RNA–Protein interactions for RNA: ENST00000455362.1

HMGB1P4-201, Transcript of high mobility group box 1 pseudogene 4, humanhuman

BASIC

Gene HMGB1P4, Length 567 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P4-201ENST00000455362 LNX1Q8TBB1 728 aaPredicted RBP5.37□□□□□ -1.55
HMGB1P4-201ENST00000455362 CCHCR1Q8TD31 782 aa5.37□□□□□ -1.55
HMGB1P4-201ENST00000455362 APBB2Q92870 758 aa5.37□□□□□ -1.55
HMGB1P4-201ENST00000455362 TBC1D31Q96DN5 1066 aa5.37□□□□□ -1.55
HMGB1P4-201ENST00000455362 TWNKQ96RR1 684 aa5.37□□□□□ -1.55
HMGB1P4-201ENST00000455362 GDF15Q99988 308 aa5.37□□□□□ -1.55
HMGB1P4-201ENST00000455362 FAM83CQ9BQN1 747 aa5.37□□□□□ -1.55
HMGB1P4-201ENST00000455362 ZNF518BQ9C0D4 1074 aa5.37□□□□□ -1.55
HMGB1P4-201ENST00000455362 SDCBP2Q9H190 292 aa5.37□□□□□ -1.55
HMGB1P4-201ENST00000455362 FAM124BQ9H5Z6 455 aaPredicted RBP5.37□□□□□ -1.55
HMGB1P4-201ENST00000455362 SMYD3Q9H7B4 428 aa5.37□□□□□ -1.55
HMGB1P4-201ENST00000455362 SYNCQ9H7C4 482 aa5.37□□□□□ -1.55
HMGB1P4-201ENST00000455362 GOLGA2P5Q9HBQ8 144 aa5.37□□□□□ -1.55
HMGB1P4-201ENST00000455362 NOD2Q9HC29 1040 aa5.37□□□□□ -1.55
HMGB1P4-201ENST00000455362 SLC38A7Q9NVC3 462 aa5.37□□□□□ -1.55
HMGB1P4-201ENST00000455362 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.37□□□□□ -1.55
HMGB1P4-201ENST00000455362 TMEM161AQ9NX61 479 aa5.37□□□□□ -1.55
HMGB1P4-201ENST00000455362 GDAP2Q9NXN4 497 aa5.37□□□□□ -1.55
HMGB1P4-201ENST00000455362 TFR2Q9UP52 801 aa5.37□□□□□ -1.55
HMGB1P4-201ENST00000455362 MTO1Q9Y2Z2 717 aaKnown RBP5.37□□□□□ -1.55
HMGB1P4-201ENST00000455362 HS3ST4Q9Y661 456 aa5.37□□□□□ -1.55
HMGB1P4-201ENST00000455362 ALPK3Q96L96 1907 aa5.36□□□□□ -1.55
HMGB1P4-201ENST00000455362 hCG_1807616A0A1W2PRN6 198 aa5.36□□□□□ -1.55
HMGB1P4-201ENST00000455362 KPNA7A9QM74 516 aa5.36□□□□□ -1.55
HMGB1P4-201ENST00000455362 H3BS24 57 aa5.36□□□□□ -1.55
HMGB1P4-201ENST00000455362 PYCARD-AS1I3L0S3 204 aa5.36□□□□□ -1.55
HMGB1P4-201ENST00000455362 ACOT7O00154 380 aa5.36□□□□□ -1.55
HMGB1P4-201ENST00000455362 GTPBP1O00178 669 aaKnown RBP5.36□□□□□ -1.55
HMGB1P4-201ENST00000455362 RTN2O75298 545 aa5.36□□□□□ -1.55
HMGB1P4-201ENST00000455362 USP1O94782 785 aa5.36□□□□□ -1.55
HMGB1P4-201ENST00000455362 SCGB1D1O95968 90 aa5.36□□□□□ -1.55
HMGB1P4-201ENST00000455362 POMCP01189 267 aa5.36□□□□□ -1.55
HMGB1P4-201ENST00000455362 AHSGP02765 367 aa5.36□□□□□ -1.55
HMGB1P4-201ENST00000455362 TK1P04183 234 aa5.36□□□□□ -1.55
HMGB1P4-201ENST00000455362 NTRK1P04629 796 aa5.36□□□□□ -1.55
HMGB1P4-201ENST00000455362 PAEPP09466 180 aa5.36□□□□□ -1.55
HMGB1P4-201ENST00000455362 GZMAP12544 262 aa5.36□□□□□ -1.55
HMGB1P4-201ENST00000455362 PORP16435 677 aaPredicted RBP5.36□□□□□ -1.55
HMGB1P4-201ENST00000455362 CD58P19256 250 aa5.36□□□□□ -1.55
HMGB1P4-201ENST00000455362 IGFBP6P24592 240 aaPredicted RBP5.36□□□□□ -1.55
HMGB1P4-201ENST00000455362 ITGB8P26012 769 aa5.36□□□□□ -1.55
HMGB1P4-201ENST00000455362 GABRB3P28472 473 aa5.36□□□□□ -1.55
HMGB1P4-201ENST00000455362 ECHS1P30084 290 aa5.36□□□□□ -1.55
HMGB1P4-201ENST00000455362 ADSLP30566 484 aaPredicted RBP5.36□□□□□ -1.55
HMGB1P4-201ENST00000455362 RFC2P35250 354 aa5.36□□□□□ -1.55
HMGB1P4-201ENST00000455362 ARL3P36405 182 aa5.36□□□□□ -1.55
HMGB1P4-201ENST00000455362 RAP1GAPP47736 663 aa5.36□□□□□ -1.55
HMGB1P4-201ENST00000455362 TAF6P49848 677 aa5.36□□□□□ -1.55
HMGB1P4-201ENST00000455362 CLCN7P51798 805 aa5.36□□□□□ -1.55
HMGB1P4-201ENST00000455362 VAV2P52735 878 aa5.36□□□□□ -1.55
HMGB1P4-201ENST00000455362 RAD23BP54727 409 aa5.36□□□□□ -1.55
HMGB1P4-201ENST00000455362 GALCP54803 685 aa5.36□□□□□ -1.55
HMGB1P4-201ENST00000455362 TNNC1P63316 161 aa5.36□□□□□ -1.55
HMGB1P4-201ENST00000455362 TLE1Q04724 770 aa5.36□□□□□ -1.55
HMGB1P4-201ENST00000455362 INCA1Q0VD86 236 aa5.36□□□□□ -1.55
HMGB1P4-201ENST00000455362 KIF5AQ12840 1032 aa5.36□□□□□ -1.55
HMGB1P4-201ENST00000455362 GRIK3Q13003 919 aa5.36□□□□□ -1.55
HMGB1P4-201ENST00000455362 PTPN14Q15678 1187 aa5.36□□□□□ -1.55
HMGB1P4-201ENST00000455362 UPP1Q16831 310 aa5.36□□□□□ -1.55
HMGB1P4-201ENST00000455362 SOWAHAQ2M3V2 549 aa5.36□□□□□ -1.55
HMGB1P4-201ENST00000455362 NOMO2Q5JPE7 1267 aa5.36□□□□□ -1.55
HMGB1P4-201ENST00000455362 CLLU1OSQ5K130 101 aa5.36□□□□□ -1.55
HMGB1P4-201ENST00000455362 ATPAF1Q5TC12 328 aaPredicted RBP5.36□□□□□ -1.55
HMGB1P4-201ENST00000455362 TAF3Q5VWG9 929 aa5.36□□□□□ -1.55
HMGB1P4-201ENST00000455362 CD300LGQ6UXG3 332 aa5.36□□□□□ -1.55
HMGB1P4-201ENST00000455362 FAM47EQ6ZV65 393 aa5.36□□□□□ -1.55
HMGB1P4-201ENST00000455362 TMPRSS7Q7RTY8 843 aa5.36□□□□□ -1.55
HMGB1P4-201ENST00000455362 DEFB128Q7Z7B8 93 aa5.36□□□□□ -1.55
HMGB1P4-201ENST00000455362 CPLX4Q7Z7G2 160 aa5.36□□□□□ -1.55
HMGB1P4-201ENST00000455362 KIAA1328Q86T90 577 aa5.36□□□□□ -1.55
HMGB1P4-201ENST00000455362 ZNF677Q86XU0 584 aa5.36□□□□□ -1.55
HMGB1P4-201ENST00000455362 PALB2Q86YC2 1186 aa5.36□□□□□ -1.55
HMGB1P4-201ENST00000455362 ARMC8Q8IUR7 673 aa5.36□□□□□ -1.55
HMGB1P4-201ENST00000455362 SLC44A2Q8IWA5 706 aaPredicted RBP5.36□□□□□ -1.55
HMGB1P4-201ENST00000455362 PLD6Q8N2A8 252 aaKnown RBP5.36□□□□□ -1.55
HMGB1P4-201ENST00000455362 MPP5Q8N3R9 675 aa5.36□□□□□ -1.55
HMGB1P4-201ENST00000455362 TTC39CQ8N584 583 aa5.36□□□□□ -1.55
HMGB1P4-201ENST00000455362 SLC4A11Q8NBS3 891 aa5.36□□□□□ -1.55
HMGB1P4-201ENST00000455362 CSGALNACT1Q8TDX6 532 aa5.36□□□□□ -1.55
HMGB1P4-201ENST00000455362 ZNF606Q8WXB4 792 aa5.36□□□□□ -1.55
HMGB1P4-201ENST00000455362 TFAP2BQ92481 460 aa5.36□□□□□ -1.55
HMGB1P4-201ENST00000455362 MAML1Q92585 1016 aa5.36□□□□□ -1.55
HMGB1P4-201ENST00000455362 SDCCAG3Q96C92 435 aa5.36□□□□□ -1.55
HMGB1P4-201ENST00000455362 RNF125Q96EQ8 232 aa5.36□□□□□ -1.55
HMGB1P4-201ENST00000455362 TRAPPC9Q96Q05 1148 aa5.36□□□□□ -1.55
HMGB1P4-201ENST00000455362 MMS19Q96T76 1030 aa5.36□□□□□ -1.55
HMGB1P4-201ENST00000455362 PCDHB18PQ96TA0 734 aa5.36□□□□□ -1.55
HMGB1P4-201ENST00000455362 ZSWIM1Q9BR11 485 aa5.36□□□□□ -1.55
HMGB1P4-201ENST00000455362 RTKNQ9BST9 563 aa5.36□□□□□ -1.55
HMGB1P4-201ENST00000455362 DDX23Q9BUQ8 820 aaKnown RBP5.36□□□□□ -1.55
HMGB1P4-201ENST00000455362 ELOVL4Q9GZR5 314 aa5.36□□□□□ -1.55
HMGB1P4-201ENST00000455362 ISCUQ9H1K1 167 aa5.36□□□□□ -1.55
HMGB1P4-201ENST00000455362 MRPL46Q9H2W6 279 aaKnown RBP5.36□□□□□ -1.55
HMGB1P4-201ENST00000455362 PABPC3Q9H361 631 aaKnown RBP5.36□□□□□ -1.55
HMGB1P4-201ENST00000455362 LZTFL1Q9NQ48 299 aa5.36□□□□□ -1.55
HMGB1P4-201ENST00000455362 ABCF3Q9NUQ8 709 aa5.36□□□□□ -1.55
HMGB1P4-201ENST00000455362 TAS2R14Q9NYV8 317 aa5.36□□□□□ -1.55
HMGB1P4-201ENST00000455362 KIAA1257Q9ULG3 409 aa5.36□□□□□ -1.55
HMGB1P4-201ENST00000455362 BARX2Q9UMQ3 279 aaPredicted RBP5.36□□□□□ -1.55
HMGB1P4-201ENST00000455362 TMEM5Q9Y2B1 443 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms