RNA–Protein interactions for RNA: ENST00000453358.5

PTPA-224, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 4

Gene PTPA, Length 548 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-224ENST00000453358 SIX2Q9NPC8 291 aa13.11□□□□□ -0.31
PTPA-224ENST00000453358 MBNL1Q9NR56 388 aaKnown RBP13.11□□□□□ -0.31
PTPA-224ENST00000453358 WDR70Q9NW82 654 aa13.11□□□□□ -0.31
PTPA-224ENST00000453358 PPARGC1AQ9UBK2 798 aaKnown RBP13.11□□□□□ -0.31
PTPA-224ENST00000453358 GULP1Q9UBP9 304 aa13.11□□□□□ -0.31
PTPA-224ENST00000453358 RELNP78509 3460 aa13.11□□□□□ -0.31
PTPA-224ENST00000453358 LRRK2Q5S007 2527 aa13.1□□□□□ -0.31
PTPA-224ENST00000453358 FOXN3O00409 490 aaPredicted RBP13.1□□□□□ -0.31
PTPA-224ENST00000453358 KRIT1O00522 736 aa13.1□□□□□ -0.31
PTPA-224ENST00000453358 TOR1BO14657 336 aa13.1□□□□□ -0.31
PTPA-224ENST00000453358 MMP20O60882 483 aa13.1□□□□□ -0.31
PTPA-224ENST00000453358 FGFR1OPO95684 399 aaKnown RBP13.1□□□□□ -0.31
PTPA-224ENST00000453358 GSRP00390 522 aa13.1□□□□□ -0.31
PTPA-224ENST00000453358 ITGB2P05107 769 aa13.1□□□□□ -0.31
PTPA-224ENST00000453358 PNMA6AP0CW24 399 aaPredicted RBP13.1□□□□□ -0.31
PTPA-224ENST00000453358 HGFP14210 728 aa13.1□□□□□ -0.31
PTPA-224ENST00000453358 ITGB6P18564 788 aa13.1□□□□□ -0.31
PTPA-224ENST00000453358 PON1P27169 355 aa13.1□□□□□ -0.31
PTPA-224ENST00000453358 CDH5P33151 784 aaPredicted RBP13.1□□□□□ -0.31
PTPA-224ENST00000453358 CCL7P80098 99 aa13.1□□□□□ -0.31
PTPA-224ENST00000453358 PPARDQ03181 441 aa13.1□□□□□ -0.31
PTPA-224ENST00000453358 MYLK3Q32MK0 819 aa13.1□□□□□ -0.31
PTPA-224ENST00000453358 LRRC73Q5JTD7 316 aa13.1□□□□□ -0.31
PTPA-224ENST00000453358 LVRNQ6Q4G3 990 aa13.1□□□□□ -0.31
PTPA-224ENST00000453358 FAM131BQ86XD5 332 aa13.1□□□□□ -0.31
PTPA-224ENST00000453358 SDR16C5Q8N3Y7 309 aa13.1□□□□□ -0.31
PTPA-224ENST00000453358 FSTL5Q8N475 847 aaPredicted RBP13.1□□□□□ -0.31
PTPA-224ENST00000453358 TP53I13Q8NBR0 393 aaPredicted RBP13.1□□□□□ -0.31
PTPA-224ENST00000453358 OR2AP1Q8NGE2 309 aa13.1□□□□□ -0.31
PTPA-224ENST00000453358 PCDH19Q8TAB3 1148 aa13.1□□□□□ -0.31
PTPA-224ENST00000453358 EXTL1Q92935 676 aa13.1□□□□□ -0.31
PTPA-224ENST00000453358 KLHL32Q96NJ5 620 aa13.1□□□□□ -0.31
PTPA-224ENST00000453358 GFM1Q96RP9 751 aaKnown RBP13.1□□□□□ -0.31
PTPA-224ENST00000453358 OSBPL1AQ9BXW6 950 aa13.1□□□□□ -0.31
PTPA-224ENST00000453358 STRADBQ9C0K7 418 aa13.1□□□□□ -0.31
PTPA-224ENST00000453358 NDFIP2Q9NV92 336 aa13.1□□□□□ -0.31
PTPA-224ENST00000453358 SIRPGQ9P1W8 387 aa13.1□□□□□ -0.31
PTPA-224ENST00000453358 A0A1W2PQM1 296 aa13.09□□□□□ -0.31
PTPA-224ENST00000453358 FAM170AA1A519 330 aa13.09□□□□□ -0.31
PTPA-224ENST00000453358 GTPBP10A4D1E9 387 aaKnown RBP13.09□□□□□ -0.31
PTPA-224ENST00000453358 TMX2-CTNND1H3BSU7 103 aa13.09□□□□□ -0.31
PTPA-224ENST00000453358 TM7SF2O76062 418 aa13.09□□□□□ -0.31
PTPA-224ENST00000453358 POP4O95707 220 aaKnown RBP13.09□□□□□ -0.31
PTPA-224ENST00000453358 RPLP0P05388 317 aaKnown RBP13.09□□□□□ -0.31
PTPA-224ENST00000453358 ITIH2P19823 946 aa13.09□□□□□ -0.31
PTPA-224ENST00000453358 CCKBRP32239 447 aa13.09□□□□□ -0.31
PTPA-224ENST00000453358 ETFBP38117 255 aa13.09□□□□□ -0.31
PTPA-224ENST00000453358 BLKP51451 505 aa13.09□□□□□ -0.31
PTPA-224ENST00000453358 HK3P52790 923 aa13.09□□□□□ -0.31
PTPA-224ENST00000453358 INHBCP55103 352 aa13.09□□□□□ -0.31
PTPA-224ENST00000453358 GEMIN4P57678 1058 aaKnown RBP13.09□□□□□ -0.31
PTPA-224ENST00000453358 SNRPD1P62314 119 aaKnown RBP13.09□□□□□ -0.31
PTPA-224ENST00000453358 NFKB2Q00653 900 aa13.09□□□□□ -0.31
PTPA-224ENST00000453358 POLD3Q15054 466 aaPredicted RBP13.09□□□□□ -0.31
PTPA-224ENST00000453358 IRF4Q15306 451 aa13.09□□□□□ -0.31
PTPA-224ENST00000453358 ELOCQ15369 112 aa13.09□□□□□ -0.31
PTPA-224ENST00000453358 ALG11Q2TAA5 492 aa13.09□□□□□ -0.31
PTPA-224ENST00000453358 ATXN7L2Q5T6C5 722 aaPredicted RBP13.09□□□□□ -0.31
PTPA-224ENST00000453358 MANEALQ5VSG8 457 aa13.09□□□□□ -0.31
PTPA-224ENST00000453358 TTC7BQ86TV6 843 aa13.09□□□□□ -0.31
PTPA-224ENST00000453358 NLRP14Q86W24 1093 aa13.09□□□□□ -0.31
PTPA-224ENST00000453358 HID1Q8IV36 788 aa13.09□□□□□ -0.31
PTPA-224ENST00000453358 FAM71AQ8IYT1 594 aa13.09□□□□□ -0.31
PTPA-224ENST00000453358 TMEM35BQ8NCS4 154 aa13.09□□□□□ -0.31
PTPA-224ENST00000453358 CXorf40AQ8TE69 158 aa13.09□□□□□ -0.31
PTPA-224ENST00000453358 SCG3Q8WXD2 468 aaKnown RBP13.09□□□□□ -0.31
PTPA-224ENST00000453358 TSACCQ96A04 125 aaPredicted RBP13.09□□□□□ -0.31
PTPA-224ENST00000453358 C18orf8Q96DM3 657 aa13.09□□□□□ -0.31
PTPA-224ENST00000453358 CFAP57Q96MR6 1250 aa13.09□□□□□ -0.31
PTPA-224ENST00000453358 EPAS1Q99814 870 aa13.09□□□□□ -0.31
PTPA-224ENST00000453358 C1QTNF7Q9BXJ2 289 aa13.09□□□□□ -0.31
PTPA-224ENST00000453358 CPEB1Q9BZB8 566 aaKnown RBP13.09□□□□□ -0.31
PTPA-224ENST00000453358 EDEM3Q9BZQ6 932 aa13.09□□□□□ -0.31
PTPA-224ENST00000453358 TMEM59LQ9UK28 342 aa13.09□□□□□ -0.31
PTPA-224ENST00000453358 DNAJC12Q9UKB3 198 aa13.09□□□□□ -0.31
PTPA-224ENST00000453358 DOLKQ9UPQ8 538 aa13.09□□□□□ -0.31
PTPA-224ENST00000453358 CHD5Q8TDI0 1954 aa13.09□□□□□ -0.31
PTPA-224ENST00000453358 NVLO15381 856 aaKnown RBP13.08□□□□□ -0.32
PTPA-224ENST00000453358 ALPIP09923 528 aa13.08□□□□□ -0.32
PTPA-224ENST00000453358 FAM87AP0C7U9 286 aa13.08□□□□□ -0.32
PTPA-224ENST00000453358 LIPCP11150 499 aa13.08□□□□□ -0.32
PTPA-224ENST00000453358 TIMP2P16035 220 aa13.08□□□□□ -0.32
PTPA-224ENST00000453358 MAPKAPK2P49137 400 aa13.08□□□□□ -0.32
PTPA-224ENST00000453358 PEX5P50542 639 aa13.08□□□□□ -0.32
PTPA-224ENST00000453358 NRG1Q02297 640 aaPredicted RBP13.08□□□□□ -0.32
PTPA-224ENST00000453358 SRSF1Q07955 248 aaKnown RBP eCLIP13.08□□□□□ -0.32
PTPA-224ENST00000453358 TCEA2Q15560 299 aa13.08□□□□□ -0.32
PTPA-224ENST00000453358 KLHL40Q2TBA0 621 aa13.08□□□□□ -0.32
PTPA-224ENST00000453358 C2CD6Q53TS8 623 aa13.08□□□□□ -0.32
PTPA-224ENST00000453358 GDPD4Q6W3E5 623 aa13.08□□□□□ -0.32
PTPA-224ENST00000453358 LEKR1Q6ZMV7 388 aa13.08□□□□□ -0.32
PTPA-224ENST00000453358 ATG14Q6ZNE5 492 aa13.08□□□□□ -0.32
PTPA-224ENST00000453358 IRF2BP1Q8IU81 584 aa13.08□□□□□ -0.32
PTPA-224ENST00000453358 CREBRFQ8IUR6 639 aa13.08□□□□□ -0.32
PTPA-224ENST00000453358 TMEM74Q96NL1 305 aa13.08□□□□□ -0.32
PTPA-224ENST00000453358 ARHGAP9Q9BRR9 750 aa13.08□□□□□ -0.32
PTPA-224ENST00000453358 WRAP53Q9BUR4 548 aaKnown RBP13.08□□□□□ -0.32
PTPA-224ENST00000453358 LRRN3Q9H3W5 708 aa13.08□□□□□ -0.32
PTPA-224ENST00000453358 PISDQ9UG56 409 aa13.08□□□□□ -0.32
PTPA-224ENST00000453358 GPR34Q9UPC5 381 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms