RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 RNF103O00237 685 aa16.07■□□□□ 0.16
SNX17-204ENST00000453453 GFRA2O00451 464 aa16.07■□□□□ 0.16
SNX17-204ENST00000453453 OPHN1O60890 802 aa16.07■□□□□ 0.16
SNX17-204ENST00000453453 GCATO75600 419 aa16.07■□□□□ 0.16
SNX17-204ENST00000453453 ETS1P14921 441 aa16.07■□□□□ 0.16
SNX17-204ENST00000453453 OXCT1P55809 520 aa16.07■□□□□ 0.16
SNX17-204ENST00000453453 SLC34A1Q06495 639 aa16.07■□□□□ 0.16
SNX17-204ENST00000453453 DLX2Q07687 328 aaPredicted RBP16.07■□□□□ 0.16
SNX17-204ENST00000453453 CCDC6Q16204 474 aa16.07■□□□□ 0.16
SNX17-204ENST00000453453 KLHL38Q2WGJ6 581 aa16.07■□□□□ 0.16
SNX17-204ENST00000453453 TAF1BQ53T94 588 aaPredicted RBP16.07■□□□□ 0.16
SNX17-204ENST00000453453 CENPUQ71F23 418 aa16.07■□□□□ 0.16
SNX17-204ENST00000453453 ZNF557Q8N988 423 aaPredicted RBP16.07■□□□□ 0.16
SNX17-204ENST00000453453 BPIFB1Q8TDL5 484 aa16.07■□□□□ 0.16
SNX17-204ENST00000453453 LRRN4Q8WUT4 740 aa16.07■□□□□ 0.16
SNX17-204ENST00000453453 PTCD3Q96EY7 689 aaKnown RBP16.07■□□□□ 0.16
SNX17-204ENST00000453453 MSLNLQ96KJ4 702 aa16.07■□□□□ 0.16
SNX17-204ENST00000453453 MUC3BQ9H195 1237 aa16.07■□□□□ 0.16
SNX17-204ENST00000453453 NOL6Q9H6R4 1146 aaKnown RBP16.07■□□□□ 0.16
SNX17-204ENST00000453453 THG1LQ9NWX6 298 aaKnown RBP16.07■□□□□ 0.16
SNX17-204ENST00000453453 STX18Q9P2W9 335 aaKnown RBP16.07■□□□□ 0.16
SNX17-204ENST00000453453 IPO11Q9UI26 975 aaKnown RBP16.07■□□□□ 0.16
SNX17-204ENST00000453453 CD207Q9UJ71 328 aa16.07■□□□□ 0.16
SNX17-204ENST00000453453 TBC1D30Q9Y2I9 924 aa16.07■□□□□ 0.16
SNX17-204ENST00000453453 CHD5Q8TDI0 1954 aa16.06■□□□□ 0.16
SNX17-204ENST00000453453 A0A0A0MRY4 1105 aa16.06■□□□□ 0.16
SNX17-204ENST00000453453 F8W8V4 182 aa16.06■□□□□ 0.16
SNX17-204ENST00000453453 ZSCAN5DPP0CG00 497 aa16.06■□□□□ 0.16
SNX17-204ENST00000453453 RPL22P35268 128 aaKnown RBP16.06■□□□□ 0.16
SNX17-204ENST00000453453 LTBRP36941 435 aa16.06■□□□□ 0.16
SNX17-204ENST00000453453 CDK18Q07002 472 aa16.06■□□□□ 0.16
SNX17-204ENST00000453453 OR52E8Q6IFG1 317 aa16.06■□□□□ 0.16
SNX17-204ENST00000453453 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.06■□□□□ 0.16
SNX17-204ENST00000453453 GLIS1Q8NBF1 620 aa16.06■□□□□ 0.16
SNX17-204ENST00000453453 DEPDC1BQ8WUY9 529 aa16.06■□□□□ 0.16
SNX17-204ENST00000453453 NSL1Q96IY1 281 aa16.06■□□□□ 0.16
SNX17-204ENST00000453453 SPATA13Q96N96 652 aa16.06■□□□□ 0.16
SNX17-204ENST00000453453 DHRS4Q9BTZ2 278 aa16.06■□□□□ 0.16
SNX17-204ENST00000453453 TRIM55Q9BYV6 548 aa16.06■□□□□ 0.16
SNX17-204ENST00000453453 ZFP14Q9HCL3 533 aa16.06■□□□□ 0.16
SNX17-204ENST00000453453 DUS2Q9NX74 493 aaKnown RBP16.06■□□□□ 0.16
SNX17-204ENST00000453453 KLHL8Q9P2G9 620 aaPredicted RBP16.06■□□□□ 0.16
SNX17-204ENST00000453453 TRHDEQ9UKU6 1024 aa16.06■□□□□ 0.16
SNX17-204ENST00000453453 ANGPTL2Q9UKU9 493 aa16.06■□□□□ 0.16
SNX17-204ENST00000453453 PDLIM1O00151 329 aa16.05■□□□□ 0.16
SNX17-204ENST00000453453 KCNK1O00180 336 aa16.05■□□□□ 0.16
SNX17-204ENST00000453453 MATN3O15232 486 aa16.05■□□□□ 0.16
SNX17-204ENST00000453453 MAFKO60675 156 aa16.05■□□□□ 0.16
SNX17-204ENST00000453453 SPAG7O75391 227 aa16.05■□□□□ 0.16
SNX17-204ENST00000453453 VIPR2P41587 438 aa16.05■□□□□ 0.16
SNX17-204ENST00000453453 GEMIN4P57678 1058 aaKnown RBP16.05■□□□□ 0.16
SNX17-204ENST00000453453 BIRC2Q13490 618 aa16.05■□□□□ 0.16
SNX17-204ENST00000453453 SERINC3Q13530 473 aa16.05■□□□□ 0.16
SNX17-204ENST00000453453 SLC1A5Q15758 541 aa16.05■□□□□ 0.16
SNX17-204ENST00000453453 RNF219Q5W0B1 726 aaPredicted RBP16.05■□□□□ 0.16
SNX17-204ENST00000453453 IL31Q6EBC2 164 aa16.05■□□□□ 0.16
SNX17-204ENST00000453453 ITPRIPL1Q6GPH6 555 aa16.05■□□□□ 0.16
SNX17-204ENST00000453453 ZNF449Q6P9G9 518 aa16.05■□□□□ 0.16
SNX17-204ENST00000453453 POTEHQ6S545 545 aa16.05■□□□□ 0.16
SNX17-204ENST00000453453 PRUNE1Q86TP1 453 aa16.05■□□□□ 0.16
SNX17-204ENST00000453453 SMRP1Q8NCR6 262 aa16.05■□□□□ 0.16
SNX17-204ENST00000453453 RIN3Q8TB24 985 aa16.05■□□□□ 0.16
SNX17-204ENST00000453453 OSCP1Q8WVF1 389 aa16.05■□□□□ 0.16
SNX17-204ENST00000453453 IRF7Q92985 503 aa16.05■□□□□ 0.16
SNX17-204ENST00000453453 BHMTQ93088 406 aa16.05■□□□□ 0.16
SNX17-204ENST00000453453 FATE1Q969F0 183 aa16.05■□□□□ 0.16
SNX17-204ENST00000453453 SPHK2Q9NRA0 654 aa16.05■□□□□ 0.16
SNX17-204ENST00000453453 DNAJC17Q9NVM6 304 aaKnown RBP16.05■□□□□ 0.16
SNX17-204ENST00000453453 WNT6Q9Y6F9 365 aa16.05■□□□□ 0.16
SNX17-204ENST00000453453 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.05■□□□□ 0.16
SNX17-204ENST00000453453 HEPACAM2A8MVW5 462 aa16.05■□□□□ 0.16
SNX17-204ENST00000453453 PSMG1O95456 288 aa16.05■□□□□ 0.16
SNX17-204ENST00000453453 PTPN3P26045 913 aa16.05■□□□□ 0.16
SNX17-204ENST00000453453 HOXD9P28356 352 aaPredicted RBP16.05■□□□□ 0.16
SNX17-204ENST00000453453 RPA3P35244 121 aaPredicted RBP16.05■□□□□ 0.16
SNX17-204ENST00000453453 RAP1GDS1P52306 607 aa16.05■□□□□ 0.16
SNX17-204ENST00000453453 BASP1P80723 227 aaKnown RBP16.05■□□□□ 0.16
SNX17-204ENST00000453453 IL10RBQ08334 325 aa16.05■□□□□ 0.16
SNX17-204ENST00000453453 GPR153Q6NV75 609 aa16.05■□□□□ 0.16
SNX17-204ENST00000453453 LVRNQ6Q4G3 990 aa16.05■□□□□ 0.16
SNX17-204ENST00000453453 LRRC74BQ6ZQY2 392 aa16.05■□□□□ 0.16
SNX17-204ENST00000453453 ARHGAP36Q6ZRI8 547 aa16.05■□□□□ 0.16
SNX17-204ENST00000453453 YAF2Q8IY57 180 aa16.05■□□□□ 0.16
SNX17-204ENST00000453453 ATP11CQ8NB49 1132 aa16.05■□□□□ 0.16
SNX17-204ENST00000453453 TTC8Q8TAM2 541 aa16.05■□□□□ 0.16
SNX17-204ENST00000453453 CCDC110Q8TBZ0 833 aa16.05■□□□□ 0.16
SNX17-204ENST00000453453 SPON2Q9BUD6 331 aa16.05■□□□□ 0.16
SNX17-204ENST00000453453 BBS2Q9BXC9 721 aa16.05■□□□□ 0.16
SNX17-204ENST00000453453 CADM1Q9BY67 442 aaKnown RBP16.05■□□□□ 0.16
SNX17-204ENST00000453453 ATP13A1Q9HD20 1204 aa16.05■□□□□ 0.16
SNX17-204ENST00000453453 SLCO1B3Q9NPD5 702 aa16.05■□□□□ 0.16
SNX17-204ENST00000453453 IL1RAPL1Q9NZN1 696 aa16.05■□□□□ 0.16
SNX17-204ENST00000453453 DOCK8Q8NF50 2099 aa16.04■□□□□ 0.16
SNX17-204ENST00000453453 FOXO6A8MYZ6 492 aa16.04■□□□□ 0.16
SNX17-204ENST00000453453 NEDD8-MDP1E9PL57 170 aa16.04■□□□□ 0.16
SNX17-204ENST00000453453 GSC2O15499 205 aa16.04■□□□□ 0.16
SNX17-204ENST00000453453 MAGEC1O60732 1142 aa16.04■□□□□ 0.16
SNX17-204ENST00000453453 FAM155BO75949 473 aa16.04■□□□□ 0.16
SNX17-204ENST00000453453 CBX6O95503 412 aa16.04■□□□□ 0.16
SNX17-204ENST00000453453 NFATC1O95644 943 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms