RNA–Protein interactions for RNA: ENST00000455727.6

LDLR-202, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-202ENST00000455727 YBEYP58557 167 aaPredicted RBP15.21■□□□□ 0.02
LDLR-202ENST00000455727 ILF2Q12905 390 aaKnown RBP15.21■□□□□ 0.02
LDLR-202ENST00000455727 DLG1Q12959 904 aa15.21■□□□□ 0.02
LDLR-202ENST00000455727 GPR17Q13304 367 aa15.21■□□□□ 0.02
LDLR-202ENST00000455727 BTG3Q14201 252 aaPredicted RBP15.21■□□□□ 0.02
LDLR-202ENST00000455727 ZRSR2Q15696 482 aaKnown RBP15.21■□□□□ 0.02
LDLR-202ENST00000455727 SLC14A2Q15849 920 aa15.21■□□□□ 0.02
LDLR-202ENST00000455727 TMCO4Q5TGY1 634 aa15.21■□□□□ 0.02
LDLR-202ENST00000455727 C1orf146Q5VVC0 180 aa15.21■□□□□ 0.02
LDLR-202ENST00000455727 AAGABQ6PD74 315 aa15.21■□□□□ 0.02
LDLR-202ENST00000455727 KDELC2Q7Z4H8 507 aa15.21■□□□□ 0.02
LDLR-202ENST00000455727 LMNTD2Q8IXW0 634 aa15.21■□□□□ 0.02
LDLR-202ENST00000455727 PHTF2Q8N3S3 785 aa15.21■□□□□ 0.02
LDLR-202ENST00000455727 IGSF8Q969P0 613 aa15.21■□□□□ 0.02
LDLR-202ENST00000455727 OMDQ99983 421 aa15.21■□□□□ 0.02
LDLR-202ENST00000455727 MAN1C1Q9NR34 630 aa15.21■□□□□ 0.02
LDLR-202ENST00000455727 NMRK1Q9NWW6 199 aa15.21■□□□□ 0.02
LDLR-202ENST00000455727 SRRDQ9UH36 339 aa15.21■□□□□ 0.02
LDLR-202ENST00000455727 MEI4A8MW99 385 aa15.2■□□□□ 0.02
LDLR-202ENST00000455727 GRID2O43424 1007 aa15.2■□□□□ 0.02
LDLR-202ENST00000455727 COX4I1P13073 169 aa15.2■□□□□ 0.02
LDLR-202ENST00000455727 AP2B1P63010 937 aa15.2■□□□□ 0.02
LDLR-202ENST00000455727 TAF10Q12962 218 aa15.2■□□□□ 0.02
LDLR-202ENST00000455727 MUM1Q2TAK8 710 aa15.2■□□□□ 0.02
LDLR-202ENST00000455727 FAM43BQ6ZT52 329 aaPredicted RBP15.2■□□□□ 0.02
LDLR-202ENST00000455727 LSMEM2Q8N112 164 aa15.2■□□□□ 0.02
LDLR-202ENST00000455727 SLC25A41Q8N5S1 370 aa15.2■□□□□ 0.02
LDLR-202ENST00000455727 TTC9BQ8N6N2 239 aa15.2■□□□□ 0.02
LDLR-202ENST00000455727 PSMG2Q969U7 264 aa15.2■□□□□ 0.02
LDLR-202ENST00000455727 PABPC5Q96DU9 382 aaKnown RBP15.2■□□□□ 0.02
LDLR-202ENST00000455727 OR52B2Q96RD2 323 aa15.2■□□□□ 0.02
LDLR-202ENST00000455727 RTKNQ9BST9 563 aa15.2■□□□□ 0.02
LDLR-202ENST00000455727 CCDC28BQ9BUN5 200 aa15.2■□□□□ 0.02
LDLR-202ENST00000455727 ARHGAP26Q9UNA1 814 aa15.2■□□□□ 0.02
LDLR-202ENST00000455727 MRPL42Q9Y6G3 142 aaKnown RBP15.2■□□□□ 0.02
LDLR-202ENST00000455727 BPTFQ12830 3046 aa15.2■□□□□ 0.02
LDLR-202ENST00000455727 LOC285095A0A1B0GVY8 99 aa15.2■□□□□ 0.02
LDLR-202ENST00000455727 E9PBE3 544 aa15.2■□□□□ 0.02
LDLR-202ENST00000455727 KLHL41O60662 606 aa15.2■□□□□ 0.02
LDLR-202ENST00000455727 RAMP2O60895 175 aa15.2■□□□□ 0.02
LDLR-202ENST00000455727 TBX18O95935 607 aa15.2■□□□□ 0.02
LDLR-202ENST00000455727 ALDH2P05091 517 aa15.2■□□□□ 0.02
LDLR-202ENST00000455727 HOXD10P28358 340 aa15.2■□□□□ 0.02
LDLR-202ENST00000455727 PBX3P40426 434 aa15.2■□□□□ 0.02
LDLR-202ENST00000455727 MAPKAPK2P49137 400 aa15.2■□□□□ 0.02
LDLR-202ENST00000455727 KPNA1P52294 538 aaPredicted RBP15.2■□□□□ 0.02
LDLR-202ENST00000455727 PGGT1BP53609 377 aa15.2■□□□□ 0.02
LDLR-202ENST00000455727 SESN3P58005 492 aa15.2■□□□□ 0.02
LDLR-202ENST00000455727 ITKQ08881 620 aa15.2■□□□□ 0.02
LDLR-202ENST00000455727 SERINC3Q13530 473 aa15.2■□□□□ 0.02
LDLR-202ENST00000455727 ZNF460Q14592 562 aa15.2■□□□□ 0.02
LDLR-202ENST00000455727 POLD3Q15054 466 aaPredicted RBP15.2■□□□□ 0.02
LDLR-202ENST00000455727 CNSTQ6PJW8 725 aa15.2■□□□□ 0.02
LDLR-202ENST00000455727 PIWIL4Q7Z3Z4 852 aaKnown RBP15.2■□□□□ 0.02
LDLR-202ENST00000455727 ABI1Q8IZP0 508 aa15.2■□□□□ 0.02
LDLR-202ENST00000455727 CPSF7Q8N684 471 aaKnown RBP15.2■□□□□ 0.02
LDLR-202ENST00000455727 PPFIBP2Q8ND30 876 aa15.2■□□□□ 0.02
LDLR-202ENST00000455727 OR13J1Q8NGT2 312 aa15.2■□□□□ 0.02
LDLR-202ENST00000455727 ARRDC2Q8TBH0 407 aa15.2■□□□□ 0.02
LDLR-202ENST00000455727 DTX3LQ8TDB6 740 aa15.2■□□□□ 0.02
LDLR-202ENST00000455727 TSPAN17Q96FV3 270 aa15.2■□□□□ 0.02
LDLR-202ENST00000455727 KLHL5Q96PQ7 755 aa15.2■□□□□ 0.02
LDLR-202ENST00000455727 GPR62Q9BZJ7 368 aa15.2■□□□□ 0.02
LDLR-202ENST00000455727 ZDHHC2Q9UIJ5 367 aa15.2■□□□□ 0.02
LDLR-202ENST00000455727 CHD5Q8TDI0 1954 aa15.19■□□□□ 0.02
LDLR-202ENST00000455727 TBC1D4O60343 1298 aa15.19■□□□□ 0.02
LDLR-202ENST00000455727 ZDHHC11BP0C7U3 371 aa15.19■□□□□ 0.02
LDLR-202ENST00000455727 ATP5F1P24539 256 aaPredicted RBP15.19■□□□□ 0.02
LDLR-202ENST00000455727 MAXP61244 160 aa15.19■□□□□ 0.02
LDLR-202ENST00000455727 DSC2Q02487 901 aa15.19■□□□□ 0.02
LDLR-202ENST00000455727 FAM83EQ2M2I3 478 aa15.19■□□□□ 0.02
LDLR-202ENST00000455727 C10orf120Q5SQS8 335 aa15.19■□□□□ 0.02
LDLR-202ENST00000455727 RASIP1Q5U651 963 aa15.19■□□□□ 0.02
LDLR-202ENST00000455727 RAP1GAP2Q684P5 730 aa15.19■□□□□ 0.02
LDLR-202ENST00000455727 FRMD7Q6ZUT3 714 aa15.19■□□□□ 0.02
LDLR-202ENST00000455727 ACAD11Q709F0 780 aa15.19■□□□□ 0.02
LDLR-202ENST00000455727 ADGRG6Q86SQ4 1221 aa15.19■□□□□ 0.02
LDLR-202ENST00000455727 GPR152Q8TDT2 470 aa15.19■□□□□ 0.02
LDLR-202ENST00000455727 C2orf15Q8WU43 125 aaKnown RBP15.19■□□□□ 0.02
LDLR-202ENST00000455727 HEXDCQ8WVB3 486 aa15.19■□□□□ 0.02
LDLR-202ENST00000455727 PEX13Q92968 403 aa15.19■□□□□ 0.02
LDLR-202ENST00000455727 CCDC126Q96EE4 140 aa15.19■□□□□ 0.02
LDLR-202ENST00000455727 IGSF5Q9NSI5 407 aa15.19■□□□□ 0.02
LDLR-202ENST00000455727 NCKIPSDQ9NZQ3 722 aa15.19■□□□□ 0.02
LDLR-202ENST00000455727 A0A1W2PQ45 241 aaPredicted RBP15.18■□□□□ 0.02
LDLR-202ENST00000455727 A0A1W2PQY0 241 aa15.18■□□□□ 0.02
LDLR-202ENST00000455727 MTMR11A4FU01 709 aa15.18■□□□□ 0.02
LDLR-202ENST00000455727 ENPP3O14638 875 aa15.18■□□□□ 0.02
LDLR-202ENST00000455727 THRAP10827 490 aa15.18■□□□□ 0.02
LDLR-202ENST00000455727 ANPEPP15144 967 aa15.18■□□□□ 0.02
LDLR-202ENST00000455727 ITGAXP20702 1163 aa15.18■□□□□ 0.02
LDLR-202ENST00000455727 LAMB3Q13751 1172 aa15.18■□□□□ 0.02
LDLR-202ENST00000455727 BLMHQ13867 455 aa15.18■□□□□ 0.02
LDLR-202ENST00000455727 IHHQ14623 411 aa15.18■□□□□ 0.02
LDLR-202ENST00000455727 RALGPS1Q5JS13 557 aa15.18■□□□□ 0.02
LDLR-202ENST00000455727 AGAP9Q5VTM2 703 aa15.18■□□□□ 0.02
LDLR-202ENST00000455727 LRRC8DQ7L1W4 858 aa15.18■□□□□ 0.02
LDLR-202ENST00000455727 MIB1Q86YT6 1006 aa15.18■□□□□ 0.02
LDLR-202ENST00000455727 CILP2Q8IUL8 1156 aa15.18■□□□□ 0.02
LDLR-202ENST00000455727 SCG3Q8WXD2 468 aaKnown RBP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms