RNA–Protein interactions for RNA: ENST00000454244.4

LMCD1-205, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2 BASIC

Gene LMCD1, Length 1,113 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-205ENST00000454244 CASP14P31944 242 aa10.89□□□□□ -0.67
LMCD1-205ENST00000454244 ARL4AP40617 200 aa10.89□□□□□ -0.67
LMCD1-205ENST00000454244 RGRP47804 291 aa10.89□□□□□ -0.67
LMCD1-205ENST00000454244 HCAR3P49019 387 aa10.89□□□□□ -0.67
LMCD1-205ENST00000454244 ACADVLP49748 655 aa10.89□□□□□ -0.67
LMCD1-205ENST00000454244 DPYSQ14117 519 aa10.89□□□□□ -0.67
LMCD1-205ENST00000454244 FZD2Q14332 565 aa10.89□□□□□ -0.67
LMCD1-205ENST00000454244 PIGHQ14442 188 aaPredicted RBP10.89□□□□□ -0.67
LMCD1-205ENST00000454244 DPYSL2Q16555 572 aa10.89□□□□□ -0.67
LMCD1-205ENST00000454244 SKOR2Q2VWA4 1001 aaPredicted RBP10.89□□□□□ -0.67
LMCD1-205ENST00000454244 BOLA3Q53S33 107 aa10.89□□□□□ -0.67
LMCD1-205ENST00000454244 CCDC122Q5T0U0 273 aa10.89□□□□□ -0.67
LMCD1-205ENST00000454244 TXNRD3NBQ6F5E7 133 aa10.89□□□□□ -0.67
LMCD1-205ENST00000454244 ALKBH5Q6P6C2 394 aaKnown RBP10.89□□□□□ -0.67
LMCD1-205ENST00000454244 KDM7AQ6ZMT4 941 aa10.89□□□□□ -0.67
LMCD1-205ENST00000454244 ARHGAP36Q6ZRI8 547 aa10.89□□□□□ -0.67
LMCD1-205ENST00000454244 DCP2Q8IU60 420 aaKnown RBP10.89□□□□□ -0.67
LMCD1-205ENST00000454244 TP53INP2Q8IXH6 220 aa10.89□□□□□ -0.67
LMCD1-205ENST00000454244 GALNT15Q8N3T1 639 aa10.89□□□□□ -0.67
LMCD1-205ENST00000454244 SLC25A45Q8N413 288 aa10.89□□□□□ -0.67
LMCD1-205ENST00000454244 DENND6BQ8NEG7 585 aa10.89□□□□□ -0.67
LMCD1-205ENST00000454244 CXorf40AQ8TE69 158 aa10.89□□□□□ -0.67
LMCD1-205ENST00000454244 ASB12Q8WXK4 309 aa10.89□□□□□ -0.67
LMCD1-205ENST00000454244 TSC1Q92574 1164 aa10.89□□□□□ -0.67
LMCD1-205ENST00000454244 HSPH1Q92598 858 aa10.89□□□□□ -0.67
LMCD1-205ENST00000454244 LENG8Q96PV6 779 aaPredicted RBP10.89□□□□□ -0.67
LMCD1-205ENST00000454244 WRAP53Q9BUR4 548 aaKnown RBP10.89□□□□□ -0.67
LMCD1-205ENST00000454244 NUP85Q9BW27 656 aa10.89□□□□□ -0.67
LMCD1-205ENST00000454244 CPEB1Q9BZB8 566 aaKnown RBP10.89□□□□□ -0.67
LMCD1-205ENST00000454244 SUV39H2Q9H5I1 410 aa10.89□□□□□ -0.67
LMCD1-205ENST00000454244 GPR27Q9NS67 375 aa10.89□□□□□ -0.67
LMCD1-205ENST00000454244 DNAJC28Q9NX36 388 aa10.89□□□□□ -0.67
LMCD1-205ENST00000454244 IP6K2Q9UHH9 426 aa10.89□□□□□ -0.67
LMCD1-205ENST00000454244 IPO11Q9UI26 975 aaKnown RBP10.89□□□□□ -0.67
LMCD1-205ENST00000454244 ANAPC7Q9UJX3 599 aa10.89□□□□□ -0.67
LMCD1-205ENST00000454244 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.89□□□□□ -0.67
LMCD1-205ENST00000454244 FFAR2O15552 330 aa10.88□□□□□ -0.67
LMCD1-205ENST00000454244 SIGLEC6O43699 453 aa10.88□□□□□ -0.67
LMCD1-205ENST00000454244 BUB1BO60566 1050 aaPredicted RBP10.88□□□□□ -0.67
LMCD1-205ENST00000454244 PIAS2O75928 621 aa10.88□□□□□ -0.67
LMCD1-205ENST00000454244 TM7SF2O76062 418 aa10.88□□□□□ -0.67
LMCD1-205ENST00000454244 CYP1A2P05177 515 aa10.88□□□□□ -0.67
LMCD1-205ENST00000454244 TPM3P06753 285 aa10.88□□□□□ -0.67
LMCD1-205ENST00000454244 CKMT2P17540 419 aa10.88□□□□□ -0.67
LMCD1-205ENST00000454244 EIF4A3P38919 411 aaKnown RBP10.88□□□□□ -0.67
LMCD1-205ENST00000454244 RABIFP47224 123 aa10.88□□□□□ -0.67
LMCD1-205ENST00000454244 CLDN6P56747 220 aa10.88□□□□□ -0.67
LMCD1-205ENST00000454244 IL10RBQ08334 325 aa10.88□□□□□ -0.67
LMCD1-205ENST00000454244 PDE1CQ14123 709 aaPredicted RBP10.88□□□□□ -0.67
LMCD1-205ENST00000454244 GRM3Q14832 879 aa10.88□□□□□ -0.67
LMCD1-205ENST00000454244 SMAD1Q15797 465 aaKnown RBP10.88□□□□□ -0.67
LMCD1-205ENST00000454244 PROX2Q3B8N5 592 aa10.88□□□□□ -0.67
LMCD1-205ENST00000454244 TMEM52BQ4KMG9 183 aa10.88□□□□□ -0.67
LMCD1-205ENST00000454244 TPRG1LQ5T0D9 272 aa10.88□□□□□ -0.67
LMCD1-205ENST00000454244 CFAP58Q5T655 872 aa10.88□□□□□ -0.67
LMCD1-205ENST00000454244 POLNQ7Z5Q5 900 aa10.88□□□□□ -0.67
LMCD1-205ENST00000454244 SRLQ86TD4 932 aa10.88□□□□□ -0.67
LMCD1-205ENST00000454244 CAMK1DQ8IU85 385 aa10.88□□□□□ -0.67
LMCD1-205ENST00000454244 LZTR1Q8N653 840 aa10.88□□□□□ -0.67
LMCD1-205ENST00000454244 TSEN2Q8NCE0 465 aaKnown RBP10.88□□□□□ -0.67
LMCD1-205ENST00000454244 IFT43Q96FT9 208 aa10.88□□□□□ -0.67
LMCD1-205ENST00000454244 CSPG4P5Q96PW8 444 aa10.88□□□□□ -0.67
LMCD1-205ENST00000454244 CINPQ9BW66 212 aaPredicted RBP10.88□□□□□ -0.67
LMCD1-205ENST00000454244 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.88□□□□□ -0.67
LMCD1-205ENST00000454244 ETNK2Q9NVF9 386 aa10.88□□□□□ -0.67
LMCD1-205ENST00000454244 CHD5Q8TDI0 1954 aa10.87□□□□□ -0.67
LMCD1-205ENST00000454244 SPTY2D1-AS1A0A0U1RR47 76 aa10.87□□□□□ -0.67
LMCD1-205ENST00000454244 TSPAN11A1L157 253 aa10.87□□□□□ -0.67
LMCD1-205ENST00000454244 SRRM3A6NNA2 597 aaPredicted RBP10.87□□□□□ -0.67
LMCD1-205ENST00000454244 MYO1FO00160 1098 aa10.87□□□□□ -0.67
LMCD1-205ENST00000454244 TAF4O00268 1085 aa10.87□□□□□ -0.67
LMCD1-205ENST00000454244 MUSKO15146 869 aa10.87□□□□□ -0.67
LMCD1-205ENST00000454244 CAPNS1P04632 268 aa10.87□□□□□ -0.67
LMCD1-205ENST00000454244 PRKCGP05129 697 aa10.87□□□□□ -0.67
LMCD1-205ENST00000454244 C1SP09871 688 aa10.87□□□□□ -0.67
LMCD1-205ENST00000454244 IGFALSP35858 605 aa10.87□□□□□ -0.67
LMCD1-205ENST00000454244 SSR1P43307 286 aaKnown RBP10.87□□□□□ -0.67
LMCD1-205ENST00000454244 CSNK1DP48730 415 aa10.87□□□□□ -0.67
LMCD1-205ENST00000454244 SUOXP51687 545 aa10.87□□□□□ -0.67
LMCD1-205ENST00000454244 PFN3P60673 137 aa10.87□□□□□ -0.67
LMCD1-205ENST00000454244 HNRNPKP61978 463 aaKnown RBP eCLIP10.87□□□□□ -0.67
LMCD1-205ENST00000454244 DAB2P98082 770 aa10.87□□□□□ -0.67
LMCD1-205ENST00000454244 SEMG2Q02383 582 aa10.87□□□□□ -0.67
LMCD1-205ENST00000454244 SLC25A11Q02978 314 aaKnown RBP10.87□□□□□ -0.67
LMCD1-205ENST00000454244 ELP6Q0PNE2 266 aa10.87□□□□□ -0.67
LMCD1-205ENST00000454244 ZNF211Q13398 564 aaPredicted RBP10.87□□□□□ -0.67
LMCD1-205ENST00000454244 RFTN1Q14699 578 aaPredicted RBP10.87□□□□□ -0.67
LMCD1-205ENST00000454244 UGP2Q16851 508 aa10.87□□□□□ -0.67
LMCD1-205ENST00000454244 HS1BP3Q53T59 392 aa10.87□□□□□ -0.67
LMCD1-205ENST00000454244 BRAT1Q6PJG6 821 aa10.87□□□□□ -0.67
LMCD1-205ENST00000454244 TMCO3Q6UWJ1 677 aa10.87□□□□□ -0.67
LMCD1-205ENST00000454244 PARGQ86W56 976 aa10.87□□□□□ -0.67
LMCD1-205ENST00000454244 ZSWIM9Q86XI8 627 aa10.87□□□□□ -0.67
LMCD1-205ENST00000454244 PAF1Q8N7H5 531 aa10.87□□□□□ -0.67
LMCD1-205ENST00000454244 NIPA2Q8N8Q9 360 aa10.87□□□□□ -0.67
LMCD1-205ENST00000454244 TP53I13Q8NBR0 393 aaPredicted RBP10.87□□□□□ -0.67
LMCD1-205ENST00000454244 OR4C6Q8NH72 309 aa10.87□□□□□ -0.67
LMCD1-205ENST00000454244 HCAR2Q8TDS4 363 aa10.87□□□□□ -0.67
LMCD1-205ENST00000454244 TEKT4Q8WW24 435 aa10.87□□□□□ -0.67
LMCD1-205ENST00000454244 CENPTQ96BT3 561 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms