RNA–Protein interactions for RNA: ENST00000453441.1

COL28A1-205, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 2

Gene COL28A1, Length 700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-205ENST00000453441 SLC45A4Q5BKX6 768 aa8.83□□□□□ -1
COL28A1-205ENST00000453441 SPDYCQ5MJ68 293 aa8.83□□□□□ -1
COL28A1-205ENST00000453441 DCAF12L1Q5VU92 463 aa8.83□□□□□ -1
COL28A1-205ENST00000453441 KIAA1324Q6UXG2 1013 aaKnown RBP8.83□□□□□ -1
COL28A1-205ENST00000453441 ZSCAN30Q86W11 494 aa8.83□□□□□ -1
COL28A1-205ENST00000453441 SLC13A5Q86YT5 568 aaPredicted RBP8.83□□□□□ -1
COL28A1-205ENST00000453441 PGBD3Q8N328 593 aa8.83□□□□□ -1
COL28A1-205ENST00000453441 SLC35F6Q8N357 371 aa8.83□□□□□ -1
COL28A1-205ENST00000453441 ZBTB44Q8NCP5 570 aa8.83□□□□□ -1
COL28A1-205ENST00000453441 CCNYQ8ND76 341 aa8.83□□□□□ -1
COL28A1-205ENST00000453441 MDGA1Q8NFP4 955 aa8.83□□□□□ -1
COL28A1-205ENST00000453441 HMGB4Q8WW32 186 aa8.83□□□□□ -1
COL28A1-205ENST00000453441 ZNF641Q96N77 438 aaPredicted RBP8.83□□□□□ -1
COL28A1-205ENST00000453441 PPP1R2P1Q96PQ5 205 aa8.83□□□□□ -1
COL28A1-205ENST00000453441 QKIQ96PU8 341 aaKnown RBP eCLIP8.83□□□□□ -1
COL28A1-205ENST00000453441 IL12RB2Q99665 862 aa8.83□□□□□ -1
COL28A1-205ENST00000453441 MGME1Q9BQP7 344 aa8.83□□□□□ -1
COL28A1-205ENST00000453441 HEMGNQ9BXL5 484 aa8.83□□□□□ -1
COL28A1-205ENST00000453441 MKRN2Q9H000 416 aaKnown RBP8.83□□□□□ -1
COL28A1-205ENST00000453441 PABPC3Q9H361 631 aaKnown RBP8.83□□□□□ -1
COL28A1-205ENST00000453441 ZDHHC4Q9NPG8 344 aa8.83□□□□□ -1
COL28A1-205ENST00000453441 ITM2CQ9NQX7 267 aa8.83□□□□□ -1
COL28A1-205ENST00000453441 DYRK4Q9NR20 520 aa8.83□□□□□ -1
COL28A1-205ENST00000453441 USP36Q9P275 1121 aaKnown RBP8.83□□□□□ -1
COL28A1-205ENST00000453441 HECAQ9UBI9 543 aaPredicted RBP8.83□□□□□ -1
COL28A1-205ENST00000453441 IL36AQ9UHA7 158 aa8.83□□□□□ -1
COL28A1-205ENST00000453441 PPM1HQ9ULR3 514 aa8.83□□□□□ -1
COL28A1-205ENST00000453441 TTC7AQ9ULT0 858 aaPredicted RBP8.83□□□□□ -1
COL28A1-205ENST00000453441 CTAGE9A4FU28 777 aa8.82□□□□□ -1
COL28A1-205ENST00000453441 K7ERQ8 282 aa8.82□□□□□ -1
COL28A1-205ENST00000453441 KIF2AO00139 706 aaPredicted RBP8.82□□□□□ -1
COL28A1-205ENST00000453441 LILRB5O75023 590 aa8.82□□□□□ -1
COL28A1-205ENST00000453441 SOCS5O75159 536 aa8.82□□□□□ -1
COL28A1-205ENST00000453441 ZNF821O75541 412 aaPredicted RBP8.82□□□□□ -1
COL28A1-205ENST00000453441 PECAM1P16284 738 aaPredicted RBP8.82□□□□□ -1
COL28A1-205ENST00000453441 ITGB7P26010 798 aa8.82□□□□□ -1
COL28A1-205ENST00000453441 SERPINA4P29622 427 aa8.82□□□□□ -1
COL28A1-205ENST00000453441 P2RY2P41231 377 aa8.82□□□□□ -1
COL28A1-205ENST00000453441 DPP6P42658 865 aa8.82□□□□□ -1
COL28A1-205ENST00000453441 DNA2P51530 1060 aa8.82□□□□□ -1
COL28A1-205ENST00000453441 SLC10A7Q0GE19 358 aa8.82□□□□□ -1
COL28A1-205ENST00000453441 AP1B1Q10567 949 aa8.82□□□□□ -1
COL28A1-205ENST00000453441 SLC10A2Q12908 348 aaPredicted RBP8.82□□□□□ -1
COL28A1-205ENST00000453441 CYTH1Q15438 398 aa8.82□□□□□ -1
COL28A1-205ENST00000453441 OXLD1Q5BKU9 147 aa8.82□□□□□ -1
COL28A1-205ENST00000453441 LCE2CQ5TA81 110 aa8.82□□□□□ -1
COL28A1-205ENST00000453441 HEATR6Q6AI08 1181 aaKnown RBP8.82□□□□□ -1
COL28A1-205ENST00000453441 ALG1LQ6GMV1 187 aa8.82□□□□□ -1
COL28A1-205ENST00000453441 DRICH1Q6PGQ1 229 aaPredicted RBP8.82□□□□□ -1
COL28A1-205ENST00000453441 DPY19L3Q6ZPD9 716 aa8.82□□□□□ -1
COL28A1-205ENST00000453441 ARHGAP36Q6ZRI8 547 aa8.82□□□□□ -1
COL28A1-205ENST00000453441 SRLQ86TD4 932 aa8.82□□□□□ -1
COL28A1-205ENST00000453441 STK40Q8N2I9 435 aa8.82□□□□□ -1
COL28A1-205ENST00000453441 RYBPQ8N488 228 aaPredicted RBP8.82□□□□□ -1
COL28A1-205ENST00000453441 ZNF366Q8N895 744 aa8.82□□□□□ -1
COL28A1-205ENST00000453441 PIP4K2CQ8TBX8 421 aa8.82□□□□□ -1
COL28A1-205ENST00000453441 ACTL9Q8TC94 416 aa8.82□□□□□ -1
COL28A1-205ENST00000453441 GAB3Q8WWW8 586 aa8.82□□□□□ -1
COL28A1-205ENST00000453441 RAB7BQ96AH8 199 aa8.82□□□□□ -1
COL28A1-205ENST00000453441 FAM131CQ96AQ9 280 aa8.82□□□□□ -1
COL28A1-205ENST00000453441 NUDCD1Q96RS6 583 aa8.82□□□□□ -1
COL28A1-205ENST00000453441 FAM129BQ96TA1 746 aa8.82□□□□□ -1
COL28A1-205ENST00000453441 NAPGQ99747 312 aaPredicted RBP8.82□□□□□ -1
COL28A1-205ENST00000453441 OMDQ99983 421 aa8.82□□□□□ -1
COL28A1-205ENST00000453441 HDAC8Q9BY41 377 aa8.82□□□□□ -1
COL28A1-205ENST00000453441 TM6SF2Q9BZW4 377 aa8.82□□□□□ -1
COL28A1-205ENST00000453441 GRIP2Q9C0E4 1043 aa8.82□□□□□ -1
COL28A1-205ENST00000453441 TNKS2Q9H2K2 1166 aa8.82□□□□□ -1
COL28A1-205ENST00000453441 ATP13A3Q9H7F0 1226 aa8.82□□□□□ -1
COL28A1-205ENST00000453441 SGK2Q9HBY8 427 aa8.82□□□□□ -1
COL28A1-205ENST00000453441 C2orf42Q9NWW7 574 aa8.82□□□□□ -1
COL28A1-205ENST00000453441 DKK3Q9UBP4 350 aa8.82□□□□□ -1
COL28A1-205ENST00000453441 LHX3Q9UBR4 397 aa8.82□□□□□ -1
COL28A1-205ENST00000453441 RNF14Q9UBS8 474 aa8.82□□□□□ -1
COL28A1-205ENST00000453441 TRHDEQ9UKU6 1024 aa8.82□□□□□ -1
COL28A1-205ENST00000453441 SNX12Q9UMY4 172 aa8.82□□□□□ -1
COL28A1-205ENST00000453441 SPAG17Q6Q759 2223 aa8.82□□□□□ -1
COL28A1-205ENST00000453441 BCLAF3A2AJT9 711 aaKnown RBP8.81□□□□□ -1
COL28A1-205ENST00000453441 ANTXRLA6NF34 631 aa8.81□□□□□ -1
COL28A1-205ENST00000453441 USP27XA6NNY8 438 aa8.81□□□□□ -1
COL28A1-205ENST00000453441 H7C0C1 242 aa8.81□□□□□ -1
COL28A1-205ENST00000453441 KRIT1O00522 736 aa8.81□□□□□ -1
COL28A1-205ENST00000453441 INSIG1O15503 277 aa8.81□□□□□ -1
COL28A1-205ENST00000453441 CEP104O60308 925 aa8.81□□□□□ -1
COL28A1-205ENST00000453441 RPP40O75818 363 aaKnown RBP8.81□□□□□ -1
COL28A1-205ENST00000453441 IL1BP01584 269 aa8.81□□□□□ -1
COL28A1-205ENST00000453441 RBP3P10745 1247 aa8.81□□□□□ -1
COL28A1-205ENST00000453441 VAV1P15498 845 aa8.81□□□□□ -1
COL28A1-205ENST00000453441 CR2P20023 1033 aa8.81□□□□□ -1
COL28A1-205ENST00000453441 CD6P30203 668 aa8.81□□□□□ -1
COL28A1-205ENST00000453441 SLC8A1P32418 973 aa8.81□□□□□ -1
COL28A1-205ENST00000453441 NUDT1P36639 197 aa8.81□□□□□ -1
COL28A1-205ENST00000453441 ATP5OP48047 213 aa8.81□□□□□ -1
COL28A1-205ENST00000453441 PSMD8P48556 350 aa8.81□□□□□ -1
COL28A1-205ENST00000453441 FNTBP49356 437 aa8.81□□□□□ -1
COL28A1-205ENST00000453441 EIF3EP60228 445 aaKnown RBP8.81□□□□□ -1
COL28A1-205ENST00000453441 ETF1P62495 437 aaKnown RBP8.81□□□□□ -1
COL28A1-205ENST00000453441 POLR2LP62875 67 aaKnown RBP8.81□□□□□ -1
COL28A1-205ENST00000453441 OTUD4Q01804 1114 aaKnown RBP8.81□□□□□ -1
COL28A1-205ENST00000453441 ADCY2Q08462 1091 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms