RNA–Protein interactions for RNA: ENST00000456089.1

TREX1-203, Transcript of three prime repair exonuclease 1, humanhuman

TSL 3 BASIC

Gene TREX1, Length 629 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-203ENST00000456089 C16orf96A6NNT2 1141 aa13.12□□□□□ -0.31
TREX1-203ENST00000456089 EIF3CLB5ME19 914 aaKnown RBP13.12□□□□□ -0.31
TREX1-203ENST00000456089 KRIT1O00522 736 aa13.12□□□□□ -0.31
TREX1-203ENST00000456089 FGF10O15520 208 aaPredicted RBP13.12□□□□□ -0.31
TREX1-203ENST00000456089 SPINT1O43278 529 aa13.12□□□□□ -0.31
TREX1-203ENST00000456089 PIAS2O75928 621 aa13.12□□□□□ -0.31
TREX1-203ENST00000456089 UGT2B4P06133 528 aa13.12□□□□□ -0.31
TREX1-203ENST00000456089 ITIH2P19823 946 aa13.12□□□□□ -0.31
TREX1-203ENST00000456089 HTR7P34969 479 aa13.12□□□□□ -0.31
TREX1-203ENST00000456089 OGDHQ02218 1023 aa13.12□□□□□ -0.31
TREX1-203ENST00000456089 ZNF211Q13398 564 aaPredicted RBP13.12□□□□□ -0.31
TREX1-203ENST00000456089 ERMARDQ5T6L9 678 aa13.12□□□□□ -0.31
TREX1-203ENST00000456089 ALKBH5Q6P6C2 394 aaKnown RBP13.12□□□□□ -0.31
TREX1-203ENST00000456089 ABI3BPQ7Z7G0 1075 aa13.12□□□□□ -0.31
TREX1-203ENST00000456089 RTL3Q8N8U3 475 aaKnown RBP13.12□□□□□ -0.31
TREX1-203ENST00000456089 OR4C6Q8NH72 309 aa13.12□□□□□ -0.31
TREX1-203ENST00000456089 VOPP1Q96AW1 172 aa13.12□□□□□ -0.31
TREX1-203ENST00000456089 EIF3CQ99613 913 aaKnown RBP13.12□□□□□ -0.31
TREX1-203ENST00000456089 DHX35Q9H5Z1 703 aaKnown RBP13.12□□□□□ -0.31
TREX1-203ENST00000456089 KLF15Q9UIH9 416 aa13.12□□□□□ -0.31
TREX1-203ENST00000456089 AP4E1Q9UPM8 1137 aa13.12□□□□□ -0.31
TREX1-203ENST00000456089 PCDHB1Q9Y5F3 818 aa13.12□□□□□ -0.31
TREX1-203ENST00000456089 A0A087X0T9 212 aa13.11□□□□□ -0.31
TREX1-203ENST00000456089 ZSCAN5CA6NGD5 496 aaPredicted RBP13.11□□□□□ -0.31
TREX1-203ENST00000456089 A6NNZ2 444 aa13.11□□□□□ -0.31
TREX1-203ENST00000456089 EEF2KO00418 725 aaKnown RBP13.11□□□□□ -0.31
TREX1-203ENST00000456089 BUB1O43683 1085 aa13.11□□□□□ -0.31
TREX1-203ENST00000456089 FAM228BP0C875 321 aa13.11□□□□□ -0.31
TREX1-203ENST00000456089 ACP1P24666 158 aa13.11□□□□□ -0.31
TREX1-203ENST00000456089 MIPP30301 263 aa13.11□□□□□ -0.31
TREX1-203ENST00000456089 RPS21P63220 83 aaKnown RBP13.11□□□□□ -0.31
TREX1-203ENST00000456089 FZD2Q14332 565 aa13.11□□□□□ -0.31
TREX1-203ENST00000456089 PIGHQ14442 188 aaPredicted RBP13.11□□□□□ -0.31
TREX1-203ENST00000456089 ACAP1Q15027 740 aa13.11□□□□□ -0.31
TREX1-203ENST00000456089 KIAA1161Q6NSJ0 714 aa13.11□□□□□ -0.31
TREX1-203ENST00000456089 VSTM4Q8IW00 320 aa13.11□□□□□ -0.31
TREX1-203ENST00000456089 FEM1CQ96JP0 617 aa13.11□□□□□ -0.31
TREX1-203ENST00000456089 APOLD1Q96LR9 279 aa13.11□□□□□ -0.31
TREX1-203ENST00000456089 KLHL32Q96NJ5 620 aa13.11□□□□□ -0.31
TREX1-203ENST00000456089 TRIM5Q9C035 493 aa13.11□□□□□ -0.31
TREX1-203ENST00000456089 THAP2Q9H0W7 228 aa13.11□□□□□ -0.31
TREX1-203ENST00000456089 NOL6Q9H6R4 1146 aaKnown RBP13.11□□□□□ -0.31
TREX1-203ENST00000456089 SCUBE2Q9NQ36 999 aa13.11□□□□□ -0.31
TREX1-203ENST00000456089 IP6K2Q9UHH9 426 aa13.11□□□□□ -0.31
TREX1-203ENST00000456089 CLCA2Q9UQC9 943 aa13.11□□□□□ -0.31
TREX1-203ENST00000456089 A0A087WV48 116 aa13.1□□□□□ -0.31
TREX1-203ENST00000456089 LY6G6EA0A0G2JKS1 128 aa13.1□□□□□ -0.31
TREX1-203ENST00000456089 MYO1FO00160 1098 aa13.1□□□□□ -0.31
TREX1-203ENST00000456089 NEMP1O14524 444 aa13.1□□□□□ -0.31
TREX1-203ENST00000456089 CASC3O15234 703 aaKnown RBP13.1□□□□□ -0.31
TREX1-203ENST00000456089 AKR1B10O60218 316 aa13.1□□□□□ -0.31
TREX1-203ENST00000456089 BRINP1O60477 761 aa13.1□□□□□ -0.31
TREX1-203ENST00000456089 EIF4A3P38919 411 aaKnown RBP13.1□□□□□ -0.31
TREX1-203ENST00000456089 EIF2S3P41091 472 aaKnown RBP13.1□□□□□ -0.31
TREX1-203ENST00000456089 SSR1P43307 286 aaKnown RBP13.1□□□□□ -0.31
TREX1-203ENST00000456089 YBEYP58557 167 aaPredicted RBP13.1□□□□□ -0.31
TREX1-203ENST00000456089 PARP15Q460N3 678 aa13.1□□□□□ -0.31
TREX1-203ENST00000456089 PPP6R3Q5H9R7 873 aaPredicted RBP13.1□□□□□ -0.31
TREX1-203ENST00000456089 PSTKQ8IV42 348 aaKnown RBP13.1□□□□□ -0.31
TREX1-203ENST00000456089 OR2AP1Q8NGE2 309 aa13.1□□□□□ -0.31
TREX1-203ENST00000456089 EXOC2Q96KP1 924 aa13.1□□□□□ -0.31
TREX1-203ENST00000456089 KLF6Q99612 283 aaPredicted RBP13.1□□□□□ -0.31
TREX1-203ENST00000456089 NUP85Q9BW27 656 aa13.1□□□□□ -0.31
TREX1-203ENST00000456089 TRIM7Q9C029 511 aa13.1□□□□□ -0.31
TREX1-203ENST00000456089 TCEAL2Q9H3H9 227 aaPredicted RBP13.1□□□□□ -0.31
TREX1-203ENST00000456089 ZWILCHQ9H900 591 aa13.1□□□□□ -0.31
TREX1-203ENST00000456089 GPATCH2LQ9NWQ4 482 aa13.1□□□□□ -0.31
TREX1-203ENST00000456089 ANAPC7Q9UJX3 599 aa13.1□□□□□ -0.31
TREX1-203ENST00000456089 HS3ST3A1Q9Y663 406 aa13.1□□□□□ -0.31
TREX1-203ENST00000456089 U3KQA8 63 aa13.1□□□□□ -0.31
TREX1-203ENST00000456089 CXorf51AA0A1B0GTR3 108 aa13.09□□□□□ -0.31
TREX1-203ENST00000456089 K7ESM1 405 aa13.09□□□□□ -0.31
TREX1-203ENST00000456089 INSIG1O15503 277 aa13.09□□□□□ -0.31
TREX1-203ENST00000456089 KDELR3O43731 214 aa13.09□□□□□ -0.31
TREX1-203ENST00000456089 AP1G1O43747 822 aa13.09□□□□□ -0.31
TREX1-203ENST00000456089 MMP20O60882 483 aa13.09□□□□□ -0.31
TREX1-203ENST00000456089 TMCC1O94876 653 aa13.09□□□□□ -0.31
TREX1-203ENST00000456089 GSRP00390 522 aa13.09□□□□□ -0.31
TREX1-203ENST00000456089 MT-CO3P00414 261 aa13.09□□□□□ -0.31
TREX1-203ENST00000456089 CDK4P11802 303 aa13.09□□□□□ -0.31
TREX1-203ENST00000456089 HNRNPH3P31942 346 aaKnown RBP13.09□□□□□ -0.31
TREX1-203ENST00000456089 PCK1P35558 622 aa13.09□□□□□ -0.31
TREX1-203ENST00000456089 ARL4AP40617 200 aa13.09□□□□□ -0.31
TREX1-203ENST00000456089 ABCG1P45844 678 aa13.09□□□□□ -0.31
TREX1-203ENST00000456089 ZNF135P52742 658 aaPredicted RBP13.09□□□□□ -0.31
TREX1-203ENST00000456089 SNRPD1P62314 119 aaKnown RBP13.09□□□□□ -0.31
TREX1-203ENST00000456089 SGCGQ13326 291 aa13.09□□□□□ -0.31
TREX1-203ENST00000456089 ILKQ13418 452 aa13.09□□□□□ -0.31
TREX1-203ENST00000456089 PDE1CQ14123 709 aaPredicted RBP13.09□□□□□ -0.31
TREX1-203ENST00000456089 TCEA2Q15560 299 aa13.09□□□□□ -0.31
TREX1-203ENST00000456089 DEFB133Q30KQ1 61 aa13.09□□□□□ -0.31
TREX1-203ENST00000456089 MYLK3Q32MK0 819 aa13.09□□□□□ -0.31
TREX1-203ENST00000456089 BOLA3Q53S33 107 aa13.09□□□□□ -0.31
TREX1-203ENST00000456089 HS1BP3Q53T59 392 aa13.09□□□□□ -0.31
TREX1-203ENST00000456089 ZNF805Q5CZA5 627 aa13.09□□□□□ -0.31
TREX1-203ENST00000456089 KYAT3Q6YP21 454 aaKnown RBP13.09□□□□□ -0.31
TREX1-203ENST00000456089 CNGA4Q8IV77 575 aa13.09□□□□□ -0.31
TREX1-203ENST00000456089 RBFAQ8N0V3 343 aa13.09□□□□□ -0.31
TREX1-203ENST00000456089 ZNF548Q8NEK5 533 aaPredicted RBP13.09□□□□□ -0.31
TREX1-203ENST00000456089 CTNNBL1Q8WYA6 563 aaPredicted RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms