RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 MAD2L2Q9UI95 211 aa4.53□□□□□ -1.68
HMGB3P21-201ENST00000452483 FBXW2Q9UKT8 454 aa4.53□□□□□ -1.68
HMGB3P21-201ENST00000452483 DRG1Q9Y295 367 aaKnown RBP4.53□□□□□ -1.68
HMGB3P21-201ENST00000452483 SSX2IPQ9Y2D8 614 aa4.53□□□□□ -1.68
HMGB3P21-201ENST00000452483 NEU2Q9Y3R4 380 aa4.53□□□□□ -1.68
HMGB3P21-201ENST00000452483 KCTD3Q9Y597 815 aa4.53□□□□□ -1.68
HMGB3P21-201ENST00000452483 HCFC2Q9Y5Z7 792 aa4.53□□□□□ -1.68
HMGB3P21-201ENST00000452483 ACTL7AQ9Y615 435 aa4.53□□□□□ -1.68
HMGB3P21-201ENST00000452483 ZC3H12DA2A288 527 aaKnown RBP4.52□□□□□ -1.69
HMGB3P21-201ENST00000452483 OR2W5A6NFC9 320 aa4.52□□□□□ -1.69
HMGB3P21-201ENST00000452483 CDRT15L2A8MXV6 281 aa4.52□□□□□ -1.69
HMGB3P21-201ENST00000452483 TEX22C9J3V5 150 aa4.52□□□□□ -1.69
HMGB3P21-201ENST00000452483 ADAMDEC1O15204 470 aa4.52□□□□□ -1.69
HMGB3P21-201ENST00000452483 GRM6O15303 877 aa4.52□□□□□ -1.69
HMGB3P21-201ENST00000452483 ZNF254O75437 659 aa4.52□□□□□ -1.69
HMGB3P21-201ENST00000452483 DNAJB5O75953 348 aa4.52□□□□□ -1.69
HMGB3P21-201ENST00000452483 AKAP3O75969 853 aa4.52□□□□□ -1.69
HMGB3P21-201ENST00000452483 ALDH1A2O94788 518 aa4.52□□□□□ -1.69
HMGB3P21-201ENST00000452483 SEC24DO94855 1032 aaPredicted RBP4.52□□□□□ -1.69
HMGB3P21-201ENST00000452483 SIX3O95343 332 aaPredicted RBP4.52□□□□□ -1.69
HMGB3P21-201ENST00000452483 IL1AP01583 271 aa4.52□□□□□ -1.69
HMGB3P21-201ENST00000452483 ITGB1P05556 798 aa4.52□□□□□ -1.69
HMGB3P21-201ENST00000452483 C1SP09871 688 aa4.52□□□□□ -1.69
HMGB3P21-201ENST00000452483 LTA4HP09960 611 aaKnown RBP4.52□□□□□ -1.69
HMGB3P21-201ENST00000452483 ARP10275 920 aa4.52□□□□□ -1.69
HMGB3P21-201ENST00000452483 DLATP10515 647 aaKnown RBP4.52□□□□□ -1.69
HMGB3P21-201ENST00000452483 CD19P15391 556 aa4.52□□□□□ -1.69
HMGB3P21-201ENST00000452483 AGAP20933 346 aa4.52□□□□□ -1.69
HMGB3P21-201ENST00000452483 NR2F2P24468 414 aa4.52□□□□□ -1.69
HMGB3P21-201ENST00000452483 SFNP31947 248 aa4.52□□□□□ -1.69
HMGB3P21-201ENST00000452483 CCR1P32246 355 aa4.52□□□□□ -1.69
HMGB3P21-201ENST00000452483 TAGLN2P37802 199 aaKnown RBP4.52□□□□□ -1.69
HMGB3P21-201ENST00000452483 CCT6AP40227 531 aaKnown RBP4.52□□□□□ -1.69
HMGB3P21-201ENST00000452483 PNPLA4P41247 253 aa4.52□□□□□ -1.69
HMGB3P21-201ENST00000452483 PRRX1P54821 245 aa4.52□□□□□ -1.69
HMGB3P21-201ENST00000452483 HADHBP55084 474 aaKnown RBP4.52□□□□□ -1.69
HMGB3P21-201ENST00000452483 ADARP55265 1226 aaKnown RBP4.52□□□□□ -1.69
HMGB3P21-201ENST00000452483 ST8SIA6P61647 398 aa4.52□□□□□ -1.69
HMGB3P21-201ENST00000452483 MEF2AQ02078 507 aaPredicted RBP4.52□□□□□ -1.69
HMGB3P21-201ENST00000452483 CEBPZQ03701 1054 aaKnown RBP4.52□□□□□ -1.69
HMGB3P21-201ENST00000452483 GRIN1Q05586 938 aa4.52□□□□□ -1.69
HMGB3P21-201ENST00000452483 ARHGEF6Q15052 776 aa4.52□□□□□ -1.69
HMGB3P21-201ENST00000452483 NPY5RQ15761 445 aa4.52□□□□□ -1.69
HMGB3P21-201ENST00000452483 CYP2A13Q16696 494 aa4.52□□□□□ -1.69
HMGB3P21-201ENST00000452483 MST1LQ2TV78 715 aa4.52□□□□□ -1.69
HMGB3P21-201ENST00000452483 P3H1Q32P28 736 aa4.52□□□□□ -1.69
HMGB3P21-201ENST00000452483 DPCR1Q3MIW9 517 aa4.52□□□□□ -1.69
HMGB3P21-201ENST00000452483 ZSCAN23Q3MJ62 389 aa4.52□□□□□ -1.69
HMGB3P21-201ENST00000452483 PREPLQ4J6C6 727 aaPredicted RBP4.52□□□□□ -1.69
HMGB3P21-201ENST00000452483 ZNF385BQ569K4 471 aa4.52□□□□□ -1.69
HMGB3P21-201ENST00000452483 CACHD1Q5VU97 1274 aa4.52□□□□□ -1.69
HMGB3P21-201ENST00000452483 SFMBT2Q5VUG0 894 aa4.52□□□□□ -1.69
HMGB3P21-201ENST00000452483 PSRC1Q6PGN9 363 aaPredicted RBP4.52□□□□□ -1.69
HMGB3P21-201ENST00000452483 MOXD1Q6UVY6 613 aa4.52□□□□□ -1.69
HMGB3P21-201ENST00000452483 SERPINA13PQ6UXR4 307 aa4.52□□□□□ -1.69
HMGB3P21-201ENST00000452483 ABHD15Q6UXT9 468 aa4.52□□□□□ -1.69
HMGB3P21-201ENST00000452483 ZNF365Q70YC5 407 aa4.52□□□□□ -1.69
HMGB3P21-201ENST00000452483 TRABD2AQ86V40 505 aa4.52□□□□□ -1.69
HMGB3P21-201ENST00000452483 LDHDQ86WU2 507 aa4.52□□□□□ -1.69
HMGB3P21-201ENST00000452483 PROSER1Q86XN7 944 aa4.52□□□□□ -1.69
HMGB3P21-201ENST00000452483 IGDCC3Q8IVU1 814 aa4.52□□□□□ -1.69
HMGB3P21-201ENST00000452483 TRIM48Q8IWZ4 208 aa4.52□□□□□ -1.69
HMGB3P21-201ENST00000452483 MCEMP1Q8IX19 187 aa4.52□□□□□ -1.69
HMGB3P21-201ENST00000452483 PHC2Q8IXK0 858 aa4.52□□□□□ -1.69
HMGB3P21-201ENST00000452483 ZCCHC7Q8N3Z6 543 aaKnown RBP4.52□□□□□ -1.69
HMGB3P21-201ENST00000452483 TC2NQ8N9U0 490 aa4.52□□□□□ -1.69
HMGB3P21-201ENST00000452483 NETO2Q8NC67 525 aa4.52□□□□□ -1.69
HMGB3P21-201ENST00000452483 PLEKHO2Q8TD55 490 aa4.52□□□□□ -1.69
HMGB3P21-201ENST00000452483 TEKT4Q8WW24 435 aa4.52□□□□□ -1.69
HMGB3P21-201ENST00000452483 ARHGAP45Q92619 1136 aa4.52□□□□□ -1.69
HMGB3P21-201ENST00000452483 EEF2KMTQ96G04 330 aa4.52□□□□□ -1.69
HMGB3P21-201ENST00000452483 FBXL20Q96IG2 436 aa4.52□□□□□ -1.69
HMGB3P21-201ENST00000452483 SAMD8Q96LT4 415 aa4.52□□□□□ -1.69
HMGB3P21-201ENST00000452483 CAMK1GQ96NX5 476 aa4.52□□□□□ -1.69
HMGB3P21-201ENST00000452483 PARK7Q99497 189 aaKnown RBP4.52□□□□□ -1.69
HMGB3P21-201ENST00000452483 PLIN2Q99541 437 aa4.52□□□□□ -1.69
HMGB3P21-201ENST00000452483 PKP2Q99959 881 aa4.52□□□□□ -1.69
HMGB3P21-201ENST00000452483 SEMA3CQ99985 751 aa4.52□□□□□ -1.69
HMGB3P21-201ENST00000452483 SIKE1Q9BRV8 207 aa4.52□□□□□ -1.69
HMGB3P21-201ENST00000452483 TPPP3Q9BW30 176 aa4.52□□□□□ -1.69
HMGB3P21-201ENST00000452483 MOV10L1Q9BXT6 1211 aaKnown RBP4.52□□□□□ -1.69
HMGB3P21-201ENST00000452483 IMPG2Q9BZV3 1241 aa4.52□□□□□ -1.69
HMGB3P21-201ENST00000452483 FAM83DQ9H4H8 585 aa4.52□□□□□ -1.69
HMGB3P21-201ENST00000452483 TMEM206Q9H813 350 aa4.52□□□□□ -1.69
HMGB3P21-201ENST00000452483 SYNPO2LQ9H987 977 aa4.52□□□□□ -1.69
HMGB3P21-201ENST00000452483 LRRC40Q9H9A6 602 aa4.52□□□□□ -1.69
HMGB3P21-201ENST00000452483 FBRSL1Q9HCM7 1045 aaKnown RBP4.52□□□□□ -1.69
HMGB3P21-201ENST00000452483 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.52□□□□□ -1.69
HMGB3P21-201ENST00000452483 XPR1Q9UBH6 696 aa4.52□□□□□ -1.69
HMGB3P21-201ENST00000452483 DNAJB11Q9UBS4 358 aa4.52□□□□□ -1.69
HMGB3P21-201ENST00000452483 MALT1Q9UDY8 824 aa4.52□□□□□ -1.69
HMGB3P21-201ENST00000452483 DBR1Q9UK59 544 aaKnown RBP4.52□□□□□ -1.69
HMGB3P21-201ENST00000452483 ITGA11Q9UKX5 1188 aa4.52□□□□□ -1.69
HMGB3P21-201ENST00000452483 MKLN1Q9UL63 735 aa4.52□□□□□ -1.69
HMGB3P21-201ENST00000452483 CCPG1Q9ULG6 757 aa4.52□□□□□ -1.69
HMGB3P21-201ENST00000452483 PLA2G2DQ9UNK4 145 aa4.52□□□□□ -1.69
HMGB3P21-201ENST00000452483 LIPGQ9Y5X9 500 aa4.52□□□□□ -1.69
HMGB3P21-201ENST00000452483 SPACA6W5XKT8 324 aa4.52□□□□□ -1.69
HMGB3P21-201ENST00000452483 ACEP12821 1306 aa4.51□□□□□ -1.69
HMGB3P21-201ENST00000452483 FAM90A7PA6NKC0 464 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms