RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 MC1RQ01726 317 aa5.44□□□□□ -1.54
SBDSP1-204ENST00000453858 MAP4K2Q12851 820 aa5.44□□□□□ -1.54
SBDSP1-204ENST00000453858 STAT4Q14765 748 aa5.44□□□□□ -1.54
SBDSP1-204ENST00000453858 EIF4HQ15056 248 aaKnown RBP5.44□□□□□ -1.54
SBDSP1-204ENST00000453858 PLEKHN1Q494U1 663 aaPredicted RBP5.44□□□□□ -1.54
SBDSP1-204ENST00000453858 VWA2Q5GFL6 755 aa5.44□□□□□ -1.54
SBDSP1-204ENST00000453858 HLA-DQA1Q5Y7H0 255 aa5.44□□□□□ -1.54
SBDSP1-204ENST00000453858 ZNF776Q68DI1 518 aaPredicted RBP5.44□□□□□ -1.54
SBDSP1-204ENST00000453858 FAM171BQ6P995 826 aa5.44□□□□□ -1.54
SBDSP1-204ENST00000453858 DENND5BQ6ZUT9 1274 aa5.44□□□□□ -1.54
SBDSP1-204ENST00000453858 SPATC1Q76KD6 591 aa5.44□□□□□ -1.54
SBDSP1-204ENST00000453858 MAEAQ7L5Y9 396 aa5.44□□□□□ -1.54
SBDSP1-204ENST00000453858 TMEM135Q86UB9 458 aa5.44□□□□□ -1.54
SBDSP1-204ENST00000453858 WFDC3Q8IUB2 231 aa5.44□□□□□ -1.54
SBDSP1-204ENST00000453858 ZC3H3Q8IXZ2 948 aaKnown RBP5.44□□□□□ -1.54
SBDSP1-204ENST00000453858 MB21D2Q8IYB1 491 aaPredicted RBP5.44□□□□□ -1.54
SBDSP1-204ENST00000453858 UNC5BQ8IZJ1 945 aa5.44□□□□□ -1.54
SBDSP1-204ENST00000453858 CISD2Q8N5K1 135 aaKnown RBP5.44□□□□□ -1.54
SBDSP1-204ENST00000453858 ANKS4BQ8N8V4 417 aa5.44□□□□□ -1.54
SBDSP1-204ENST00000453858 ST6GALNAC3Q8NDV1 305 aa5.44□□□□□ -1.54
SBDSP1-204ENST00000453858 ZSWIM2Q8NEG5 633 aa5.44□□□□□ -1.54
SBDSP1-204ENST00000453858 OR6B3Q8NGW1 331 aa5.44□□□□□ -1.54
SBDSP1-204ENST00000453858 UCMAQ8WVF2 138 aa5.44□□□□□ -1.54
SBDSP1-204ENST00000453858 KCTD13Q8WZ19 329 aa5.44□□□□□ -1.54
SBDSP1-204ENST00000453858 STARD8Q92502 1023 aa5.44□□□□□ -1.54
SBDSP1-204ENST00000453858 HAS1Q92839 578 aa5.44□□□□□ -1.54
SBDSP1-204ENST00000453858 RELTQ969Z4 430 aa5.44□□□□□ -1.54
SBDSP1-204ENST00000453858 PNPLA2Q96AD5 504 aa5.44□□□□□ -1.54
SBDSP1-204ENST00000453858 FUBP3Q96I24 572 aaKnown RBP eCLIP5.44□□□□□ -1.54
SBDSP1-204ENST00000453858 ZBTB45Q96K62 511 aaPredicted RBP5.44□□□□□ -1.54
SBDSP1-204ENST00000453858 NOX5Q96PH1 765 aa5.44□□□□□ -1.54
SBDSP1-204ENST00000453858 TAAR9Q96RI9 348 aa5.44□□□□□ -1.54
SBDSP1-204ENST00000453858 GFM1Q96RP9 751 aaKnown RBP5.44□□□□□ -1.54
SBDSP1-204ENST00000453858 ACBD6Q9BR61 282 aa5.44□□□□□ -1.54
SBDSP1-204ENST00000453858 MTG2Q9H4K7 406 aa5.44□□□□□ -1.54
SBDSP1-204ENST00000453858 GPN2Q9H9Y4 310 aaPredicted RBP5.44□□□□□ -1.54
SBDSP1-204ENST00000453858 KCNMB3Q9NPA1 279 aa5.44□□□□□ -1.54
SBDSP1-204ENST00000453858 CYTH4Q9UIA0 394 aa5.44□□□□□ -1.54
SBDSP1-204ENST00000453858 TMEM59LQ9UK28 342 aa5.44□□□□□ -1.54
SBDSP1-204ENST00000453858 UBQLN1Q9UMX0 589 aaKnown RBP5.44□□□□□ -1.54
SBDSP1-204ENST00000453858 DMTF1Q9Y222 760 aa5.44□□□□□ -1.54
SBDSP1-204ENST00000453858 SH3BP1Q9Y3L3 701 aa5.44□□□□□ -1.54
SBDSP1-204ENST00000453858 PCDHGA9Q9Y5G4 932 aaKnown RBP5.44□□□□□ -1.54
SBDSP1-204ENST00000453858 B3GALT1Q9Y5Z6 326 aa5.44□□□□□ -1.54
SBDSP1-204ENST00000453858 CACNA1CQ13936 2221 aa5.43□□□□□ -1.54
SBDSP1-204ENST00000453858 FER1L5A0AVI2 2057 aa5.43□□□□□ -1.54
SBDSP1-204ENST00000453858 LACTBL1A8MY62 500 aa5.43□□□□□ -1.54
SBDSP1-204ENST00000453858 SLC37A4O43826 429 aa5.43□□□□□ -1.54
SBDSP1-204ENST00000453858 GCATO75600 419 aa5.43□□□□□ -1.54
SBDSP1-204ENST00000453858 RNASEH2AO75792 299 aaKnown RBP5.43□□□□□ -1.54
SBDSP1-204ENST00000453858 LY6G6DO95868 133 aa5.43□□□□□ -1.54
SBDSP1-204ENST00000453858 GSTM1P09488 218 aa5.43□□□□□ -1.54
SBDSP1-204ENST00000453858 ZDHHC11BP0C7U3 371 aa5.43□□□□□ -1.54
SBDSP1-204ENST00000453858 CXCL8P10145 99 aa5.43□□□□□ -1.54
SBDSP1-204ENST00000453858 XRCC6P12956 609 aaKnown RBP eCLIP5.43□□□□□ -1.54
SBDSP1-204ENST00000453858 RAC2P15153 192 aa5.43□□□□□ -1.54
SBDSP1-204ENST00000453858 GOT1P17174 413 aa5.43□□□□□ -1.54
SBDSP1-204ENST00000453858 TCN2P20062 427 aa5.43□□□□□ -1.54
SBDSP1-204ENST00000453858 SDSP20132 328 aa5.43□□□□□ -1.54
SBDSP1-204ENST00000453858 NFKBIAP25963 317 aa5.43□□□□□ -1.54
SBDSP1-204ENST00000453858 PCSK6P29122 969 aa5.43□□□□□ -1.54
SBDSP1-204ENST00000453858 NUDT1P36639 197 aa5.43□□□□□ -1.54
SBDSP1-204ENST00000453858 PGFP49763 221 aa5.43□□□□□ -1.54
SBDSP1-204ENST00000453858 GP2P55259 537 aaKnown RBP5.43□□□□□ -1.54
SBDSP1-204ENST00000453858 HNRNPKP61978 463 aaKnown RBP eCLIP5.43□□□□□ -1.54
SBDSP1-204ENST00000453858 FOXM1Q08050 763 aa5.43□□□□□ -1.54
SBDSP1-204ENST00000453858 SEMA5AQ13591 1074 aa5.43□□□□□ -1.54
SBDSP1-204ENST00000453858 FZD2Q14332 565 aa5.43□□□□□ -1.54
SBDSP1-204ENST00000453858 E2F5Q15329 346 aa5.43□□□□□ -1.54
SBDSP1-204ENST00000453858 DEFB133Q30KQ1 61 aa5.43□□□□□ -1.54
SBDSP1-204ENST00000453858 ZNF568Q3ZCX4 644 aa5.43□□□□□ -1.54
SBDSP1-204ENST00000453858 APBB1IPQ7Z5R6 666 aaPredicted RBP5.43□□□□□ -1.54
SBDSP1-204ENST00000453858 KIAA0907Q7Z7F0 614 aaPredicted RBP5.43□□□□□ -1.54
SBDSP1-204ENST00000453858 PRPF39Q86UA1 669 aaKnown RBP5.43□□□□□ -1.54
SBDSP1-204ENST00000453858 ADIPOR2Q86V24 386 aa5.43□□□□□ -1.54
SBDSP1-204ENST00000453858 RAB11FIP4Q86YS3 637 aa5.43□□□□□ -1.54
SBDSP1-204ENST00000453858 SCN4BQ8IWT1 228 aa5.43□□□□□ -1.54
SBDSP1-204ENST00000453858 TPH2Q8IWU9 490 aa5.43□□□□□ -1.54
SBDSP1-204ENST00000453858 PDZD8Q8NEN9 1154 aa5.43□□□□□ -1.54
SBDSP1-204ENST00000453858 NRGNQ92686 78 aa5.43□□□□□ -1.54
SBDSP1-204ENST00000453858 C18orf12Q96KH6 178 aa5.43□□□□□ -1.54
SBDSP1-204ENST00000453858 TMEM121Q9BTD3 319 aa5.43□□□□□ -1.54
SBDSP1-204ENST00000453858 CDADC1Q9BWV3 514 aa5.43□□□□□ -1.54
SBDSP1-204ENST00000453858 HAPLN2Q9GZV7 340 aa5.43□□□□□ -1.54
SBDSP1-204ENST00000453858 LRRN3Q9H3W5 708 aa5.43□□□□□ -1.54
SBDSP1-204ENST00000453858 PIF1Q9H611 641 aa5.43□□□□□ -1.54
SBDSP1-204ENST00000453858 SLAMF7Q9NQ25 335 aa5.43□□□□□ -1.54
SBDSP1-204ENST00000453858 MRPL40Q9NQ50 206 aaKnown RBP5.43□□□□□ -1.54
SBDSP1-204ENST00000453858 TMEM30AQ9NV96 361 aa5.43□□□□□ -1.54
SBDSP1-204ENST00000453858 PADI4Q9UM07 663 aa5.43□□□□□ -1.54
SBDSP1-204ENST00000453858 OSGIN2Q9Y236 505 aa5.43□□□□□ -1.54
SBDSP1-204ENST00000453858 NTNG1Q9Y2I2 539 aa5.43□□□□□ -1.54
SBDSP1-204ENST00000453858 TMA7Q9Y2S6 64 aaKnown RBP5.43□□□□□ -1.54
SBDSP1-204ENST00000453858 MRPS18BQ9Y676 258 aaKnown RBP5.43□□□□□ -1.54
SBDSP1-204ENST00000453858 OAS3Q9Y6K5 1087 aaKnown RBP5.43□□□□□ -1.54
SBDSP1-204ENST00000453858 HYDINQ4G0P3 5121 aa5.42□□□□□ -1.54
SBDSP1-204ENST00000453858 TLDC2A0PJX2 215 aa5.42□□□□□ -1.54
SBDSP1-204ENST00000453858 TMEM82A0PJX8 343 aa5.42□□□□□ -1.54
SBDSP1-204ENST00000453858 FITM1A5D6W6 292 aa5.42□□□□□ -1.54
SBDSP1-204ENST00000453858 E7EWF7 191 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms