RNA–Protein interactions for RNA: ENST00000454233.6

DDX39A-203, Transcript of DExD-box helicase 39A, humanhuman

TSL 3 BASIC

Gene DDX39A, Length 922 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-203ENST00000454233 PAF1Q8N7H5 531 aa10.81□□□□□ -0.68
DDX39A-203ENST00000454233 KDF1Q8NAX2 398 aaPredicted RBP10.81□□□□□ -0.68
DDX39A-203ENST00000454233 DENND6BQ8NEG7 585 aa10.81□□□□□ -0.68
DDX39A-203ENST00000454233 HCAR2Q8TDS4 363 aa10.81□□□□□ -0.68
DDX39A-203ENST00000454233 TEKT4Q8WW24 435 aa10.81□□□□□ -0.68
DDX39A-203ENST00000454233 ZCCHC14Q8WYQ9 949 aaKnown RBP10.81□□□□□ -0.68
DDX39A-203ENST00000454233 HSPH1Q92598 858 aa10.81□□□□□ -0.68
DDX39A-203ENST00000454233 IFT43Q96FT9 208 aa10.81□□□□□ -0.68
DDX39A-203ENST00000454233 BMFQ96LC9 184 aa10.81□□□□□ -0.68
DDX39A-203ENST00000454233 ZNF641Q96N77 438 aaPredicted RBP10.81□□□□□ -0.68
DDX39A-203ENST00000454233 TUBGCP5Q96RT8 1024 aa10.81□□□□□ -0.68
DDX39A-203ENST00000454233 NUP85Q9BW27 656 aa10.81□□□□□ -0.68
DDX39A-203ENST00000454233 CINPQ9BW66 212 aaPredicted RBP10.81□□□□□ -0.68
DDX39A-203ENST00000454233 C1QTNF7Q9BXJ2 289 aa10.81□□□□□ -0.68
DDX39A-203ENST00000454233 TSPY26PQ9H489 355 aa10.81□□□□□ -0.68
DDX39A-203ENST00000454233 SUV39H2Q9H5I1 410 aa10.81□□□□□ -0.68
DDX39A-203ENST00000454233 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.81□□□□□ -0.68
DDX39A-203ENST00000454233 CWC15Q9P013 229 aaKnown RBP10.81□□□□□ -0.68
DDX39A-203ENST00000454233 IPO11Q9UI26 975 aaKnown RBP10.81□□□□□ -0.68
DDX39A-203ENST00000454233 GGT7Q9UJ14 662 aa10.81□□□□□ -0.68
DDX39A-203ENST00000454233 PCDHGA1Q9Y5H4 931 aa10.81□□□□□ -0.68
DDX39A-203ENST00000454233 COL5A1P20908 1838 aaPredicted RBP10.81□□□□□ -0.68
DDX39A-203ENST00000454233 POM121BA6NF01 834 aa10.8□□□□□ -0.68
DDX39A-203ENST00000454233 H3BM21 787 aa10.8□□□□□ -0.68
DDX39A-203ENST00000454233 RAD51BO15315 384 aa10.8□□□□□ -0.68
DDX39A-203ENST00000454233 INSIG1O15503 277 aa10.8□□□□□ -0.68
DDX39A-203ENST00000454233 RFPL3O75679 317 aa10.8□□□□□ -0.68
DDX39A-203ENST00000454233 TM7SF2O76062 418 aa10.8□□□□□ -0.68
DDX39A-203ENST00000454233 PIGNO95427 931 aa10.8□□□□□ -0.68
DDX39A-203ENST00000454233 C1SP09871 688 aa10.8□□□□□ -0.68
DDX39A-203ENST00000454233 RARAP10276 462 aa10.8□□□□□ -0.68
DDX39A-203ENST00000454233 ALPPL2P10696 532 aa10.8□□□□□ -0.68
DDX39A-203ENST00000454233 TIMP2P16035 220 aa10.8□□□□□ -0.68
DDX39A-203ENST00000454233 DGKAP23743 735 aa10.8□□□□□ -0.68
DDX39A-203ENST00000454233 IL1R2P27930 398 aa10.8□□□□□ -0.68
DDX39A-203ENST00000454233 SERPINA4P29622 427 aa10.8□□□□□ -0.68
DDX39A-203ENST00000454233 SSR1P43307 286 aaKnown RBP10.8□□□□□ -0.68
DDX39A-203ENST00000454233 CSNK1DP48730 415 aa10.8□□□□□ -0.68
DDX39A-203ENST00000454233 RENBPP51606 427 aa10.8□□□□□ -0.68
DDX39A-203ENST00000454233 IL10RBQ08334 325 aa10.8□□□□□ -0.68
DDX39A-203ENST00000454233 DPYSQ14117 519 aa10.8□□□□□ -0.68
DDX39A-203ENST00000454233 KRT81Q14533 505 aa10.8□□□□□ -0.68
DDX39A-203ENST00000454233 HADHQ16836 314 aaKnown RBP10.8□□□□□ -0.68
DDX39A-203ENST00000454233 LRRC73Q5JTD7 316 aa10.8□□□□□ -0.68
DDX39A-203ENST00000454233 SPECC1LQ69YQ0 1117 aa10.8□□□□□ -0.68
DDX39A-203ENST00000454233 ERAP2Q6P179 960 aa10.8□□□□□ -0.68
DDX39A-203ENST00000454233 BRAT1Q6PJG6 821 aa10.8□□□□□ -0.68
DDX39A-203ENST00000454233 TMCO3Q6UWJ1 677 aa10.8□□□□□ -0.68
DDX39A-203ENST00000454233 DHRS13Q6UX07 377 aa10.8□□□□□ -0.68
DDX39A-203ENST00000454233 KANSL1Q7Z3B3 1105 aa10.8□□□□□ -0.68
DDX39A-203ENST00000454233 SRLQ86TD4 932 aa10.8□□□□□ -0.68
DDX39A-203ENST00000454233 NPWQ8N729 165 aa10.8□□□□□ -0.68
DDX39A-203ENST00000454233 NIPA2Q8N8Q9 360 aa10.8□□□□□ -0.68
DDX39A-203ENST00000454233 BTBD6Q96KE9 485 aa10.8□□□□□ -0.68
DDX39A-203ENST00000454233 DEF6Q9H4E7 631 aa10.8□□□□□ -0.68
DDX39A-203ENST00000454233 ATP13A3Q9H7F0 1226 aa10.8□□□□□ -0.68
DDX39A-203ENST00000454233 ZNHIT6Q9NWK9 470 aaKnown RBP10.8□□□□□ -0.68
DDX39A-203ENST00000454233 DNAJC28Q9NX36 388 aa10.8□□□□□ -0.68
DDX39A-203ENST00000454233 ZMIZ1Q9ULJ6 1067 aa10.8□□□□□ -0.68
DDX39A-203ENST00000454233 SPTY2D1-AS1A0A0U1RR47 76 aa10.79□□□□□ -0.68
DDX39A-203ENST00000454233 NEMP2A6NFY4 417 aa10.79□□□□□ -0.68
DDX39A-203ENST00000454233 SPINT1O43278 529 aa10.79□□□□□ -0.68
DDX39A-203ENST00000454233 MMP20O60882 483 aa10.79□□□□□ -0.68
DDX39A-203ENST00000454233 PIAS2O75928 621 aa10.79□□□□□ -0.68
DDX39A-203ENST00000454233 TCF4P15884 667 aa10.79□□□□□ -0.68
DDX39A-203ENST00000454233 CKMT2P17540 419 aa10.79□□□□□ -0.68
DDX39A-203ENST00000454233 AMPD1P23109 780 aa10.79□□□□□ -0.68
DDX39A-203ENST00000454233 HNRNPH3P31942 346 aaKnown RBP10.79□□□□□ -0.68
DDX39A-203ENST00000454233 SERPINB6P35237 376 aa10.79□□□□□ -0.68
DDX39A-203ENST00000454233 EIF4A3P38919 411 aaKnown RBP10.79□□□□□ -0.68
DDX39A-203ENST00000454233 ACADVLP49748 655 aa10.79□□□□□ -0.68
DDX39A-203ENST00000454233 THOP1P52888 689 aa10.79□□□□□ -0.68
DDX39A-203ENST00000454233 HNRNPKP61978 463 aaKnown RBP eCLIP10.79□□□□□ -0.68
DDX39A-203ENST00000454233 DAB2P98082 770 aa10.79□□□□□ -0.68
DDX39A-203ENST00000454233 BCL2L1Q07817 233 aa10.79□□□□□ -0.68
DDX39A-203ENST00000454233 DNAJC3Q13217 504 aa10.79□□□□□ -0.68
DDX39A-203ENST00000454233 PDE1CQ14123 709 aaPredicted RBP10.79□□□□□ -0.68
DDX39A-203ENST00000454233 ZNF235Q14590 738 aa10.79□□□□□ -0.68
DDX39A-203ENST00000454233 UGP2Q16851 508 aa10.79□□□□□ -0.68
DDX39A-203ENST00000454233 TMEM52BQ4KMG9 183 aa10.79□□□□□ -0.68
DDX39A-203ENST00000454233 TMCO4Q5TGY1 634 aa10.79□□□□□ -0.68
DDX39A-203ENST00000454233 POLNQ7Z5Q5 900 aa10.79□□□□□ -0.68
DDX39A-203ENST00000454233 PARGQ86W56 976 aa10.79□□□□□ -0.68
DDX39A-203ENST00000454233 CAMK1DQ8IU85 385 aa10.79□□□□□ -0.68
DDX39A-203ENST00000454233 SLC22A18ASQ8N1D0 253 aa10.79□□□□□ -0.68
DDX39A-203ENST00000454233 BBS5Q8N3I7 341 aa10.79□□□□□ -0.68
DDX39A-203ENST00000454233 TSEN2Q8NCE0 465 aaKnown RBP10.79□□□□□ -0.68
DDX39A-203ENST00000454233 OR8K1Q8NGG5 319 aa10.79□□□□□ -0.68
DDX39A-203ENST00000454233 ZNF564Q8TBZ8 553 aaPredicted RBP10.79□□□□□ -0.68
DDX39A-203ENST00000454233 NSMCE1Q8WV22 266 aa10.79□□□□□ -0.68
DDX39A-203ENST00000454233 CTNNBL1Q8WYA6 563 aaPredicted RBP10.79□□□□□ -0.68
DDX39A-203ENST00000454233 VOPP1Q96AW1 172 aa10.79□□□□□ -0.68
DDX39A-203ENST00000454233 ZNF599Q96NL3 588 aa10.79□□□□□ -0.68
DDX39A-203ENST00000454233 CSPG4P5Q96PW8 444 aa10.79□□□□□ -0.68
DDX39A-203ENST00000454233 KLF6Q99612 283 aaPredicted RBP10.79□□□□□ -0.68
DDX39A-203ENST00000454233 WRAP53Q9BUR4 548 aaKnown RBP10.79□□□□□ -0.68
DDX39A-203ENST00000454233 CTTNBP2NLQ9P2B4 639 aa10.79□□□□□ -0.68
DDX39A-203ENST00000454233 SEPT3Q9UH03 358 aa10.79□□□□□ -0.68
DDX39A-203ENST00000454233 LCMT1Q9UIC8 334 aa10.79□□□□□ -0.68
DDX39A-203ENST00000454233 TSPAN11A1L157 253 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms