■□□□□ 0.23
CAPN13-203ENST00000458085 KREMEN2Q8NCW0 462 aa16.49■□□□□ 0.23
CAPN13-203ENST00000458085 BLOC1S5Q8TDH9 187 aa16.49■□□□□ 0.23
CAPN13-203ENST00000458085 ERP27Q96DN0 273 aa16.49■□□□□ 0.23
CAPN13-203ENST00000458085 TRIB3Q96RU7 358 aa16.49■□□□□ 0.23
CAPN13-203ENST00000458085 TRIM55Q9BYV6 548 aa16.49■□□□□ 0.23
CAPN13-203ENST00000458085 SMG9Q9H0W8 520 aaKnown RBP16.49■□□□□ 0.23
CAPN13-203ENST00000458085 FBXO5Q9UKT4 447 aa16.49■□□□□ 0.23
CAPN13-203ENST00000458085 CDH23Q9H251 3354 aa16.49■□□□□ 0.23
CAPN13-203ENST00000458085 H0Y626 953 aa16.49■□□□□ 0.23
CAPN13-203ENST00000458085 ITM2AO43736 263 aa16.49■□□□□ 0.23
CAPN13-203ENST00000458085 LYPLA1O75608 230 aaPredicted RBP16.49■□□□□ 0.23
CAPN13-203ENST00000458085 IL1BP01584 269 aa16.49■□□□□ 0.23
CAPN13-203ENST00000458085 MPOP05164 745 aa16.49■□□□□ 0.23
CAPN13-203ENST00000458085 CKMP06732 381 aa16.49■□□□□ 0.23
CAPN13-203ENST00000458085 CREMQ03060 361 aa16.49■□□□□ 0.23
CAPN13-203ENST00000458085 FPGSQ05932 587 aa16.49■□□□□ 0.23
CAPN13-203ENST00000458085 BNIP1Q12981 228 aa16.49■□□□□ 0.23
CAPN13-203ENST00000458085 PPIGQ13427 754 aaKnown RBP eCLIP16.49■□□□□ 0.23
CAPN13-203ENST00000458085 PLPP4Q5VZY2 271 aa16.49■□□□□ 0.23
CAPN13-203ENST00000458085 ATG16L1Q676U5 607 aa16.49■□□□□ 0.23
CAPN13-203ENST00000458085 PTAR1Q7Z6K3 402 aaPredicted RBP16.49■□□□□ 0.23
CAPN13-203ENST00000458085 UBE2Q1Q7Z7E8 422 aa16.49■□□□□ 0.23
CAPN13-203ENST00000458085 LDB1Q86U70 411 aaPredicted RBP16.49■□□□□ 0.23
CAPN13-203ENST00000458085 TRIM42Q8IWZ5 723 aa16.49■□□□□ 0.23
CAPN13-203ENST00000458085 HDAC10Q969S8 669 aa16.49■□□□□ 0.23
CAPN13-203ENST00000458085 DDX50Q9BQ39 737 aaKnown RBP16.49■□□□□ 0.23
CAPN13-203ENST00000458085 C1QTNF1Q9BXJ1 281 aa16.49■□□□□ 0.23
CAPN13-203ENST00000458085 HCFC1R1Q9NWW0 138 aa16.49■□□□□ 0.23
CAPN13-203ENST00000458085 COPG2Q9UBF2 871 aa16.49■□□□□ 0.23
CAPN13-203ENST00000458085 ANKRD36A6QL64 1941 aa16.49■□□□□ 0.23
CAPN13-203ENST00000458085 FAM95CA0A1B0GW59 222 aa16.48■□□□□ 0.23
CAPN13-203ENST00000458085 CCL16O15467 120 aa16.48■□□□□ 0.23
CAPN13-203ENST00000458085 DNAJC6O75061 913 aa16.48■□□□□ 0.23
CAPN13-203ENST00000458085 ZMPSTE24O75844 475 aa16.48■□□□□ 0.23
CAPN13-203ENST00000458085 SLC35E2BP0CK96 405 aa16.48■□□□□ 0.23
CAPN13-203ENST00000458085 ARRB2P32121 409 aa16.48■□□□□ 0.23
CAPN13-203ENST00000458085 CCR2P41597 374 aa16.48■□□□□ 0.23
CAPN13-203ENST00000458085 HSF5Q4G112 596 aaPredicted RBP16.48■□□□□ 0.23
CAPN13-203ENST00000458085 RAPH1Q70E73 1250 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms